Alligator mississippiensis (American alligator): 102567744
Help
Entry
102567744 CDS
T03087
Symbol
STAB1
Name
(RefSeq) stabilin 1
KO
K19020
stabilin-1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102567744 (STAB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
amj00536
]
102567744 (STAB1)
Glycosaminoglycan binding proteins [BR:
amj00536
]
Hyaluronan
Cell surface receptors
102567744 (STAB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
FXa_inhibition
EGF
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
102567744
NCBI-ProteinID:
XP_019345541
LinkDB
All DBs
Position
Un
AA seq
2628 aa
AA seq
DB search
MASPSSPSPSPSRKGPCPYYMKMHLPGLLFFLLTASFISTTEGQTQKLRSMQCNVKMMFT
LNTPCTSCAASPKSTCPKGWIKVTQGLGERNCKFFYLRYTVKLGEDTLSLPGCSHMCKKE
IEDKKCCPGFWGTECYECPGGSENPCSGHGTCLNGITQNGTCICEERYSGSACQNCRDET
LFGPGCQSVCDCQHGVCNHGITGNGSCTCYGGYTGPKCDQELPLCRELTCEPKTQCVVKA
GVARCDCIPGYSKVGSVCQVQDPCASSPCSSLADCKVLGPLKYECTCKDGYQGDGEICQP
INPCIQNNGGCPEKSTLCIYKGPGRSSCMCKPGMSSLTPSAGCSFISECQRFYCDMTSQC
KISPNGSPSCVCKEGEIGDGRSCYKSLMSEISQLNTRGRFLRKLNSANKMFASGCSLILT
KYGPFTVFVPTLHPFNDKFDFNDTIAENLCKMHIIPGQHLLEDMIKTKTMWTLSGHQLTF
NDPRYSKSFRYQDVPGELYTFLQWNLPAANGIMHIVNTLRKKPTFKNLGNPQKTIGEILA
SMEIFSRFETILENCGLPSILDGPGPFTVFVPSNEGVDKLRDGRLIYLFTEGINKLQELV
KHHIYTVAAVTVEKLLMMPHIITMANQIVTINISTDGRILLTDSGIPLNMKNIVASNGII
HTLDGIFIPSSIIPILPQRCNEVQHTIVTGSCVDCKALNTSLCPPYSTEVEPEPLPKECV
YVHDPLGLNVMKKGCARYCNQTILKPGCCKGFFGPDCTQCPGGFSNPCYGRGNCSDGTQG
NGNCHCFEGFKGIACHICSNPNKHGENCDEDCGCVHGICDNRPGSGGVCQSQSCKDGYTG
KFCDKTSKNCGSNGLSQYCHQNAVCSLNDTARCICMDGYEGNGFSCQPIDLCKKSGQGGC
SENALCTSTGPGTATCRCNKGWTGDGKACVAINNCELETRGGCHVSADCIYVGPGQSNCI
CKRGYFGDGYNCDPIDPCLLDNGGCSNLAICKPLGGGERSCSCSQGYMGDGIICYGDVLK
ELARNSHFAGFYEWIQQKSAFSIPAGTNVTVLVPLEAAIKNMSKAEKDFWLTSYMLPVLV
RSHFLQGSFTSEQLKKYDGQELPTLNPQMRWEIRSNNDITIQNARTIVADIPSIDGIIFI
INKVLLPPLGSIPPSPPRLQKQLDMIPSFSIFKELLVQYQLIGQIESAEKYTIFVPGNSS
IEEYCHAANITQLDSNTVQYHVILGEKLLSTDLKSGVHKSTMLGISYWLMFYNNSTQTSV
NNILLNGKIFETMNGMLFGVAHVLQIQKNHCTANTTTVQKSKCGKCDKGIKCPPGSILAE
PPGSGKIPHCELWSGDKQTLGCYFTCIKVSLRSVCCPGYYGHMCEMCPGKPGNWCSGNGV
CLDGIAGSGECQCNEGFHGTACEMCEVGRYGPKCKSGNHHFCQIWNCHCVTEKKNYAFIL
VHRYGISTMESKTVNFSLVGIGIDLCNNTCHQMANCINDSVESLPICSCSAGYTGNGTHC
TEINPCTFDNGGCSIHATCTKVSPGEKVCSCKEGYAGDGTLCLEVDLCLEDNGGCHAKAE
CSKAGPNKVSCNCLPGYSGDGQKQCDAINLCKENNGGCNRFGICEYTGPGTRRCSCSPSN
FGDGFTCRGNLYQELMRSEAASIFFKKIQAFNIKEINGAGVFTIFVPNAESIQNSTTFAE
WENHTLIKDLVRYHIVGCHKLLSSDLEMQESIVALSGHKIHISVKENSLYLNDDAKVITS
DLVGLNGVIHIIDKILIPGELQSLSIPSQLSQQNVTDVAEAYGYKIYSKLLREAGLLTMV
