Alligator mississippiensis (American alligator): 102567106
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Entry
102567106 CDS
T03087
Symbol
NEO1
Name
(RefSeq) neogenin 1
KO
K06766
neogenin
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04350
TGF-beta signaling pathway
amj04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102567106 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102567106 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102567106 (NEO1)
Cell adhesion molecules [BR:
amj04515
]
Immunoglobulin superfamily
DCC/UNC5 family
102567106 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
DUF4998
TMEM154
TM_ErbB1
EphA2_TM
GBS104-like_Ig
Herpes_UL74
Sp38
Neur_chan_memb
FAM176
Motif
Other DBs
NCBI-GeneID:
102567106
NCBI-ProteinID:
XP_019354897
LinkDB
All DBs
Position
Un
AA seq
1434 aa
AA seq
DB search
MAAILEDGNTRASSVRTFMPFYFVVEPTDTLSVRGASVVLNCSAFCETSPKIEWKKDGTF
LNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEGYYQCVATVESLGTIVSRTAKLTIAGLP
RFISQPESTSVYRGNSAILNCEVNADLVPFVRWEQARQPLFLDDRVFKLPSGSLIISNAT
DGDEGLYRCIIESGGSPKYSDEAELKILPDPEFPSDLVFLRQPSSLIRVTGQSAVLPCAA
AGFPTPVIRWTRNEEELITEGSERFLLLAGGSLEISDITEDDAGTYACIVDNGNETAEAQ
ADITVLAPPEFLKQPANIYAHESMDIVFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKE
HNLQVLGLVKSDEGFYQCIAENDVGNVQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAP
ATTGPLPSAPRDVVATLVSTRFIKLTWRTPASDPQGDNLTYSVFYTKEGINRERVENTSR
PGEMQVTIQNLMPETVYIFRVVAQNKHGPGESSVPLKVATQPEVQLPGPAPNIRAYANSP
TSITVTWETPLSGNGEIQNYKLYYMEKGTDNEQDVDVGGHSYTINGLKKYTEYSFRVVAY
NKHGPGVSTQDVVVRTLSDVPSAPPQNLSLEVRNSKSIMVHWQPPPPGTHNGQITGYKIR
YRKVSRKSDVTESIGGTQIFQLIEGLERGTEYSFRVAALTINGTGPATDWVSAETFESDL
DETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGVGSPHAQTIKVDYKQRY
YTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRSQTDTSEVDVFVINAPYTPVPDPSP
MMPPVGVQASILSHDTIRITWADNSLPKNQKITDARYYTVRWKTNIPANTKYKTANTTTL
SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTI
IVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQ
ARNSKGMGPMSEAVQFRTPKASGTGGKGSRPVDLGPDYKPPMSGSNSPHGSPTSPLDSNM
LLVIIVSVGVITIVIVVIVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLW
IHHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSM
STLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSGSLASPTRSYLHHQVNP
WPIGTSMSHSDRANSTESVRNTPSTDTMPASSSQTCADHQDPDSATGSYLASAQEEDSSQ
NLPTAHVRPSHPLKSFAVPAVPPSSSTYDPALPSTPLLSQQASNHPVHSVKTASIGTLGR
TRPPMPVIVPSAPDVQETTRMLEDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggctgccatacttgaagacggcaacaccagggcatccagtgtgagaaccttcatgccc
ttctattttgtggtggagcccacagacacgttatctgttcggggagcttcagtcgtactg
aactgttcagctttttgtgagacttctccaaaaattgagtggaaaaaagatggaactttt
ctaaacttggtgtcagatgatcgtcgccagctgctacctgatggatctttattaataaac
agtgtagtgcattccaaacacaataagcctgatgaaggatactatcagtgtgtggcgact
gtggaaagccttgggaccattgtaagcagaacagccaagctcacaatagcaggacttccc
aggttcatcagtcagccagaatcgacatctgtctatagaggaaacagtgcaattcttaac
tgtgaagttaatgctgatctagtaccatttgtgaggtgggagcaggcccgtcagccactt
tttctggatgaccgcgtatttaaactaccgagtggatctctaataattagcaatgcaacg
gatggggatgaaggactgtatcgttgcatcattgaaagtggtgggtcccccaaatacagc
gatgaggcagagcttaaaattcttccagatccagagtttccctcagacttggtgtttctg
aggcaaccctcttcgcttatcagagttactgggcagagtgcagttttgccatgtgctgct
gcaggatttccaactccagttatcaggtggacaagaaatgaagaagagcttatcacagaa
ggctctgaaaggtttcttttgctggcgggaggtagcctagagatcagtgatatcacggaa
gatgatgctggaacatacgcctgcatcgtggacaatgggaatgagacagctgaagctcaa
gcagatattacagttttagctccacctgaatttctgaagcagcctgctaatatttacgct
