KEGG   Alligator mississippiensis (American alligator): 102566619
Entry
102566619         CDS       T03087                                 
Symbol
ZMAT5
Name
(RefSeq) zinc finger matrin-type 5
  KO
K13152  U11/U12 small nuclear ribonucleoprotein 20 kDa protein
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102566619 (ZMAT5)
Spliceosome [BR:amj03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    102566619 (ZMAT5)
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_4 zf-U1 zf_CCCH_4 zf-CCCH_9 zf-CCCH_2
Other DBs
NCBI-GeneID: 102566619
NCBI-ProteinID: XP_014449089
LinkDB
Position
Un
AA seq 183 aa
MGKRYFCDYCDRSFQDNLHNRKKHLNGVQHLRAKKVWYDLFRDAAAILQEEQSKKPCRKF
LQTGQCDFGSNCRFSHMTEMDLERLSAQVHGPNFLWKSFGKTEEERRSKEQRQEGADVPV
GTVEEWLEKRAKRLRLAQSNSPLPEKPSMFQYPPGWPPIQDLPPSLQAPPPRGWPIPANL
QWG
NT seq 552 nt   +upstreamnt  +downstreamnt
atgggtaaaaggtacttctgtgattactgtgaccgatcctttcaagacaacttgcacaac
aggaagaaacacctgaatggggtgcagcacctgcgagccaagaaggtttggtatgatctg
ttccgagatgctgctgctattctgcaggaggagcaaagcaaaaagccctgcaggaaattt
ctacaaacaggccagtgcgattttggatccaactgtagattctcccacatgaccgagatg
gacctggagagactgagtgcacaggtgcatggaccaaactttctttggaagtcatttggg
aagacagaagaggagcggagatcaaaggagcagcggcaggaaggagcagatgtcccagtt
ggtacagtcgaagagtggctagagaagagagcaaagaggctgaggttggctcagagtaac
agccctctgcctgagaaaccatctatgtttcagtacccgcctggctggcctccaatacaa
gaccttcccccatcccttcaggccccgcctcctagaggctggccaatcccagccaacctt
cagtgggggtga

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