Alligator mississippiensis (American alligator): 102566897
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Entry
102566897 CDS
T03087
Symbol
DMXL1
Name
(RefSeq) Dmx like 1
KO
K24155
rabconnectin-3a
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102566897 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102566897 (DMXL1)
Membrane trafficking [BR:
amj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102566897 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
102566897 (DMXL1)
RAVE complex
102566897 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_EML
Beta-prop_HPS5
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
102566897
NCBI-ProteinID:
XP_019333616
LinkDB
All DBs
Position
Un
AA seq
3045 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSLRARPVTVYASGCDIVVLGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVICIFEPVTLLKQKNNHHTGLHYQWQKTAQILLESIAHNLTW
DPTGTRLLTGSSSLQLWSNVHLEDGNAEKTDAGSGEWRCIWQCKTASQVCLMKFSPDGEF
XXXXGKNDCLVKVWYNTDSWRSAVTPPGATPEKQASEIDFSFVYLSHPRSVNGFSWRKTS
KYMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGEYNHWTEPVNLTNNFKRNASSK
ERMQNALEVNLKHFRRGKRRSGAVTAHTGYSPHQQDPHEVHRNTPLHANALCHFHIAASI
NPATDIPLLPSITSLSLSENEEKSGPFVVHWLNNKELHFSLSMEVFLQQIKKNFEQHSSE
TSTEESNQIDGKSDEEADENVGDQKANQEKKELSDERAVPNSSFVPLSSAAIDHEIEILL
TEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLC
RSIVMYACTKNVDLAIQQGKHKPSGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMMISKH
ADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNALRT
PDVDSTKQINDSLNSGESHLRPQNTGTASVTSQDPNAIYSELILWRVDPVGPLSFSGGVS
ELARINSLHVSAFSNVAWLPTLIPSNCLGAYCNSPSACFVASDGQHLRLYQAIIDAKKLL
CELSNPEISKYVGEVFNIISQQSTARPGCIVELDAITELRGRKTQLLHVFHEDFILNNRE
EKMPGKKNDLSASGNLQNGFSEKFYLIVIEYTQNCSLLHMWNLHLKSIPVSVVEKRASKR
EPETTKHQEELHSSPTDPEKVQSPFTQKYQACKANLQSTSRLTLSSKMVYSQELSLPEGV
EIISVKPSAGHLSSSSIYPVCRAPYLLATLCSDGKVRFWRCRVTESVASSMPEYSDVIYM
WEEWPLLIEDGFLSSSAVNVPGKPIEVSCAHTNRLAVAYKQVVPKNSRFSQDFMINVSIF
ECESTGGSCWILEQTLHLDEIGTTLDSAISIDSNLMEYNKQEVCLSGNGKTPSSTKHLVH
LDWMSREDGSHILTVGIGSKLYMFGQLAGKVQEQNGVESVALPLWETAKVTPLSRFVLLR
CVDLISSVEGSPPCPISLSWVRDGILVVGMDCEMHVYSQWQPPSKQETVATDSYRGSTPS
ITSLMKQSQSAGSGLHPPKRTLTRSMTSLAQKLSGKKTIFDIPMDMEDSGLFEAAHALCP
TLPQYHPFQLLELMDLGKVRRAKAILSHLVKCIAGEVVAVNESESNHDRRLRSLTISASG
STARDPKTFNKTENTDYTEIDSVPPLPLYALLAADDDCSHSCSEKSNHKNNLSKQNDVPD
ENYEDLFQSSSLSTDDLTMFEADEDNTKPKVIDLSQYGPTYFGLEHAQVLSRHLLHSSLP
GLTRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVRLHTFLTTSLPP
VHRAQLLRQGLSTSHFAWAFHSVAEEELLNMLPAMQKGDPTWSELRAMGVGWWVRNIHTL
RRCIEKVAKAAFQRNNDPLDAAIFYLAMRKKAVIWGLYRSQKEAKMTQFFGNNFTEDRWR
KAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLNDIQLALVISRLYESEFEVS
STYKSILQKRILGSSFHGKESSSSIHNDPFLRSMAYWILQDYRRALDTLIKQPIGDDGDG
HTSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDAPSTHICLTVENGLADKINLGERRLFFT
TAYAHLKTGCPMLALEVLSKMPKVVKNSKSFCRTPSLIDSSKDYSPSSPVRLEAQDRSSL
VDGSQPVLNGLGSPSDASSDKQSSSVLSFDWSQPSLVFQDEPLELKWDSDKDEESEDSSL
IMKELKPRPKTSEKLDETSSSYTGSFSALDETDILSPSEDVISAHLKFRACLKILTVELR
TLSTGYEVDGGKLRYQLYHWLEREVVALQKTCDYSAEVEEMKSGISVVDEIALSENTEES
PDQQKAMIQRENFLTRQQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQESQQ
EQSIQIPSSPLREQNSIPLLFACTASAKTVVANPLLHLSNLTHDILHAIIDLDSPPHPDV
QNNKIYVMHTLAASLSACIYQCLCGGHSYSSLQANQFTGTVYQTLLLTQRHSLKAASLDE
TVTPNTPPAQWPGITALIRLLNSAGEEAQPSLTVLLCEILTSVYLSLFINGLATHSSNEL
YRIMAHPLNDKMWSAVFGGGAHISSRGQTQLRTKTVSSPVDDGEKQQKRFRLSSKLSPKE
CPQSPSSPTVEQGSPHYREKFIPPELSIWDYFIAKPFLPSSQSRVEYDSEESQGSDDDEE
EDEEDVFASDSQLQEHSNSNSYSWSLMRLTMIQMVLHNLKTFYPLAGHDLSELPVSSPLC
HAVLKTLQRWEQVLLRRLELYGGPPQNFISVHAPEEALSAGPALLRHKVLLEPTNTPFRS
KSHVALSVKRLWQYLVKQEVIQETFIRNIFTKKRCLSESLEDHSETIKNSMMEEPINNKI
ETDLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDIQELDVSGILATQIYTWVD
DEIETETKGSDDFLVVHARDDLSTVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMLKK
AINNVRRMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSGGNSRVTRMRFNHQGNKF
GIVDADGYISLYQTNWKCCPHTGITPKPYLTWQCHNKTTNDFVFISSSSLIATAGQSTDN
RNICLWDTLVGPANCLVHAFVCHDSGATVLAYAPKHQLLLSGGRKGFTCVLDLRQKQQRQ
LFQSHDSPIKAIAVDPTEEYFVTGSAEGNIKVWSLSTFNLLHTFVNEHARQSIFRNIGTG
VMQIETGPANHIFSCGADGTVKMRILPDRFSPFNEVLKNDVKLML
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacgggggccgtgaaccccggcgaccactgcttctccgtg
ggcagcctccgcgcgcggcccgtcacggtttatgcatcaggatgtgatattgtggtactg
gggactgattttgaaagattacaaataatccctggagcaaaacatggaaatattcaagtg
ggatgtgtggactgttctatgcaacaaggcaagattgcagcttcttatggaaacgttatt
tgtatctttgaaccagttacccttctaaaacagaagaacaatcaccatactgggttacat
tatcagtggcagaagactgctcaaattttactggaatctattgcacataacttaacatgg
gatcctacaggcactcgtctcttgactggttccagctctctgcagctctggtccaatgtt
catttggaagatggaaatgctgaaaaaacagatgctggctcaggggaatggaggtgtatc
tggcaatgcaaaaccgcttcccaagtttgtttaatgaaattttcaccagacggagaattc
ttnnnnnnnnnnggaaagaatgattgtcttgtgaaagtgtggtataatacagatagttgg
cgatcagcagtaacacctccaggtgctactccagaaaaacaagcttcagaaattgatttt
tcatttgtttatttgtcccatcctcgatctgtaaatggattctcatggcggaagacaagc
aagtacatgccacgtggtgctgtgtgtaatgtacttctgacttgctgcaaagataatgtg
tgccgtctgtgggcagagactttgttaccaaatgatagtctattgtatggtggtgaatac
aaccattggactgaaccagtgaacttgaccaataacttcaaaagaaatgcttctagtaag
gaacgaatgcaaaatgccttagaggtaaatctgaaacacttccggcgaggaaagagaagg
tcaggtgcagtcacagcccatactggatactcaccacatcagcaagatcctcatgaagtt
catcgaaacactcctttgcatgcaaatgcactctgccacttccatattgctgccagtatc
aacccagctacagacattcctttactcccttcaatcacgtctttgagtctcagtgaaaat
gaagagaaaagcgggccttttgttgtgcattggctcaacaataaagagctgcatttttcc
ttgtccatggaagtatttttacaacagattaaaaagaattttgaacaacattcttcagag