NNPIHRPFTMLWPTDAVFNSFPEKRQKWLYHKDHRDELAAYLKVHMIRDMKIVAGNLPHI
NSVRTMHGSTISFSCSRSNVGELLVDNGNAKIVQRHMEFNGGIAYGIDQLLEPPNLGSRC
DEFLSIELKGSVETCGLCGFEPSCPPGSVQRGESKMCLYYYENAFYRSSSYPYHRFMFPS
SGYFSLFHDSNRWPQLRRSLKRGCRRNCFSTSWVPQCCANHYGRDCRVCPGGLEAPCSNR
GICDDRIGGSGQCNCTTAFIGTACELCAPGRYGPECKECNCTKNGMCNEGLHGDGFCFCS
EGWTGEHCETKLALIPVCSPACHPQAVCKLNNVCECSLHYEGDGRTCTVIDRCQDDNGGC
SEHANCTQIGVDVSCTCLPDYQGDGYVCSPIDKCADGRNGDCSEHALCISTGPNAYHCEC
KPGYVGNGIQCLEEAVPPVDRCLEENGSCHRDAICTDLHFHDKTAGVFHLQSPRGKYKFT
YREARAACAAEGASLATLQELSAAQQMSFHLCLVGWLDNGTAGYPTAYPNPNCGSSHVGI
VNYGFQSDLNKGWDAFCYRAKDVMCSCQDGFIGDGYFCSGNLLAVLAEHENFSTFYSMLL
DFANITQDGLDFLNFLSNDTTYKTVFIPLNSGFGDNMTLTWEELKLHVSMSNIFLLSFNL
TDSTVIPSCSGYNLSIAESENRTQLTGSRVANNTLIVEWDILAYNGIIHAIERPLQITRP
TLPLHVDQITSAAKSSNPVTVGVTSVVVIVMLFLAIAGVAYYYLKMKQEGFQFHYFKADM
EEELSEQEGSPSLVSIPNPVYGAHNCIYEPFDDSFNGEDFSDNHRILE
NT seq
7887 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccttcttcaccatcaccatccccttcaagaaaaggaccctgtccttattac
atgaaaatgcatcttcctggtttattgtttttccttttaacagcaagtttcatttccaca
actgaagggcagactcagaagttaagatccatgcaatgcaatgtgaagatgatgtttact
ttgaatactccatgcacttcctgtgctgcatctccaaaatcgacatgccccaaaggctgg
ataaaggtcacccagggactaggagagagaaactgcaaatttttctatttaagatacaca
gtaaagctgggagaagacaccctttctctacctgggtgcagtcatatgtgtaagaaggaa
atcgaggacaaaaaatgttgcccagggttctggggtactgagtgctatgaatgccccggt
gggtctgaaaatccttgcagtggccatgggacctgtttgaatggtataacacagaatgga
acctgcatctgtgaggaaagatatagtggctctgcctgtcaaaattgtcgggatgagact
ctgtttggccctggctgtcaatcagtgtgtgactgtcagcatggtgtctgcaaccatggt
atcactggtaatggaagctgtacctgctatggaggatacactggtcccaagtgtgatcaa
gaactacccctttgcagagaattgacgtgtgaacccaaaacccagtgtgtggtaaaggct
ggagtagcaagatgtgactgcattccagggtatagtaaggttgggagcgtgtgccaagtt
caggatccttgtgcttcatcaccatgttcctcattagctgactgtaaggttcttggaccc
ttaaagtatgagtgcacctgcaaagatggttatcaaggagatggggaaatatgtcaacca
ataaatccctgcattcagaataacggaggctgccctgaaaaatctacactctgtatttat
aaaggtccagggaggtcatcttgcatgtgtaaacctggaatgagcagcctaactccttca
gcaggctgctcatttattagtgagtgtcagcggttttactgtgacatgacttcacaatgc
aaaatcagtccaaatgggagtcctagctgtgtctgcaaggaaggggagattggagatggg
agaagctgctacaaaagtctcatgagtgaaatctctcagctgaatactcgaggaaggttt
ctcaggaagttaaacagtgcaaacaaaatgtttgcttcaggttgttcattgatattgaca
aaatatggacctttcacagtctttgtgccaactcttcatccatttaatgataaatttgac
ttcaatgataccattgcagaaaatttatgcaaaatgcacataattcctggtcagcatttg
ttggaagacatgatcaaaaccaaaacaatgtggacattgtctgggcatcagctgacattt
aatgacccgcgctacagcaaaagcttcaggtatcaagatgttccaggtgaattgtatact
tttctccaatggaatttaccagctgccaatggcattatgcatatagttaacactttaagg
