Alligator mississippiensis (American alligator): 102567656
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Entry
102567656 CDS
T03087
Symbol
PAAF1
Name
(RefSeq) proteasomal ATPase associated factor 1
KO
K11887
proteasomal ATPase-associated factor 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
amj03051
]
102567656 (PAAF1)
Proteasome [BR:
amj03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
102567656 (PAAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
EIF3I
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
102567656
NCBI-ProteinID:
XP_006258011
UniProt:
A0A151PJR8
LinkDB
All DBs
Position
Un
AA seq
392 aa
AA seq
DB search
MAATVRVQSDWHQVLRRNEGEAWLSCRSPGKSTLYGSLTCQGVGSDGIPEISASEGFVVS
EITKKSILISCPHENASTKFLAPYTSFCRIHQKSVTCIDISSGGGLGVSTSTDGTMKIWQ
AANGEIRRQLEGHVYDVNCCRFFPSGLVVLSGGMDAQLKIWSVEDASCAVTFKGHRGGIL
DTAIVDRGRNVLSSSRDGTARLWDCGKSACLGVIADCGSPVNGIAVGVADNSLNLGTPEI
APSEREIGTEDKILLLAREDKKLQGVGLQSRQPVFLFVGSDAFNCCTFLSSVYLLAGTQD
GNIYQLDMRNTTAPVQVIHRSGAPVLSLLPYRDGFIASQGDGTCFILQQDLDYTIDLTEA
DCDPVYKVAACEKEIYTCCRDGIVRRYQLSNC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaccgtgcgggtgcagagcgactggcaccaggtgctgaggaggaacgagggc
gaggcctggctgagctgcaggagcccggggaaatctactttgtatggtagcctgacatgt
cagggagtagggtcagatgggattccagagatctcagcctctgagggttttgttgtaagc
gaaataaccaagaagagtatactcatttcctgccctcatgaaaatgcctccacaaagttt
ttggcaccatacacttctttttgcagaattcatcagaaaagtgtcacctgcattgatatc
tccagtggcggagggcttggcgtgtctaccagcactgatgggaccatgaaaatctggcag
gctgctaatggagagataagaagacagttggaaggccatgtgtatgatgtgaattgttgc
aggttcttcccatcgggccttgtggttctgagcgggggaatggatgcccagctaaagatc
tggtcggtggaagatgccagctgcgcagtaacctttaaaggtcacagaggaggaatcttg
gacacagccatcgtggatcgggggagaaatgtcctttccagctctagagatggcactgct
cgcctctgggattgtgggaagtctgcttgcctaggagtgattgctgactgtggttctcct
gtcaatggcattgctgtgggtgttgctgacaattctctcaacttgggcacgccagagata
gcccccagtgagcgagaaattggcacagaagacaaaatcctgctgttggctcgggaagac
aagaagctccaaggtgtgggattacagagcaggcagccggtgtttctctttgttggctct
gatgccttcaactgctgcacattcctctcaagcgtttatctgctggcagggactcaggat
ggaaacatatatcaactggatatgagaaacacaacggctccagttcaggtcattcacaga
tcaggagcaccggtgctttccctgctgccttacagagatggattcattgccagccaaggt
gacggaacatgtttcattcttcagcaggatctggattacaccatcgatctcacggaagct
gactgcgaccctgtgtacaaggttgctgcatgtgaaaaagagatctacacgtgctgtcga
gatgggatagtgaggagataccagctctccaactgctga
DBGET
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