Alligator mississippiensis (American alligator): 102566850
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Entry
102566850 CDS
T03087
Symbol
FREM2
Name
(RefSeq) FRAS1 related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102566850 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
amj04091
]
102566850 (FREM2)
Lectins [BR:
amj04091
]
C-Type lectins
Lecticans
102566850 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
UPF0239
Motif
Other DBs
NCBI-GeneID:
102566850
NCBI-ProteinID:
XP_014460284
LinkDB
All DBs
Position
Un
AA seq
3112 aa
AA seq
DB search
LANRGLRVPLGRRAWLDPLTDLVLRVQPGDRCTVTVLDADPTWRRPGRLSPARFPCDFGA
GQVKYWHLGGRSPARDRLRLRLRYDAPGRAAVLPLVLDVQVVFAQLRLVTRNLPLAVERL
RGPSDALDARSLAFAFQPGQRCRVGLLPGLGGLPRYGHLTPPAAALQRALPPRREDEEED
GLPQPATWWECEEFLRLGLRYWHTAPGASPDRDLVPLVAELRAPGEPLQREHFQVLVRIR
AGTENAAPKPSFVAMLMMEVDQFVLTALTPDMLAAEDAESPADLLLFNVTSPLGPGQGCL
VSTDDRSLPVTTFSQRDVQELRIAYQPPSQDSERERLFELELEVLDPEGAASEPFAFMIV
VKPMNTLAPVVTRNTGLLLYEGQSRPLAGPATEPSLVISDEDDLEQVRVSVVAGLRHGHL
VLVEEHGMGKPQAAAAAPRKHFTVAELEAGRIIYQHDGSESPLNDNLVLRLEDSGARHCV
EFLFPITLVPADDQPPLLNANTGLDLAEGDMVPIPTRALSATDIDSDNAVLQFVLESGPS
AGQLLLRQDQPPPGWEEEGGRSHWQRVPGLLGGPPVYERPVNEWLQQDVVEGHLFYRHLG
SHSPGPGVVLDQFTFRVQDDNDPPNRSGPQSFVIRVHPVDRLPPELFSGSSLHLVVAEQQ
VTPLQRKHLRYTDQDSGDRELRYTVTQPPTDTDTNHPQGVRLGSLVLTDDHSVEVTHFTQ
AQINHHKISYQPPQEELGVAPRLAQFRYLVEDVAGNAAEGTFTIYLQPVDNQPPAITNTG
FTVPEGGSHVLSLNELDARDTDTEPNHLRFILTQAPWYGQLQLSGHRLPMGATFGLEDIR
QGRVAYTHSGAESSGDVCSLDVSDGVHAVPIVLKVTVHPVDDEVPTLRLPPGTLGSYLDV
LENGAAEITTNVIQGTDEDTDDLMLTFIVEDPPQHGDILVHGVPAERFSQRDVLDGAVVF
AHTGGEIGLLPKEDAFNLTLSDMSEEWSIGGNIVQGVSVLVTILPVDSQAPEIFVGEHFM
VVEGDKRVITSSHLRTEDMDTPTDDILYTIVAQPTSGYVENISPAPGSEKSRAGTAISAF
TFKDLRQGHIYYVQSIHKGVEPIEDRFTFRCSDGINFSERHFFPIVIIPTNDEEPEIFMR
EFVVMEGMSLVIDTPILNAVDGDIPADELTFTITRFPRHGHILNQLINGTVLVESFTLDQ
ITESSSIMYEHDDSETKEDSFVVKLSDGKHTAEKTVLIMIIPVDDETPRMTINDGLEIEI
GETKIIHNRILKATDLDSEDKTLTYIIRYGPRQGLLQRIKPLGEVQNITLGMNFTQDEVD
RNLIRYVHLGQEGIRDLIKFDITDGINPFIDRYFYVTIGNTDMVFPDVISKGVSLKEGGR
VTLTTDLLSTSDLNSPDENLVFTITRPPVRGHLECTDQPGVRITTFTQLQLAGNKIYYIH
TSEDEVKMDSFEFEVTDGYNPVFRTFRISISDVDNKKPVVTIHNLVMSENENKLITPFEL
TVEDRDTSDTLLKFIITQVPVHGQVMFNNTKPVTSFSKQDLNENLISYKHDGTESTEDSF
SFTVTDGTHTDFYVFPNTVFETRRPQTMKIQIMSVDSSVPQVIINKGAPTLRVLATGHLG
FMITNKVLKVEDRDSLHVTLKISITEAPRHGFLIHLGKGNHSINQFTQADVDDMKICYIL
REGDNATSDIFYFSVEDGGGNKLKGQHFRLNWAWISLEREYYLVNEDSKYLDVILKRRGY
LGETSFISISTRDGTAEKDKDFKGKAQKQVQFNPGQTLATWRVRILSDGEHEQSETFQIV
LSEPVMAVLEFPEVATVEVIDPGDESTVFIPQSVYTIEEDIGELFIPVRRSGDVSQELMV
ICYTQQGTATGTVPTSVLSYSDYISRPEDHNSIIRFDKDEREKMCRIVIIDDSLYEEAET
FDVLLSMPMGGRIGSEFPGTQITIVPDKDDEPAFYFGDDEYYVDESAGFIEVHVWRTGTD
LSKSATVTVRSRKSEPVTAEAGVDYVGISRNLDFAPGVNMQTFRVVILDDLGQPVLEGVE