aaaaagcctacatttaaaaaccttgggaacccacagaaaaccattggtgagattcttgct
tcaatggagatcttcagtcgatttgaaactatcctagagaactgtggcctgccttcaata
ctggatggaccaggaccctttactgtgtttgtaccaagcaatgaaggggtggataagtta
agagatgggcggcttatttatctctttacagagggtataaacaagcttcaggagcttgtg
aaacaccacatctacactgtggcagcggtgactgtggagaagctgctgatgatgccacat
attataaccatggcaaaccagatagtgaccatcaatattagcacagatggaagaattctg
ttgactgattctggaattcccttaaatatgaagaacattgtggcatctaatggaatcatt
catactttggatggcatcttcattccttcttcaataatccccattctgccacagagatgc
aatgaagtacagcataccattgtaacaggcagttgtgttgattgcaaagccttgaacacc
agcctttgcccaccttacagcacagaagtggaaccagagcctctccccaaagaatgtgta
tatgtccatgacccattggggttgaatgttatgaaaaaggggtgtgccagatactgcaat
caaaccattttgaaacctgggtgttgtaaaggattttttggtcctgactgcacgcaatgt
ccgggtggattttccaatccctgctatggcagaggcaattgcagtgacgggactcaagga
aatggcaattgtcattgctttgagggtttcaaaggaatagcctgccacatatgttcaaac
ccaaacaagcatggggagaactgcgatgaagattgtggctgcgtacatggaatttgtgat
aacaggccaggcagcgggggagtatgccagtcacagtcgtgtaaagatggctatacaggg
aagttctgtgataagacatctaagaattgtggttcaaatggactgtctcagtactgtcac
cagaatgcagtctgtagtcttaacgacacagcaagatgcatctgcatggatggctatgaa
ggaaatggattttcctgccagcccattgatctgtgcaaaaaatcaggacaaggaggctgt
tcagaaaatgccctgtgtaccagtacaggccctggtactgctacctgccgatgtaacaag
ggctggactggggatggaaaagcctgtgtggctataaacaactgtgagctggaaacaaga
gggggctgtcatgtcagcgcagactgcatttatgttgggcctggacagagcaactgtatc
tgcaagaggggctattttggtgatgggtataactgtgaccctattgacccttgtctgctg
gataatggtggctgcagtaatttggctatatgtaaacctcttggaggaggagagaggtcc
tgttcttgctctcagggatatatgggagatgggattatatgttatggagatgtactaaaa
gagctggccaggaattcccactttgcaggcttctatgaatggattcagcagaagtctgcc
ttcagtataccagcaggaactaatgtcactgttttggtacctttggaagcagccataaaa
aacatgagcaaggctgaaaaagatttctggctgacatcctatatgctgccggttttagtc
aggtctcactttctccaaggttcctttacctcagagcagttgaaaaaatatgatggtcag
gaattacccacccttaatccacaaatgagatgggagataaggagcaataatgacataacc
attcagaatgcaagaactatagtagctgacatacctagcattgatggcattattttcatc
ataaataaggttttgttacctcctttaggaagtatcccaccaagccccccaaggctccag
aaacaacttgacatgattccttcatttagtatattcaaggagttgttagtgcaataccag
ttgattgggcaaattgagtctgcagaaaaatatacaatttttgtcccaggaaatagttca
attgaggaatattgccatgctgccaacatcacacagttggatagcaacactgtgcagtat
catgtaatacttggagagaagctcttgtctacagacttgaaaagtggagtccataagagt
acgatgttgggaatatcctactggctaatgttttataacaacagcacccagacatctgta
aataatatcctcctgaatggtaaaatctttgaaacaatgaatggcatgttgtttggggtt
gctcatgttctccagatacagaaaaatcattgcactgccaataccacaactgtacaaaag
tcaaagtgtggcaagtgtgacaagggaatcaagtgccctcctggatctatcctggctgaa
