Alligator mississippiensis (American alligator): 102567275
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Entry
102567275 CDS
T03087
Symbol
ATG13
Name
(RefSeq) autophagy related 13
KO
K08331
autophagy-related protein 13
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04136
Autophagy - other
amj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102567275 (ATG13)
04136 Autophagy - other
102567275 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102567275 (ATG13)
03029 Mitochondrial biogenesis [BR:
amj03029
]
102567275 (ATG13)
Membrane trafficking [BR:
amj04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102567275 (ATG13)
Atg1 complex
102567275 (ATG13)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102567275 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
PCM1_C
Motif
Other DBs
NCBI-GeneID:
102567275
NCBI-ProteinID:
XP_019332553
LinkDB
All DBs
Position
Un
AA seq
519 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTTAEDNAA
VYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADMGYPVVFAGGLNAAHPHQ
LIVPGKEGGVPLVPSQSPHATQADQERMAMCTPLDGAHYSAATPSSSEDTETVSNSSEAK
SGSPHDILETIFVRKVGAFVNKPINQVTMANLDIPFAMFAPKNIELEDNDPMVNPPDSPE
TESPLLGSLHSEGSSGNSTGNTHDDFVMVDFKPAFSKDDILPMDLGTFYREFQNPPQLSS
LSIDIGAQSMAEDLDSLPEKLAVHEKNVKEFDAFVETLQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagctcccaagacaggaaggacctggacaagttcatcaaatttttt
gctttgaagaccgtacaagtgattgtccaggcccgacttggagagaaaatctgtactcga
tcatcctcttcaccaacaggctctgactggttcaacttggcaatcaaagatataccagaa
gttactcatgaagcaaagaaagccttggcaggacagctacctgctgttggacggtcaatg
tgtgtggagatctctcttaaaacctcagagggagattccatggagttggaaatctggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcttacactgtgtacaacaga
ctgtctctacttctgaagtctttgcttgctataacccgggtaactccagcctacagactc
tccaggaaacagggccatgaatatgtaatactgtacaggatatacttcggggaagtgcag
ctgagcggcttgggagaaggtttccaaacagtccgtgttgggacagtgggtactccagtg
ggcaccatcactttgtcttgtgcctacagaatcaacctggccttcatgtcaacacggcag
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctac
cccagctcttcacccatgcacccctgcaattacagaacaactgctgaggacaatgcagca
gtatatccatcagtggaagactctcaggaagtgtgcaccacttctttttccacttcccct
ccatcccagctttccagctctcgtctttcctatcagcctgctgccctgggagttggatca
gctgacatggggtatccagtagtctttgctggtggcttgaatgctgcacatcctcatcag
ttgattgttccagggaaggagggtggagtgcccctggttcctagccagtcaccacatgct
actcaagctgaccaagagaggatggcaatgtgcacccctttggatggagcccactactca
gcagctacaccttctagtagcgaggacacagagacagtatcaaacagcagtgaagcgaag
agtggctccccacatgatatcttggagaccatctttgtccggaaggtgggagcctttgtc
aacaaacctattaatcaggtgaccatggccaacttagacattccttttgccatgtttgct
cccaagaacattgagctggaggataacgaccccatggtgaatcctcctgactccccagaa
actgagtctcctctactgggcagcttacattcagagggctccagtggtaacagcaccggg
aacacacatgatgattttgtcatggttgattttaaaccagcattttcaaaagatgacatt
ctcccaatggacctggggacattctaccgtgagtttcagaacccccctcaactcagcagc
ctctccattgacattggggctcagtccatggcagaggatctggactcattaccagagaag
ctggcagtccatgagaaaaacgtcaaagagtttgatgcctttgtagagaccttgcagtga
DBGET
integrated database retrieval system
