Alligator mississippiensis (American alligator): 102567214
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Entry
102567214 CDS
T03087
Symbol
GRIA1
Name
(RefSeq) glutamate ionotropic receptor AMPA type subunit 1
KO
K05197
glutamate receptor 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04080
Neuroactive ligand-receptor interaction
amj04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102567214 (GRIA1)
04082 Neuroactive ligand signaling
102567214 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102567214 (GRIA1)
Ion channels [BR:
amj04040
]
Ligand-gated channels
Glutamate (ionotropic)
102567214 (GRIA1)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
DUF2061
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
102567214
NCBI-ProteinID:
XP_006264330
LinkDB
All DBs
Position
Un
AA seq
902 aa
AA seq
DB search
MQHIFAFFCTGFLGTVLGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYTFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQ
FVLQLRPELQEALISVIEHYSWQKFVYIYDADRGLSVLQRVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQELEKKKERLVVVDCESERLNAILGKIIKLEKNGNGYHYILANLGFRDIDL
IKFKESGANLTGFQLVNYTDTIPARIMQQWKSNDAREHPRVDWKKPKYTSALTYDGVRVM
AEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVHFEGLTGNVQFNEKGR
RTNYTLHVMEMKHDGIRKIGYWNEDEKFVPAATDAQGGNESMSLQNKTYIVTTILEDPYV
MLKKNANQLEGNDRYEGYCVELAAEIAKHVGYNYTLEIVRDGKYGARDPDSKTWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEEGRDQPVADQTNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRPATAGASGENGRVVSHDFPKSMQTIPCMSHSTGMPLGAT
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatttttgctttcttctgcaccggtttcctagggacggtgttaggggccaat
ttccccaacaacatccagatagggggattatttcctaatcagcagtcccaggagcatgcg
gcttttcggttcgcactgtctcagctcacagaacccccgaaactgcttccccagatcgac
attgtgaacatcagcgacagctttgagatgacatacaccttctgttcacagttttccaag
ggcgtttatgccatctttgggttttacgagaggaggacggtcaacatgctcacgtccttc
tgcggggccctccatgtctgcttcatcacgcccagcttccctgtcgacacatccaaccag
tttgttctccagctacgcccggagctccaggaggcccttatcagtgtcatcgagcactac
agctggcagaaattcgtctacatttacgatgccgaccggggcttgtcagtcctccagaga
gtgctggatacggcggcggagaagaactggcaggtgacagccgtcaacatcctgacgacg
acagaggaaggatacaggatgctcttccaggagctggagaagaagaaggaaaggctggtg
gtggtggactgcgaatccgagaggctgaacgccatactgggcaagatcatcaagcttgaa
aaaaatgggaatggctaccactacatcctggcgaacttgggattcagggacattgacctg
ataaaattcaaagagagtggagccaatttgactggctttcagttggtgaattatacagac
accatcccagcccggatcatgcagcagtggaagagcaatgatgccagggagcaccctcga
gttgactggaagaagccaaagtacacatcggctcttacttacgatggagttcgagtgatg
gctgaggccttccagagcctacggaggcagcggattgacatctcccgtcgaggaaacgct
ggggattgccttgcaaatccggccgttccttggggtcaaggcattgacattcagagagct
ctgcagcaggtgcactttgaaggattaactggaaatgttcagtttaacgagaagggtcgt
cggaccaactacaccctccacgtgatggaaatgaaacacgatggcatccggaagattggc
tactggaacgaagatgaaaaatttgtcccagcagccacagatgcacaaggtggcaacgaa
tccatgagtctccagaacaagacatacatagttaccacaattctagaagacccgtacgtg
atgctcaagaagaacgccaaccagcttgaaggcaatgacaggtatgaaggctactgcgtg
gagcttgctgctgagatcgctaagcatgttggctacaattacacgttggagatagtgaga
gatgggaagtatggagcccgggaccctgactctaaaacatggaatggcatggtgggagaa
ctggtgtatggaagagctgatgttgctgttgcaccactgaccatcacccttgttcgagaa
gaagttatcgacttttccaaaccgtttatgagcctaggcatctccatcatgataaagaaa
cctcagaaatccaagcccggggtgttttcctttctggatcccttggcttatgagatctgg
atgtgcatcgtctttgcctacatcggagtcagcgttgtcctcttcctggtcagccgcttc
agcccgtacgagtggcacaccgaggaatttgaagaagggcgcgaccagccagttgctgat
cagactaacgaatttgggatatttaacagtctctggttctccttgggagcctttatgcag
caaggatgtgatatttcaccaagatctctctctggccgcattgtgggtggcgtctggtgg
ttcttcaccctcatcatcatctcctcctacacggctaacctagctgccttcctgacggtc
gaaaggatggtgtcaccaatcgagagtgcagaggacctggccaagcagacagagatcgcc
tacgggaccctggaagctgggtcaactaaagaattttttaggcgctctaaaatagcagtg
tttgagaagatgtggacatacatgaaatcggccgagccctccgtttttgtgaggaccacg
gaagagggcatgatccgggtgagaaagtcgaaagggaagtatgcctaccttctggagtcg
acgatgaacgagtacatcgagcagcggaagccgtgcgacacaatgaaggtgggaggtaac
ttggattccaaaggctatggcattgcaacgccaaaggggtctgcactgagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggagtgtggaagcaaagactccggaagtaaggacaagacgagtgct
ttgagtctcagcaacgtggcgggcgttttctatatcctcatcggtgggctcggactggcc
atgctggttgccttaatcgagttttgttacaagtccaggagtgaatccaaacggatgaag
ggtttttgtttgatcccgcagcaatcaattaatgaagccataaggacatcgacacttccc
agaccagccacagcaggagccagcggagagaacggacgggtggtcagccacgatttcccc
aaatccatgcagacaattccgtgcatgagtcacagcaccgggatgcccctgggagccaca
ggattataa
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