accagcactgaagagtctaatcagatagatggcaaatcagatgaagaagctgatgaaaat
gtgggagatcaaaaagcaaaccaagaaaagaaggaactgagtgatgaaagagctgttccg
aattcaagttttgttcctttatcttctgctgctattgatcatgagattgaaatactactg
actgaatggagtaaaaatgctgacatgctctttagtattcatcctatggatgggtcattg
ctggtatggcatgtggactggctagatgaataccagcctggtatgtttcgccaggtgcag
gtatcctttgtttcaagaattccagtagcttttccaacaggtgatgcaaattctctttgc
agaagtatagtgatgtatgcttgtaccaagaatgttgacctggctattcaacaaggcaaa
cacaagccatctggtcttacacgctcctcatctatgcttatctcttctggccacagtaaa
tcgaccaacagtttaaaattaagtatcttcactcctaatgttatgatgatttccaaacac
gcagatggttctttgaaccaatggctagttagttttgcagaggaatctgctttttcaacg
gtgctgagtatttcgcataaatcccgatattgtggtcaccgttttcatctaaatgacttg
gcttgtcattcagtactaccattgctgcttacaacctcacatcataatgctttaaggaca
ccagatgttgatagcaccaaacagataaatgactctttaaattctggtgagtctcattta
agacctcaaaatacaggaactgcaagtgtaacatcgcaggatcccaatgccatttacagt
gagcttattctttggagggttgatccagttgggcctttatccttttctggtggagtttct
gaacttgcacgaataaactctcttcatgtttcggcgttttcgaatgtggcatggctgcct
accctcatacctagtaactgtttaggggcctactgcaattctccgagtgcttgctttgtg
gcaagtgatgggcagcatttaagattatatcaagctataatagatgctaagaaacttctg
tgtgagctctccaatcctgaaatttctaaatacgttggtgaagtttttaacatcataagt
caacaatctactgctaggccaggatgcatcgtagagttggatgccattacagaacttcgt
ggcagaaaaacacaacttcttcacgtttttcacgaagacttcattttgaataaccgggag
gagaaaatgcctggaaagaagaatgatttatcagcatctggaaacttgcaaaatggattc
tcagaaaaattttacttaatagtaattgaatatactcaaaactgctcattattacacatg
tggaatttacacttgaagtccattccagtgtcagtcgttgagaagagagcctccaaaaga
gagcctgaaacaacaaagcatcaagaagagctgcattcctcacctacagatccagaaaag
gtccagtctcccttcacacaaaaatatcaggcctgtaaagcaaaccttcaaagcaccagt
cgccttactctctcttcaaaaatggtttatagtcaagagttgagtttaccagaaggagtg
gagataataagtgttaagccatcagcaggacacttgagttcatcttccatatatccggtt
tgtcgtgcaccttatctactagcaactttatgctctgatggcaaagttaggttctggaga
tgtagagtgacagagtcagtagcttcttccatgccagaatatagtgacgttatatatatg
tgggaagaatggccattacttatcgaggatggatttcttagtagtagtgctgttaatgtt
ccaggaaaaccaattgaagttagctgtgcacacacaaatagattagctgttgcatacaag
caggtagtccctaaaaatagtcgcttttctcaagacttcatgattaatgttagtattttt
gaatgtgaatctacaggaggttcatgttggattctggaacagactcttcatttagatgaa
ataggcacaacattagattctgctataagtattgacagcaatttaatggagtataataaa
caggaagtttgtttatctggtaatgggaaaactccatcaagcacaaagcacttggttcac
ttagactggatgtctagagaagatggttcacatatcctaacagtaggcattggatcaaag
ctttatatgtttggtcagctggctggaaaggtgcaagaacaaaatggtgtggagagtgtt
gctttgccactatgggaaacggcaaaagttacacccctttctaggtttgtgttgctacga
tgtgtggacttaatttcttcagtagaaggatcacctccttgtccaatttctttgtcttgg
gttcgtgatggcattcttgtagttgggatggattgtgaaatgcacgtttattctcagtgg
cagcctccttcaaaacaagagacagttgctacagactcttaccgtggaagcacaccatct
ataactagcttaatgaaacaaagccagtcagctggttctggccttcatccaccaaagcga
accttaaccagatccatgaccagccttgcacagaagcttagtggaaagaaaacaatattt