KFELVLRMPMSATLGEPSKATVFINDSVSDLPKMQFKEPVYTGNENDGEISAMIYRSGDT
RYTSTVRCYTRQGSAQVMMDFEERPNTDSSTITFLPGETEKPCTLVLMDDTVHEEEEELR
LVLGTPQSDSFFGASVGEQNETLIRIRDHADKAIIKFGETKFSVSEPKDAGELAVVKIPV
LRLGDTSKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGETQHFVNIEILFDGVREMREA
FTIHLKPDENMVAEIQTTKAIVYIEETNSMADVTFPSIPQVVSLLIYDDTSRTKERINPV
AGYPVVCITACNPKYADYDKTGSICVSENINNTLTHYRWLVSAPTGSDGVTSPMREVDFD
TFFTSSKLITLDSIYFQAGSRVQCAARAVNSDGNEGLELMSPIVAISMDEGLCQPRISGV
VGAEPFSAKLRYTGPEDPDYTNLIKLTVTMPHIDGMLPIISTRELSNFELTLSPDGTRVG
NHKCSNLLDYTEVKTHHGFLTDATKNPDVIGETIPYQYSATIRGSNTLRFYRNLNLEACL
WEFVSYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDL
QSELRLTFVYDTAILWKDGIGSPPEAELQGSLYPTSMRISEEGRLVVNFKTEARFHGLFV
MSHQASSLSSMVMSADHPGLTFSLSLVRSEPTYNQPIQQWSFVSDFAVRDYSGTYTVKVI
ACTTAPHQEYSLPVICNPQEPITFDLDIRFQQVSDPVAAEFSLNTQMYLLSKKNLWLSDG
SMGFGQESDVAFTEGDIIYVRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYNPPDTE
YGCLADSPSLLYRFKIVDKAQPETQATSFGDVLFNAKLAIDDPEAIPLVNQPGADGFKVD
STPLFQVSLGREWYIHTIYTVRSKENANRGIGKRSVEYKYHSVISGGNSVQIRQKRGVKE
SPELAKEIGRENNRGTNIQHIALDRTNKKQIPQREVTVSGILPRELNNRTPEVNIVTIIG
GVAAVFLTICLAAIIILLLKHKENSEKEAAKESGSSEPMMPPHNYTSDSSEV
NT seq
9339 nt
NT seq
+upstream
nt +downstream
nt
ctggcgaaccgcgggctgcgggtgccgctgggccggcgcgcctggctggacccgctgacc
gacctggtgctgcgggtgcagccgggcgaccgctgcaccgtgacggtgctggacgccgac
ccgacgtggcgccgcccgggccgcctcagccccgcgcgcttcccctgcgatttcggcgcg
gggcaggtgaagtactggcacctgggcgggcgcagcccggcccgcgaccgcctgcgccta
cgcctgcgctacgacgctcccggccgcgccgcggtgctgcccctggtgctggacgtgcag
gtggtcttcgcgcagctgcgcctcgtcacccgcaacctgccgctggccgtggagcgcctg
cggggccccagcgacgcgctggacgcccgcagcctggccttcgccttccagccgggccag
cgctgccgcgtgggcctgctccccggcctgggcgggctgccccgctacggccacctcacg
ccgcccgccgccgccctgcagagggccctgccaccccgccgcgaggacgaggaggaggac
ggcttgccgcagcccgccacctggtgggagtgcgaggagttcttgcgcctgggcctgcgc
tactggcacacggcgcctggcgcctccccagaccgcgacctggtgccgctggtggccgag
ctgcgggcccccggggagccactccagcgggagcacttccaggtgctggtgcggatccgg
gcaggcaccgagaacgcggcgcccaagcccagcttcgtggccatgctcatgatggaggtg
gaccagttcgtgctgaccgccctgacgcccgacatgctggcggccgaggatgccgagtca
cccgccgacctgctgctcttcaatgtcacctcgcctctgggccccgggcagggctgcttg
gtgagcacagatgaccggagcctacctgtgaccaccttcagccagcgggacgtgcaggag
ctgcgcatcgcctaccagccaccctcgcaggactcagagcgcgagcgcctctttgagctg
gagctggaggtgctggaccctgagggtgctgcctcggagccctttgccttcatgattgtg
gtgaagcccatgaacacgctggcacccgtcgtcacccgcaacacagggctgttgctctat
gaggggcagtcacggccgctggccgggccagccaccgagcccagcctggtcatcagcgat
gaggatgacctggagcaggtgcgggtgagcgtggtggcagggctgaggcatggccacctt
gtcctggtggaggagcacggcatgggtaagccccaggctgcagctgctgcacctcgcaag
cacttcaccgtggcagagctggaggctggaaggatcatctaccagcatgacggcagtgag
tcaccgctcaatgacaacctggtgctgcggctggaggacagcggcgcccggcactgtgtt
gagtttcttttccccatcaccctggtgcctgctgatgaccagccaccccttcttaatgct
