Alligator mississippiensis (American alligator): 102567397
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Entry
102567397 CDS
T03087
Symbol
USP38
Name
(RefSeq) ubiquitin specific peptidase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102567397 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102567397 (USP38)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102567397 (USP38)
Peptidases and inhibitors [BR:
amj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102567397 (USP38)
Ubiquitin system [BR:
amj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102567397 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102567397
NCBI-ProteinID:
XP_006278071
LinkDB
All DBs
Position
Un
AA seq
1035 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRVIVRRVVESAETPLSQAQCRAMFALSTRLILQGPDPFQRQV
GRQVLEAYARYHRADFEAFFNRALVLGLLRGGYGERRRGDPAVLDYVRAGLRLLISCPSV
LELFEALRAEALRLLGERPGPPLCARLCQLLADFPQCLPRGRKPALAFCQQLVRTMAHFQ
SPPGGREPDLRLYVSQVAQVSSLLRALWKAEPDALLPSLQELFALISSTDASFEPSVALA
SLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLA
AVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLVVPHVVNL
VNSFKRDGLPSSTAFLMQLAELIHCMMYHYSGFPELYEPILESIKDLPKPSEDKIKLTLS
QSAWTSQSNSLPSCLSRLPGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRHVLSLNL
NGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHE
EERTLKALSSAKLPESMNEESLAQEIAHKAQLFTEAPCTGGEERTLIEKMFGGKLKTSIC
CLNCKSTSQKEEAFTDLSLAFCPPTPLENVSLKTIAHCEGKDACMLQASTVAAEEPALDN
SSAGGDGSDAVMSEGTPGDVSSEPDSENTIDSALNKVKDHTDASQKGVNESTPSVTDLLN
YFLAPEILNGENKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRFSYDPKCHIRRKILDN
VSLPLVLELPVKRTASPLSTVSGGWPEDVEFSDIGENLAKKLKPSGADEVNCPQLVPYVL
SSVVVHSGVSSESGHYYSYARNVTGSGLCHQSKTLSLISPHNNLLAGENPSAIIENDPDT
NEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQCSTGRFNANSANGLCVN
GDPPLQKELMDAITKDNKLYLQEQELSARTQALQAASASCSFRPNGFDDNDPPGSCGPTG
GGGGGGFSTIGRLVF
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggaggggctggtgagctcgtcgcacccgctgccgctgaagcgggtg
atcgtgcggcgcgtggtggaatcggccgagacgccgttgagccaggcgcagtgccgcgcc
atgttcgcgctcagcacgcgcctcatcctgcagggccccgaccccttccagcgccaggtg
ggccgccaggtgctggaggcctacgcgcgctaccaccgcgccgacttcgaggccttcttc
aaccgcgcgctggtgctgggcctgctgcggggcggctacggcgagcggcgccgcggcgac
ccggccgtgttggactatgtgcgcgccggcctgcgcctgcttatcagctgcccctcggtg
ctggagctcttcgaggccctgcgggcggaggcgctgcggctgctgggtgaacggccgggc
ccaccactctgtgcccgcctctgccagctgctggccgacttcccgcagtgcctgccccgc
ggccgcaagccagccctcgccttctgccagcagctggtgcgcaccatggcgcacttccag
agcccgccgggcggccgtgagcctgacctgcgcctctacgtctcgcaagtggcccaggtc
agcagcctcctgcgtgccctctggaaggctgagcctgacgccctgctgccctccctgcag
gagctcttcgcccttatctcctccacggatgcttcatttgaaccttctgttgcactggca
agccttgtgcagcatatcccattacagatgattacagtactcatcaggagccttactaca
gatccgaatgtaaaagatgcaagtatgactcaagctttgtgcagaatgattgactggctg
tcctggcctcttgctcagcatgtagagacttgggtgatagcattgctgaaaggactggct
gcagtccagaagtttaccattctcattgatgttactctgcttaagattgaactggttttc
aatcgactttggtttcctcttgtgaggcctggtgctctggctgtcctttcccacatgctg
cttagttttcagcattctccagaggcttttcacttggttgttcctcacgtagtcaattta
gttaactcctttaagagagatggtctgccttccagtacagctttcttgatgcaactggct
gagctgatacactgtatgatgtatcattattcaggatttccagaactctacgaacctatt
ctggagtctataaaggatctgcccaagcccagtgaagacaagattaagttgactcttagt
caaagtgcctggacttctcaatccaattccttgccatcttgtttatctagacttcctgga
aaatctgaaactgggaaaactggtcttattaatcttgggaacacatgctatatgaacagt
gttattcaggcactttttatggccacagatttcagaagacatgtattatctttaaatcta
aatggctgcaattccctaatgaaaaagctacaacatctttttgcatttttggctcatact
cagagggaggcatatgctcctcggattttctttgaggcctccaggccaccctggtttact
cctagatcccagcaggactgctctgaatatctcaggtttctgctagacagactgcatgaa
gaagagagaaccttgaaagctttgtcttcagcaaagcttcctgaaagtatgaatgaagag
tccctggcacaagaaattgcccacaaagcacagctgtttactgaagcaccatgtacagga
ggtgaagagagaactttaattgagaaaatgtttggagggaaactgaagaccagtatatgc
tgtctgaactgcaaaagcacttctcagaaagaggaagccttcacggatctctcactggca
ttttgtcctcctactcctttggaaaatgttagcttgaaaaccatagcacattgtgaaggg
aaagatgcctgtatgttgcaagctagtactgtggctgctgaagagccagcacttgataat
tcttcagcaggaggtgatggctctgatgcagtcatgagtgaaggaactccaggagatgtt
tcttctgagccagactctgagaatactatagactctgctctgaacaaagttaaggatcat
acagatgcatctcagaaaggagtaaatgaaagtactccttcagttactgacttactgaat
tattttctggcacctgagatccttaatggggaaaacaagtattattgtgaaaaatgtgcc
tctctacagaatgcagagaaaactatgcaaatcattgaggaacctgaatacctcattctt
actctcctaagattttcatacgatccaaagtgtcacataagacgtaaaatcttggacaat
gtgtctctgccacttgttttggagttacctgtcaaaagaactgcatcccctttatctaca
gtgtcagggggttggcctgaggatgttgaattctctgacattggagaaaaccttgctaaa
aaactgaagccttcaggtgctgatgaagtgaactgcccacaactggtgccctatgtactg
agttctgttgtagtgcactctggtgtatcctctgaaagtggacattattattcttatgcc
agaaatgtgacgggttcaggactgtgccatcaatcaaaaactctctctctcatttctcct
cacaataacttattggcaggggagaatcccagtgcaattatagaaaatgacccagacact
aacgagatgtcaaaagaatggtttctttttaatgacagcagagtgacatttacttcattt
cagtcagtccagaaaattaccagtagatttccaaaggacactgcctatgtgctgttgtac
aaaaaacagtgtagcactggtcgcttcaatgccaattcagcaaatggactgtgcgtgaac
ggagaccctcctcttcagaaagaacttatggatgctattacaaaagacaataaattatat
ttacaggaacaagaacttagtgctcgaacacaggcacttcaagctgcctcggcctcatgc
tcttttcgacccaatggatttgatgataatgatcccccaggaagttgtggaccaacaggt
ggagggggtgggggaggatttagtacaattggtagattagttttttga
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integrated database retrieval system