catgaatccatggatattgtgtttgaatgtgaagtgactgggaaaccaactccaactgtg
aaatgggtcaagaatggcgacatggtgatccctagtgactacttcaaaattgttaaggaa
cacaacctgcaggtcttgggtctggtgaaatcagatgaaggattctatcagtgcattgca
gaaaatgatgttggaaacgtgcaggctggagcccagctaataatacttgaacacgatgtt
gccatcccaacattacctcccacttcactgaccagtgccactactgaccatctagcacca
gctacaactggaccgttgccttcggcccctcgggatgtcgtggccaccctcgtctctact
cgcttcatcaaactgacatggcggacaccagcatcagatcctcagggagacaaccttacc
tattctgtattctacaccaaggaaggtataaacagggaacgtgttgaaaatacaagtcgc
cctggggagatgcaagtgacaatccaaaacctgatgccagaaacagtctacatttttaga
gttgtggctcaaaataaacatggccctggagagagctcagtaccattgaaagtggcaact
cagcctgaagttcaacttcctggtccagcacccaacattcgagcatatgccaactcaccc
acttcaatcactgtcacctgggaaacgccattgtctggcaatggagaaattcagaactac
aagctttattacatggaaaaggggacagataatgagcaggatgttgatgtgggaggtcac
tcctacaccattaatggcttgaagaaatacacggagtatagcttccgagtggtggcctac
aataaacatggccctggagtgtctacccaagatgttgttgtgcgaacgctgtcagatgtt
cccagtgctccaccccagaatctgtccctggaagttcgaaattccaagagcatcatggta
cattggcagccccctcctcctgggacccacaacggtcaaatcactggctacaaaattcgc
taccgtaaagtttctcgtaagagtgatgtaacagagagcattggagggacacagattttt
cagctaattgaaggtcttgagcgaggtacagaatacagcttccgggtggctgccttaaca
atcaatggtacaggaccagctactgactgggtatcagcggaaacttttgagagtgacttg
gatgaaactcgcgtccctgaagtacccagttcgttacatgtccgtccactggttaccagt
atagtagtaagctggactcctcctgaaaatcagaatattgtggtgagaggatacgctata
gggtatggtgttggcagtcctcatgcacagaccatcaaagtggactacaaacagagatat
tacaccattgagaacttagatccaagctcccactatgtcataactctgaaagctttcaac
aatgttggcgaaggcatcccactctatgagagtgcagtgaccaggtcacagacagacact
tctgaagttgatgtatttgttattaatgctccatacactccagtgccagatccctccccc
atgatgccgccagtgggcgttcaggcttccattctgagtcatgacaccataaggatcact
tgggcagacaactctctgccgaagaatcagaagatcacagatgctcgctactacacagtg
cgctggaaaaccaacattcctgcaaacaccaagtacaagactgcaaacacgaccactttg
agctatttagtgactgggttaaaacctaacaccttgtatgaattctctgtgatggtgact
aaaggtcgaagatcaagcacttggagtatgacagcacatggaaccacctttgaattagtt
cctacctctcctccaaaggatgtgactgtagtaagcaaagaaggaaaacctcggaccata
attgtgaactggcagcctccatctgaagctaatggcaaaattacaggatacatcatttac
tacagcacagatgtgaatgctgagatacatgattgggtcattgaacctgttgtaggaaac
agattgactcaccagatccaagaattaacccttgatacaccatattatttcaaaatccag
gcacgcaactccaaaggcatgggacctatgtcagaggcagtccagttcagaacacccaaa
gcttcgggaactggaggtaaaggaagtcggccagtggatctaggaccggactacaaacca
ccaatgagtggcagtaacagtcctcacggaagccccacatcgcccttggatagcaacatg
cttctagtgatcatagtatctgttggagtgatcaccattgtgatagtggtgattgttgcc
gtcttctgcactcgtcgtaccacttctcaccagaaaaagaaacgagctgcctgcaaatca
gtgaatgggtctcataaatacaaaggaaactccaaggatgtcaaacccccagatctctgg
atccatcatgagagactggagctaaaacctattgataaatctccagaccccaacccaatc
atgacagacaccccaattcctcgtaactctcaagacatcacaccagttgacaattccatg
gatagcaatatccatcaaaggcggaactcttaccggggacatgagtcagaggacagcatg
tccacactggcaggaagaagggggatgaggccaaaaatgatgatgccgtttgattctcag
ccacctcagcctgtgattagtgctcatcccatccattcacttgataaccctcaccatcat
ttccactccggcagcctcgcttctccaactcgcagctatcttcatcatcaggtcaaccca
tggccgattggcacgtccatgtcccattcagacagggccaattctacagaatctgttcga
aacacacctagcacagacacaatgccagcttcctcatctcagacctgtgctgaccatcaa
gatccagacagtgccacaggatcatatctggccagtgcacaagaggaggattcaagtcaa
aacctccctactgcccatgtccgtccctctcaccctctgaagagctttgcagtgccagca
gttccacccagcagttccacatatgaccctgccttgccaagcacaccattactgtcccag
caagcttccaaccatccagttcactcggtgaagactgcatcgattgggactttaggaaga
actcgacctccaatgccagtgatagtccccagtgcccctgatgtgcaggagaccactcga
atgcttgaggattcggaaagtaactatgaaccggatgagctgaccaaagagatggcccac
ctggaaggactgatgaaggaccttaatgccatcactaccgcatga
DBGET
integrated database retrieval system
