Alligator mississippiensis (American alligator): 102567231
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Entry
102567231 CDS
T03087
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein B
KO
K16482
centriolar protein POC1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102567231 (POC1B)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102567231 (POC1B)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102567231 (POC1B)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102567231 (POC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
eIF2A
Ge1_WD40
RMC1_N
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IP5PC_F
Cytochrom_D1
Beta-prop_RIG_1st
Beta-prop_WDR75_2nd
THSD1_N
Motif
Other DBs
NCBI-GeneID:
102567231
NCBI-ProteinID:
XP_006268688
LinkDB
All DBs
Position
Un
AA seq
440 aa
AA seq
DB search
MIWNLKPQSRAFRFVGHVEAVNSVQFSPDGQLLASASQDRTVRLWVPCIHGESSVLKAHT
AAVRSVNFSHDGRFLVTASNDKSIKIWSVHRQRLLFSLSQHTHWVRCAKFSPDGRLIASC
SEDKTVRIWDTTNKVCVDSFTDYEGFANFVDFNPSGTCVVSAGANHTVKLWDIRMNKLLQ
HYKVHRAEVNCVSFHPSGNYIITAASDGTLKILDLLEGRLIYTLHGHKGPVLSVAFSKGG
EKFASGGADSQVLLWNTNFDAFNRKEVLKHHLRRTHTDDPPHLLDIYPRSPHRHNVKSQS
IEINPNFDVTDLQTLDPPVIDIGSSSSFSSPTRTAGSSNSISTFKDDVNSEDSQYPPASF
SPTSSRRKLEDENESAVCSTDKQTGISPAVGNALEHIVEQLDVLTLTISILEQRLTLTED
KLKECLENQQKILLQSRQGE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgatatggaatttgaagccacagtccagagcttttagatttgtgggtcatgtggaagca
gtgaatagcgtacagttttcaccagatggacaactactggcctcagcttctcaagaccgt
acagttagactgtgggttccgtgtattcatggagaatcttcagtcctaaaagcccatact
gcagctgtccgtagtgtgaacttctcacatgatggccgctttctagttacagcatccaac
gacaagtcaataaaaatatggagtgttcaccgtcagcggcttttgttttctttgtcccag
catacgcactgggttcgctgtgccaaattttcaccagatggaagattaatagcatcttgc
agtgaagataaaactgttagaatctgggatacaacaaataaagtgtgtgtcgatagtttc
acagactatgaaggatttgccaattttgtggatttcaatccaagtggtacgtgtgtagtt
tctgcgggtgctaatcatacggtgaaactctgggatattcgaatgaacaagttactgcag
cattacaaagttcacagagcagaagtgaattgtgtatcatttcatccttctggtaactat
atcatcactgctgcttctgatggcacccttaagattctggaccttttggagggaagactc
atatatacactccatggacacaagggacctgtcctttccgtggccttttcaaaaggtgga
gaaaaatttgcatcaggcggagctgattctcaggtcttgctgtggaacacaaattttgat
gcattcaatcgcaaggaagttcttaaacaccaccttagaagaacacatactgatgatcca
ccccaccttcttgatatttatccaagatcacctcatcgccacaatgtgaaatctcagtca
attgagatcaatcctaactttgatgtgactgatttacaaacgcttgatccacctgtcata
gatatcggttcttcctcatctttcagttctccgacaaggacagctggatcttcaaatagc
atttccacgttcaaggatgatgtgaacagtgaagattcccagtatcctccagcctcattc
tctccaactagctcaagaaggaagctggaggatgagaatgaatcagctgtgtgtagtaca
gacaagcaaactggcatctccccagctgtgggtaatgctttggagcatatagtggagcaa
ctggatgttttgactctgactatttcaatcctggaacagcgactaactttgactgaagat
aaattgaaagagtgcctagaaaatcaacaaaaaatattactacaaagtaggcaaggagaa
taa
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