aacactggattggacctggcggagggcgacatggtgcccatccccacacgtgccctcagc
gccaccgacattgactcggacaatgctgtgctgcagtttgtactggaatcaggcccctct
gcagggcagctgctgctccgccaggatcagccaccccctggctgggaggaggagggtggg
agatcccactggcagagggtgccaggcctgcttggggggcccccagtatatgaaagacca
gtgaatgagtggctgcagcaagacgttgtggagggccatctcttctaccggcaccttggg
tcccacagccccggccctggggtggtgctggatcaattcacctttagagtgcaggatgac
aatgacccacccaaccgctctgggccacagagctttgtgatccgggttcacccggtggac
cggctacccccagaactgtttagtggcagcagcctgcacctagtggtggcagagcagcag
gtgaccccgctgcagaggaagcacctgcgctacacagaccaggactctggggaccgggag
ctgcgctatactgtcacccagccccccactgacactgacaccaaccacccccagggggtc
cgtctggggtccctggtgctcactgacgaccactcggtggaggtgacccatttcacccag
gcccagatcaaccaccacaagatttcctaccagcccccgcaggaggagctgggggtggct
ccccgcctggcccagttccgatacctagtggaggatgtggctggtaatgcagctgaaggc
actttcacgatttacctgcagcctgttgacaaccagccacctgcaatcaccaacactggc
ttcactgtgcctgaaggaggcagtcatgtcttgagcctaaatgagctggatgccagggac
acggacactgagcccaaccatctccggttcatcctgacccaggctccttggtacgggcag
ttgcagctctctgggcacagattgcccatgggagcaacctttggccttgaggatatcaga
caaggcagggtggcttatacacacagtggggcagagtccagtggtgatgtttgcagcctg
gacgtgagcgatggggtccatgcagtccccattgtgttgaaggtgactgtacaccctgtg
gatgatgaggtgcccactttaagactacccccaggcacccttggttcctacctggatgtg
ttggagaatggtgctgctgagatcaccactaatgtcatccaaggcacagatgaagataca
gatgacttgatgctgactttcattgtggaggatcctcctcagcatggggacatcctggtt
catggggtgcctgcagagaggttttcccagagggatgtgctggatggggcagtggtgttt
gctcacactggtggtgaaataggactgctccccaaagaagatgccttcaacctcaccctg
tccgacatgtctgaggagtggagcattggaggtaatattgttcagggggtgtcagtcctg
gtgaccattctccccgttgacagccaagccccagaaatttttgtgggggaacatttcatg
gtggtagagggtgacaaaagggttattacatcctctcatctaagaactgaggatatggac
actccaactgatgatatactgtacaccattgttgctcagcccacctccggttatgtagag
aacatctctccagccccgggatcagaaaaatcgagagcaggtacagccataagtgccttc
acttttaaagacctcagacaaggacatatttattacgttcaaagcatccataagggggtg
gaacctattgaagacaggttcactttccgctgctctgatggcattaacttttctgaaagg
cacttcttccctattgtcatcatcccaaccaatgatgaagaacccgaaatctttatgcga
gagtttgttgtcatggaaggcatgagcctggttattgatactcccatcctcaatgcagta
gacggggacatccctgctgatgagctgacgttcactatcaccaggtttcccaggcatggc
cacatcttgaaccagctgatcaatgggacagtcctagtggagagctttaccctggatcag
ataactgagagctccagcatcatgtatgaacatgatgactctgagacaaaggaagacagt
tttgtggtaaaactctcagatggtaaacatactgcagagaaaactgtgctcatcatgatt
attccagtagatgatgagacacccagaatgaccatcaatgatggactggaaattgaaatc
ggggaaacaaaaattattcacaacagaatcctgaaagctactgatctagattctgaagac
aaaactttgacttacattataaggtatgggccaagacaagggctcttacaaagaataaag
cctttgggtgaggttcagaatatcacactgggaatgaactttacccaagatgaagtggac
agaaacttaattcggtacgtgcatttgggccaagagggtattcgggatctcatcaagttt
gatataacagatggcataaatcctttcattgaccgctacttttatgtgaccattggcaac
actgatatggtctttccagatgtgattagcaaaggggtttccctgaaggaaggggggaga
