Alligator mississippiensis (American alligator): 102567055
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Entry
102567055 CDS
T03087
Symbol
HARBI1
Name
(RefSeq) harbinger transposase derived 1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102567055 (HARBI1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Gene silencing
Transposable elements
102567055 (HARBI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
102567055
NCBI-ProteinID:
XP_006261446
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All DBs
Position
Un
AA seq
348 aa
AA seq
DB search
MAVPIAVLDCDLLLYGRGHRTLDRFKLEDVTDEYLMSMYGFPRQFIYYLVDLLGASLSRP
TQRSRAISPETQILAALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIH
FPEDEASMQSLKDDFYSLAGIPGVLGVVDCTHVAIKAPNAEDLSYVNRKGLHSLNCLMVC
DARGVLLSVETHCPGSLQDCTVLQQAALTSQFEAGLHKDGWLLGDSSFFLRTWLMTPLHI
PETPAEYRYNMAHSATHNIIERTFRTIRSRFRCLDGSKGTLQYSPEKSSHIILACCVLHN
ISLEHGLDVWSTPATGQMEQLEEEYEQMESMDSEAYNIRQELLLTHFS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacctatagcagttctcgactgtgacctcttgctgtatggccgtggacatagg
acattggatcgcttcaagctggaggatgtcactgatgagtatctgatgtccatgtatggc
tttcctcgacaattcatttactatctggtggatcttctgggagccagcctctctcgccct
acacagcggtccagggccatcagtccagagacacagattcttgctgcattaggtttttat
acttctggttcctttcagactaggatgggagatgccattggcatcagccaggcctccatg
agccgctgtgttgccaatgtcaccgaggcattggtggaaagagcctcacaattcattcat
tttccagaggatgaagcctcaatgcagagcctgaaggatgacttctatagcctggcaggg
atcccaggagtgctaggggtggttgactgcacccatgtggcaatcaaagcaccaaatgct
gaggacctgtcctatgtgaaccgaaagggcctgcactctttaaactgcctgatggtttgt
gatgccagaggagtacttctgagtgtagagacacactgtccgggcagcctgcaagactgc
actgtgctacagcaggcagcccttaccagccagtttgaagctgggctgcacaaagatgga
tggttgcttggtgacagctccttctttctccgaacatggttaatgacacctctgcatatc
cccgagacccctgcagaataccgttataacatggcacattctgccactcacaatataatt
gagcggacattcagaaccattagatcacggtttcgttgtctagatgggtccaaaggcacc
ctgcaatattctccagagaagtccagccacattattctggcctgctgcgtgcttcataat
atctctctggaacatgggttagatgtgtggtctaccccagcaacaggacagatggaacaa
ctagaggaggaatatgagcaaatggaatctatggactctgaagcctataatatccgccag
gagcttttacttactcattttagctaa
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