KEGG   Alligator mississippiensis (American alligator): 102566770
Entry
102566770         CDS       T03087                                 
Symbol
RBM5
Name
(RefSeq) RNA binding motif protein 5
  KO
K13094  RNA-binding protein 5/10
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102566770 (RBM5)
Spliceosome [BR:amj03041]
 Complex A
  Other components
   Complex A specific factors
    102566770 (RBM5)
SSDB
Motif
Pfam: G-patch OCRE RRM_1 Zn_ribbon_RanBP G-patch_2 DUF7066 GSIII_N zf-C2H2_4 zf-C2H2
Other DBs
NCBI-GeneID: 102566770
NCBI-ProteinID: XP_014453813
LinkDB
Position
Un
AA seq 860 aa
MGSDKRSDHCYTSVILDCFISTCSLYCVSRTERSGRYGSIVDRDDRDDRDSRSRRRDYDY
KRSNEERRSERYDDYRDYDSRDRDYDSRDYETRDYDSRDYDSPERERDSERERRNSDKSE
DGYHSDGDYGEHDYRNDINDEKESKTIMLRGLPITVTENDIRELIESFEGPQPADVRLMK
RKTGVSRGFAFVEFYHFQDATSWMEANQKKLVIQGKQIAMHYSNPRPKFEDWLCNKCCLY
NFRRRLKCFRCGADKFDSEQEVPPGATEAVQSVDYYCDTIILRNIAPHTVVESIMTALSP
YASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLQPPLKIDGKTIGVDFA
KSARKDLLLPDGNRVSAFSVASTAIAAAQWSSTQPQTGEGGTIDYSYLQPGQDGYTQYAQ
YSQDYQQYYQNQAGVLDTDGTTISGAPVTTTTAAVVSQSPQLYSQQNNSSDSQTPAAQPS
TSTQAQSTSPTGVVPGTKYAVPDTSTYQYDESSGYYYDPITGLYYDPNSQYYYNALTQQY
LYWDGEKETYVPAADSVTYQQTLNATTTKEVKEKKEKPKSKTAQQIAKDMERWAKSLNKQ
KENFKNSFQPLSSREEERKESAAADAGFALFEKKGTLSERQQIMAEVVKNGEEENPLKRG
LVAAYSGDSDNEEDLLERMENEEEKLTDWKKMACLLCRRQFPNKDALIRHQQLSDLHKQN
MDIYRRSKLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKVYDAGTVNYEQ
PTKDGLDNSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRMRGAGLGAKGSSYGVST
ADSYKDAVRKAMFARFTEME
NT seq 2583 nt   +upstreamnt  +downstreamnt
atggggtcggacaagcgctctgatcattgttacacatctgtcatcttagattgttttatt
tccacatgtagcttatactgtgttagtagaactgaacggagtggacgatatggctctatt
gtcgatagagatgatcgggatgatcgggactccagaagcagacgaagagattacgactat
aagagatctaatgaggagcgcaggagcgagagatatgatgactacagggactatgacagt
cgggacagggactatgacagtcgggactatgaaaccagagactatgacagccgggattat
gacagccctgagagggaacgtgacagtgagcgtgagcgaaggaacagtgataaatcagaa
gatggataccattctgatggagactatggagagcatgactacagaaatgacattaatgat
gagaaggaaagcaagaccattatgttgcgtggccttcctatcactgttacagaaaatgat
attcgagagctcattgagtcctttgaaggtcctcagcctgcagatgtgaggctgatgaag
agaaagacaggtgtaagccgtggtttcgccttcgtggagttttatcactttcaagatgct
accagctggatggaagccaatcagaaaaagctagtgattcaggggaagcagattgcaatg
cactacagcaaccccaggcctaaatttgaagattggctttgtaacaagtgctgcctttac
aacttcaggagaagactaaaatgcttccgctgtggagctgataaatttgactcagaacag
gaggtacctcctggagcaacagaggctgttcagtctgtggattactactgtgataccatc
attctccgaaacatagctcctcacacagtagtggagtccatcatgactgcactatctcca
tatgcttctctggcagttaataacattcgccttattaaagacaagcagacccagcaaaac
aggggctttgcatttgtccagctgtcttctgcaatggatgcatctcaactgttgcagatt
ttacaaagtcttcagccaccgttgaaaatagatggcaaaacaattggtgttgattttgca
aagagtgccagaaaagatttgcttctcccagatggtaaccgggtgagcgccttctctgtg
gcaagcacagccattgctgcagctcagtggtcatccacccagcctcagactggagaagga
ggcaccattgactatagctacctccaaccagggcaggatggctacacccagtacgctcag
tactcgcaggattatcagcagtactaccagaaccaagcaggcgtattggacacagatgga
actaccatatcaggtgctccagttaccaccactacagctgctgtggtatcccagagtcct
cagctatacagtcaacaaaacaattcatctgactctcagacaccagcagctcagccaagc
actagcacacaggcacaatcgacttccccaactggtgtggttcctggcaccaaatatgct
gtccctgacacctctacgtaccaatatgatgagtcttcaggttattattatgatcctata
acaggactctattatgatcctaactctcagtattactacaatgccctgacccaacaatat
ctttactgggatggtgagaaagagacatatgtgcctgctgctgacagtgtaacttaccag
caaacacttaatgcaactaccaccaaagaagtgaaggagaagaaagagaaacctaagagc
aaaacagctcagcagattgctaaagacatggagcgttgggcaaagagtttgaataaacaa
aaagaaaattttaagaatagctttcagccgctcagctccagggaggaggagaggaaggaa
tctgcagctgcagatgctggctttgccctctttgaaaaaaagggtaccttgtctgaaaga
cagcagatcatggcagaggtggtgaagaatggagaagaggagaaccctcttaaacgtggt
ttagtggctgcctacagtggagatagtgataacgaggaggacttgttggaaagaatggaa
aatgaggaagagaaactgacagactggaagaagatggcttgtctgctatgtaggaggcag
tttcctaacaaagatgctctgatccggcatcagcagctttcagacctacataagcaaaat
atggatatctataggagatcaaaactgtcagagcaggaacttgaagccttggagttgcgt
gagagagagatgaaatacagagacagagctgcagaacggcgagagaaatatggcatcccg
gagcccccagagccaaagcgcaagaaagtgtatgatgctggcacagtgaattatgagcag
cctaccaaagatggccttgataatagtaatattggcaacaaaatgctccaggccatgggc
tggagggaaggttcaggattgggaaggaaatgtcagggtatcacagctcccattgaggct
caagtacgcatgaggggagctggcttgggagccaagggtagttcctatggtgtttctact
gcagactcatacaaggatgcagttcggaaagctatgtttgcccgcttcacagagatggaa
tga

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