gtaacacttactacagacttgctgagcaccagtgacttgaacagcccagatgagaacttg
gttttcactattaccaggccacccgttcgtggtcatcttgaatgcacagaccagcctggt
gtacgcatcacaacctttactcagcttcagttggcaggtaataaaatttactacattcac
acttcagaagatgaggtgaaaatggatagttttgagtttgaagtgaccgatggttataat
ccagtgtttcgcaccttccgtatttccattagtgatgtggacaacaaaaagccagtggtc
acaatacataatctggtaatgagtgaaaatgaaaataagctgatcacaccttttgagttg
actgtggaggacagagatacatctgatacattgctaaaatttatcatcacccaagtacca
gttcatggtcaggttatgttcaataacaccaaaccagtcacatcctttagcaaacaagat
ctgaatgaaaatcttatcagctacaagcatgacggcacagagtccactgaagacagcttc
tctttcacagttacagatggcacccacactgacttttacgtcttccccaacactgtattt
gaaacaagaagaccccaaacaatgaaaattcagataatgtctgtggacagtagtgtacct
caggttataataaacaaaggagccccaactctccgtgtattagccactggccacttgggt
tttatgattaccaacaaagtgctcaaagtggaagacagagacagcttgcacgttaccctc
aagatcagcatcacggaggcccctcgccatggcttcctgattcaccttggaaaaggcaac
catagtatcaatcagttcacacaagctgatgtagatgacatgaagatatgctacatttta
agagaaggtgataatgcaacaagtgacattttctacttttctgttgaagatggtggaggc
aataagcttaagggtcagcattttcgattgaactgggcctggatctccctagagagagaa
tattacttggtaaatgaagactcaaaatatctagatgtcattcttaaacggagaggttac
ttgggagaaacttcatttattagcattagcactagagatggtacagctgagaaagataag
gactttaaaggaaaagcacagaagcaagtgcagttcaatcctggccaaaccttagctaca
tggagggtgcggattttgagtgatggtgaacacgagcaatcagagacctttcaaattgtg
ctttctgagccagtcatggctgttctagagtttcctgaagtggctacagtggaggtgatt
gacccgggagatgaatcaactgtctttatacctcagtcagtctacaccattgaagaagat
attggtgaactgttcattccagtcagaagaagtggagacgttagccaggaattaatggtt
atctgctatacccagcaaggcacagcaactggtactgttccaacatctgtgctgtcctac
tctgactacatatccaggcctgaggaccataacagcattatacggtttgacaaggatgaa
agggagaaaatgtgtcgtattgtcatcatagacgattccttgtatgaagaggctgagaca
tttgatgttcttctgagcatgccgatgggtggaagaattggttcagaattcccaggaact
cagattacaatcgtgcctgacaaagatgatgaaccagctttctactttggagatgatgaa
tactatgtagatgaaagtgctggcttcattgaggtgcacgtctggagaacaggaacagat
ctctctaaatctgctactgttacagtgaggtctcgcaaatctgaaccagtaactgcagag
gctggggtagattatgtaggtatcagccgtaatttggattttgcacccggagttaacatg
cagactttccgtgtggtcattctggatgaccttggacagccagtgctagagggagttgag
aagtttgagcttgtgctaagaatgcccatgagtgccacccttggagaaccaagcaaagcc
actgtcttcatcaatgactcagtctctgatttgcctaagatgcaatttaaagagcctgta
tacacaggcaatgaaaatgatggagagatttctgccatgatatacaggagtggggatacc
cgctacacatctacagtgcgatgttacactcggcagggatcagcccaggtaatgatggac
tttgaagagcgtcctaacactgacagttccaccatcaccttcctccctggtgagactgag
aaaccttgcacccttgtccttatggatgatactgtccatgaagaagaagaggagctgcgt
ctggttcttggcacaccacaaagtgattctttctttggtgcttctgttggtgaacaaaat
gaaaccttaataaggatcagagatcacgcagataaggctattattaaatttggagagact
aaatttagtgtaagtgaaccaaaagatgcaggagaactggcagtggtaaaaattccagtg
cttcgtttgggtgatacatcaaaggtctccattgtgagagttcacacaaaggatggctct
gctacatcaggagaagactaccaccctgtgtcagaagaaattgaattcaaggaaggtgaa