gatatccctatggatatggaggattctggactttttgaagcagcacatgcattatgtccc
actttacctcaataccacccttttcagcttttggagctcatggatcttggtaaagtgcgg
agagcaaaggctatcctatcccatttggttaaatgcattgctggggaagttgttgctgta
aatgaatctgaatctaatcatgatcggcgacttagatctctcacaatcagtgctagtgga
agcactgctagagatcccaagacattcaacaaaacagaaaatacggattacacagaaata
gattctgttccaccactccctttgtatgcactgcttgctgcagatgatgactgttcccat
tcctgttcagaaaagtccaatcataaaaataacttaagtaaacaaaatgatgtaccagat
gaaaattatgaagatctttttcagagctccagtttaagtacagatgatctcaccatgttt
gaggcagatgaagataatacaaaaccaaaggtcattgatctttctcaatatggcccaaca
tactttggactggaacatgcccaggttctttctcgccacttgcttcattcaagtttacca
ggtctcactaggatggaacagatgtcactgatggcattggcagatacaattgccactact
agtactgatataggagaaagcagagatagaaatcagggtggagaaacacttgatgaatgt
ggtttaaaattccttttagctgttcggcttcacacgtttctgaccacctcgcttcctcct
gtgcatagagcccagctgcttcgccaaggtttatctactagtcacttcgcctgggcattt
cattcagtagcagaagaagaactactgaacatgcttcctgcaatgcagaaaggagatcca
acttggtcagaactcagagccatgggtgtaggatggtgggttcgaaatatccatacattg
cgcagatgcatagagaaggtagctaaagcagcctttcagaggaacaacgatccacttgat
gcagccattttttaccttgcgatgagaaagaaggctgtgatttggggattatacaggtcc
caaaaagaagctaagatgacacagttttttggaaacaattttactgaagatagatggcgt
aaagcagcattaaagaatgctttttctttgctgggcaaacagcgttttgaacattctgca
gcatttttcttgttggctggtcatttaaaagatgcagttgaggtctgccttgaaaagctg
aatgatattcagctggctcttgtaatatcaaggctctatgaatcagagtttgaagtatcc
agtacttacaaatctatactacagaagaggattttgggaagttcatttcacgggaaagag
agttcatccagcatacacaatgatccctttctacgaagtatggcttattggattttgcaa
gattacaggagggctcttgatactctaattaagcagcctattggagatgatggtgatgga
catacctcatcaagttgtaaccctgcagtgtttaatttctataactatctaaggacgcac
ccactcctgttgagacgccattttggctcttctgatgcaccttccacacatatatgctta
actgtagaaaatggactagcagataaaatcaatctaggggaaagaaggttgttcttcact
acagcatatgctcatttaaaaactggctgtcccatgttagctctggaagtgttatcaaag
atgccaaaagtggtcaagaactcaaagtctttttgtagaactcctagcttaatagatagt
agtaaagactactcaccatcttctccagtaagattagaagctcaagatagatcttctctt
gttgatgggtcacaaccagttctaaatggtttaggatcaccttcagatgcttcatctgat
aagcagtcaagctcagttctttcttttgactggagccagccaagtttagtatttcaagat
gaacctttggaactaaagtgggacagtgacaaagatgaggaaagtgaagattcttctctt
ataatgaaagagctgaaacccagacccaagaccagtgaaaagctagatgaaactagttcc
agctacacaggatctttcagtgcacttgatgaaactgatattttaagtccatctgaagat
gttatttcagcacatttgaagtttagagcatgtttgaaaattctcaccgtagagcttcgt
acactgtcaacgggttatgaggtagatggcgggaagctgaggtaccagctttatcattgg
cttgaaagggaagtggtagctcttcaaaaaacctgtgactacagtgctgaagtagaggag
atgaaatctgggattagtgtggtagacgaaattgcattaagtgaaaatactgaagagtca
cctgaccaacaaaaagctatgattcagagagagaattttctaacaagacagcaatggctt
ctaaaataccagtcactcctgagaatgttccttagttactgtatacttcatggatctcat
ggtggaggattggcatctgtgaggatggaattgattttacttttacaagaatctcagcag
gaacagtctatacaaattccttccagtcctctgcgagaacagaattctataccacttcta
