Alligator mississippiensis (American alligator): 102566603
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Entry
102566603 CDS
T03087
Symbol
TAF2
Name
(RefSeq) TATA-box binding protein associated factor 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102566603 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102566603 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102566603 (TAF2)
03036 Chromosome and associated proteins [BR:
amj03036
]
102566603 (TAF2)
Peptidases and inhibitors [BR:
amj01002
]
Metallo peptidases
Family M1
102566603 (TAF2)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102566603 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
102566603 (TAF2)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102566603 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
SR-25
Motif
Other DBs
NCBI-GeneID:
102566603
NCBI-ProteinID:
XP_006263414
LinkDB
All DBs
Position
Un
AA seq
1199 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPNVEGSMAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFID
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKQELDQIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSSVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQEEAILALE
KFPTPASRLALTDILEQEQCFYRVRMMACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
SCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLKAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWL
LTMVQNDPVPYVRHKILEMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVANNQEPVISANNGQSM
GFQSTEDDHPVKETATSISSHQQGVKRKADMPLGSPLEPGQILEKNEDSKVKLKIRFSNS
QEEEEVDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSGEINMHPVSATPLSIFSKESNSS
KHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDNKEKDKEPFGFSNSPASGRSIRSPSLSD
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaagaaaggagacaaggggttcgaaagcccaagaccctataaattaacccac
caggtagtttgtatcaacaacatcaattttcagaggaagtctgttgtaggttatgtggaa
ctgacaatatttcccacagttgcaaacctgaacagaatcaaactgaacagtaaacaatgc
aggatatacagagtaagggtcaatgatctggaagcagcttttatctataatgatccaaca
ctggaggtttgtcaccacgagtcaaagcagcggaatctcaactatttttccaatgcctat
gctgctgcagtcagtgctgtggacccagatgctggaaatggagaactctgcattaaggtt
ccgtcagagctgtggaagcatgttgatgagttaaaagtcctaaaggtgcacataaatttt
tctctggatcagccaaagggaggtcttcattttgtcgtgcccaacgtggaaggtagcatg
gcagagagaggagctcatgttttttcctgtggctatcaaaattctaccagattttggttt
ccttgtgttgattcatactctgaactgtgtacgtggaaactggaatacacggtagatgct
gcaatggtggctgtttcaaatggagatttggtagaaacagtgtatacccatgatatgaga
aagaagacctttcattatatgttgactattccaactgcagcttctaacatctcactggcc
ataggaccttttgaaattcttgttgatccatacatgcatgaggtaactcacttttgttta
ccacaacttctcccattgctcaaacacactacatcataccttcatgaagtttttgaattc
tacgaggagatccttacatgccggtatccttactcctgtttcaagactgttttcatagat
gaagcatatgttgaagtagctgcttatgcctccatgagtatttttagcacaaacctttta
cacagtgcaatgattatagatgagactccgctaaccaggagatgcttagctcaggccctg
gcccagcagttttttggctgcttcatatccagaatgtcctggtcagatgagtgggtctta
aagggaatctctggatatatttatggtctttggatgaaaaaaacctttggtgttaatgaa
tatcgccactggattaagcaggaactagatcaaatagtggcatatgaactgaagactggt
ggagttttactgcatccaatatttggaggaggaaaagaaaaagacaaccctgcatcgcat
ctacatttttctataaaacaccctcacacattgtcctgggaatactacactatgttccag
tgtaaagcccatcttgttatgagactgatagaaaacaggatcagcatggagttcatgcta
caagttttcaacaagctgttgagtctggccagcactgcatcgtctcagaagttccagtca
cacatgtggagtcaaatgttggtttccacatctgggtttttgaaatccatctctaatgtc
tctggcaaagacatccagcctttaataaagcaatgggtcgatcagagcagtgtggtaaaa
ttttacggtagttttgcatttaataggaaacgaaatgtattggaattggaaataaagcaa
gactacacgtctcctgggacccagaaatatgtgggtcctcttaaagtaacagtgcaagaa
ctagatggatctttcaaccacacgttgcagatagaggagaacagtctcaaacatgatata
ccctgccattccaaaagcaggagaaataagaaaaaaaagattccactgatgaatggagaa
gaggtagacatggatctttctgcaatggatgctgattctcctttgctctggataagaata
gaccccgacatgtctgtacttaggaaagtagaatttgaacaagctgacttcatgtggcaa
taccagcttcgatatgagagagatgtagttgcacaggaagaagccattttggcactggaa
aaattcccgactccagcatcacggcttgcattaactgatatattagaacaagaacagtgt
ttctaccgagtaagaatgatggcctgcttctgtcttgcaaagattgcaaattccatggta
agtacatggacgggaccaccagccatgaagtcactctttacccgaatgttttgttgtaag
agttgtccaaacattgtgaagaccaacaacttcatgaatttccagagctactttctacaa
aagactatgcctgttgctatggccttgctgagagatgttcataacctctgtcctaaagag
gttttaacatttattttagatctaatcaagtacaatgacaacaggaaaaataagttttca
gataattactatcgtgctgaactgatagatgcattagccaactctgtaactcctgcggtc
agcgtgaacaatgaagtccgaactctggataacttaaatcctgatgttcgactcattctt
gaggagattacgcggttcttaaatatggaaaagcttctgcccagttacagacacactatt
acagtcagctgtctgaaagccattcgtgtgctacagaagaacggccatgtcccaagtgat
cctgctctctttaagtcgtatgctgaatatggacactttgtggacatccgaatagcagca
ctggaagcagttgttgattacacaaaagttgataggagctatgaggaactacagtggcta
cttactatggttcagaatgaccctgtgccttatgtaaggcataagattttggaaatgttg
acaaagaatccaccatttacgaagaatatggagtctcccttgtgcaatgaagccttagta
gatcagctttggaaacttatgaattcaggtacttcacatgactggaggttacgatgtggt
gctgtagacctgtacttcaccctttttggccttagtagaccttcctgtttgccattacca
gagcttggactggtccttaatctgaaagaaaagaaagctgtacttaatccaaccatcatt
cctgaatcagtggcaaacaatcaggaacctgtcatcagtgctaacaatggacagtcgatg
gggtttcagagcactgaggatgatcatcctgttaaggaaacagcaaccagtatttctagc
catcagcagggggtgaaaagaaaggctgatatgccacttggatccccgctggaaccgggg
caaatactagagaagaatgaagacagtaaagtcaaactcaaaatcagattctcaaactcc
caggaagaggaagaagttgatatggacactgttcacgatagtcaagcttttatttaccat
catttgaacatgctggagagaccatcaacaccaggtaaggaacagtcttctggagaaatc
aacatgcatccagtttcagcaactccgctctctatctttagtaaagaatcaaactcctca
aaacatagtgaccatcaccaccaccatcaccacgaacacaagaaaaagaagaaaaaacac
aaacataaacataagcataaacataagcatgacaataaagagaaagacaaggagcccttt
ggtttctccaatagcccagccagtgggcggtcaattcgttctccatcgctttcagactga
DBGET
integrated database retrieval system