acgcagcactttgtgaacattgaaattctttttgatggagttagagaaatgagagaagcc
ttcactattcatctgaagcctgatgagaacatggtggcagagatacagacaactaaggcc
attgtatacattgaagaaacgaacagcatggcagatgttaccttcccctcaatccctcaa
gttgtatcccttttgatatatgatgatacttccagaaccaaagaaagaattaatccggtg
gctggctatcctgttgtctgtatcacagcttgcaatcctaaatatgcagattatgacaag
acaggttcgatatgtgtgagcgaaaatatcaacaacaccctgactcattaccgatggctg
gttagcgcacccactggctctgatggtgtaaccagccccatgagagaagttgattttgat
actttcttcacttcatccaagttaatcacactggactccatttacttccaagcggggtcc
cgggtccaatgtgcagcccgtgctgtgaattcagatggaaatgaaggcctggagctcatg
agccctattgtagcaataagcatggatgagggtctttgccagcctcgtatctcaggagta
gttggagcagaaccattttctgccaagctgcgctatactggcccagaagatcctgactat
acaaatctcatcaagttgactgtcacaatgccacacattgatggcatgctgcccattatc
tctacaagagaactgtccaactttgagttaaccctcagccctgatggaactcgagttgga
aaccacaagtgctctaacctgttggactacacagaagtgaagactcaccatggttttttg
actgatgctaccaaaaatccagatgtgattggagagaccattccctatcaatatagtgca
acgatcaggggctccaataccttacgcttctaccgaaatctgaacttggaagcctgttta
tgggagtttgttagctactatgacatgtctgagctcctcactgattgtggaggcaccatt
ggtacagatggacaggtcctcaacctagtgcagtcctacgtgaccttgcgagtccctttg
tatgtctcatacgttttccattcaccagtgggggtaggtggttggcagcattttgacctt
cagtctgaacttcggctgacttttgtgtatgacactgccatcttgtggaaggatggaatt
ggtagcccacctgaagcagaacttcaaggttctctctacccaactagcatgcgcatcagt
gaagaagggcgcttagttgtcaactttaagactgaagcccgatttcatggcttgtttgtg
atgtctcaccaagcatcttctctgagttccatggtcatgtcagctgatcacccaggccta
acgtttagcctcagcctcgtgcgaagtgagccaacctacaaccaacccatccagcaatgg
agctttgtttcagattttgcggtacgagactattctggaacatataccgtgaaggtgata
gcttgtactactgcacctcatcaagaatatagtctcccagtgatctgcaatcctcaagaa
ccaattacatttgaccttgatattcgattccaacaggtcagtgatccagtggctgctgag
ttcagcttgaatacccagatgtacctcctttctaagaagaatctctggttatctgatgga
tcaatgggatttggacaggagagcgatgttgctttcacagaaggtgatattatatatgtt
cgggtgatggtggatccagtgcagaacttgggtgattccttctactgtagcattgagaag
gttttcctttgtactggagctgatggatatgtacccaagtacaatccacctgacactgaa
tatggttgtttagctgattctccatccctcttatacagatttaagatagtggacaaagct
cagcctgaaacacaagccacaagctttggggatgtcctttttaatgcaaaactagcaata
gatgacccagaagcaattcctttagtcaaccaaccgggcgctgatggatttaaggtagac
tcaactccactgtttcaagtgtctttgggtagagaatggtatatacacacaatctacact
gtaagatcaaaagaaaatgccaaccgaggtattggcaaaagaagtgtggaatacaagtac
cactctgtcatcagtggtgggaattcagtgcagatacgccagaagaggggggtcaaagaa
tctccagaactcgctaaagaaatcgggagagaaaacaacagaggaacaaacattcagcac
atagccctagaccgcaccaataagaaacagattccccagagggaagttactgtcagtgga
attctccccagggaactgaataaccgcaccccagaagtcaacatagtcacaatcattggt
ggagttgcagctgttttcctcaccatctgtttagctgcaatcattattttgctgttaaag
cataaagagaactcagagaaggaagctgcgaaggaatcaggcagtagtgagccaatgatg
ccaccacataattacaccagtgacagctcagaggtttga
DBGET
integrated database retrieval system