tttgcttgtacagccagtgccaaaacagtggtggccaatccattactgcacctcagtaac
ctgacccatgatatactacatgccataatagaccttgattcaccacctcatccagatgtc
cagaataacaaaatatatgtaatgcatactttggcagcatcactctctgcttgcatctat
cagtgcctttgtggtggccacagctacagctcattacaagcaaaccagttcactggaaca
gtgtaccaaacactcttgcttacccagcgccattcattaaaagcagcaagcttagatgaa
accgtaactccaaatacaccaccagctcagtggccaggaattacagctttaatacggctt
ttgaattctgctggggaggaagcccagccatcactcacagttttactctgtgaaattcta
acatcagtctatcttagtctgttcataaatggcctagcaacacattccagtaatgagttg
tacaggattatggcccatccactcaatgacaaaatgtggtctgctgtctttggaggtgga
gctcatatttctagcagaggacagacgcaactgagaacaaaaactgtttcttcccctgta
gatgatggtgaaaaacaacagaaacgttttagactttcctcaaaattgtctccaaaagag
tgtccccagtctccgtcatcaccaacggtggaacagggatctccacattacagggaaaag
tttattcctcccgaacttagtatctgggactatttcatagcaaagccttttcttccatcc
tcacaaagtcgagtagaatatgattcagaggagagccaaggaagtgatgatgatgaggag
gaggatgaggaagatgtttttgcatcagactcacaacttcaggagcattctaattcaaat
tcatacagttggtcactgatgagattgactatgattcagatggtgcttcataatttgaag
actttctatcccttggctggacatgatctttcagaacttccagttagctccccgctgtgt
cacgcagtcctaaagacacttcagcgctgggagcaagttcttctccgacggcttgagtta
tacggtggcccccctcaaaattttatttcagttcatgcacctgaggaagcattatctgca
ggtcctgcactccttcgccacaaggttttgcttgaacctacaaacactcctttcagatct
aaaagtcatgttgcattgtctgtgaagagactttggcagtacctggttaagcaggaagta
atccaggaaacgtttatccgaaatatatttacgaagaaaagatgcctcagtgagtcatta
gaggaccacagtgaaaccatcaaaaattctatgatggaggagcccatcaacaataagata
gaaacagatctgggatatccaggaggtaaagcacgaattattcataaagagtctgacatc
attactgcttttgcagtcaataaagcaaatcggaactgcattgccatagcttccagccac
gacattcaagaactagatgtttctgggattctagctacacaaatctatacgtgggttgac
gatgaaatagaaactgaaactaaagggtctgatgactttttggttgtacatgctcgtgat
gatctgtcaactgttcagggtactacaccttatactcacagcaatcctggcacccctata
aacatgccttggcttggtagtacgcagactggtagaggtgcatctgtgatgctcaagaag
gctattaataatgtcagaagaatggcttcccacccaactctaccatattacctgacaggc
gctcaggatggtagcgtgagaatgtttgaatggggccatgcacaacaaattacatgtttc
cgctctggtggcaattcaagggtaacacggatgagatttaatcatcagggaaataagttt
gggattgttgatgctgatggatatataagtttataccagacaaactggaagtgttgtcca
catactggaatcacccccaaaccatatctgacatggcagtgtcataacaaaaccaccaat
gattttgttttcatcagttcctcttctttgatagccacagctggacagtctactgacaac
agaaatatatgtttatgggatacgttggttggtcctgcaaattgtttagtgcacgctttt
gtgtgccatgatagtggggcaactgtattagcatatgctccaaaacatcagcttttatta
tcaggcggcagaaaaggatttacctgtgtccttgatcttcgacaaaagcaacaacgacag
ctttttcagagtcatgattctccaattaaagcaattgcagtggatcctacagaagaatat
tttgttacaggatctgcagagggcaacataaaggtatggagtttatccacctttaatctt
ctgcatacatttgtcaatgagcatgctcgacagtccatcttcagaaacattgggacagga
gtcatgcaaattgaaaccggaccagcaaatcacatattctcctgtggagctgatgggaca
gtaaagatgagaatcttgcctgatagatttagcccatttaatgaagtgttaaaaaatgat
gtgaaacttatgctgtaa
DBGET
integrated database retrieval system