cctccaggaagtgggaagatccctcactgtgaactttggtctggagataagcaaacactt
ggttgttatttcacctgtatcaaagtttccttaaggtctgtctgctgtccaggttactat
ggacacatgtgtgagatgtgcccaggaaagccgggaaattggtgttcggggaatggggtg
tgcctggatggtattgctggcagtggagaatgtcagtgtaatgagggcttccatggcaca
gcctgtgaaatgtgtgaagttggcagatatggaccaaaatgtaaatcaggtaatcaccat
ttctgtcaaatttggaattgccactgtgtcacagaaaagaaaaattatgcattcatccta
gttcacagatatggtatatctactatggagagtaaaactgttaatttttctcttgtaggc
attggaattgatttatgtaataacacttgccatcaaatggccaattgcattaatgattct
gtagaatccctgcctatttgctcctgctctgctggatacactggaaatggaacccattgt
acagaaataaatccatgtacttttgataatggtggttgctcaatacacgcaacatgtact
aaagtctcacctggagaaaaggtctgttcttgtaaggaaggctacgctggagatgggaca
ctctgtctggaagttgacctctgtctggaggacaatggaggatgccatgctaaggcagag
tgttcaaaagcaggcccaaataaggtttcctgtaactgtcttcctggctacagtggagat
ggtcaaaaacaatgtgatgccatcaatctttgcaaggagaataatggaggctgtaatcga
tttggtatctgcgagtacacaggacctgggactcgcagatgttcctgtagtccgagcaat
tttggagatggatttacctgcagaggcaatctatatcaggagctcatgaggagtgaagca
gcttctatattcttcaaaaagatccaggcctttaacatcaaggaaataaatggagccgga
gttttcaccatctttgttccaaatgcagagtcaatacagaacagtacaacgtttgctgaa
tgggagaatcacaccctcatcaaagatttggtgcgctaccacattgtgggttgtcataaa
ctgttgtccagtgacttggagatgcaagagtctattgtggctttatcaggacacaaaata
catatttcagtgaaagagaatagtttgtatctaaatgatgatgctaaggtcataaccagt
gatcttgttggactaaatggagtgatccatatcattgacaagattttaatcccaggtgaa
cttcagagtcttagcattccctcccagctatcacagcagaatgtcactgatgtggcagaa
gcatatggatacaaaatctacagcaaacttctgagggaagcagggctactcactatggtt
aacaaccccatccacagacctttcaccatgctgtggcctactgatgctgtatttaacagc
tttcctgagaagaggcaaaaatggttgtatcataaagaccacagagatgagctggcagca
tatctcaaagtgcacatgattagagacatgaagattgtagctggtaacctgccacacatt
aattctgtaaggaccatgcatggatccactatctcattcagttgcagcagaagtaatgtt
ggggagctgttggtggataatggcaatgccaagattgtccagaggcatatggagtttaat
ggtggcattgcctatggcattgatcagttgttggagcctccaaacctggggtctcgctgt
gatgagttcctctccattgagcttaagggatctgttgagacctgtgggctttgtggtttt
gagccttcttgtcctcctggatcagtccaacggggggaaagcaagatgtgcctttactac
tatgaaaatgcattttacaggtcctcctcttatccataccaccgctttatgtttccaagc
tctggatacttttcactgtttcacgatagcaatagatggcctcaacttaggaggtccttg
aaaagagggtgcaggaggaactgtttttccaccagttgggttccacagtgctgtgcaaac
cactacggaagagactgtcgggtgtgccctggaggactagaggctccatgcagcaaccgt
ggtatttgtgatgatagaattggtgggtcaggacaatgcaactgcaccacagctttcatt
gggacagcgtgtgagctttgtgcaccaggcagatatgggccagagtgcaaagagtgtaac
tgcacaaagaatggaatgtgtaacgaagggttacacggtgatggattctgcttctgtagt
gagggctggacaggagaacactgtgaaaccaaactagctctgatacctgtgtgctcccca
gcttgccatccccaggctgtctgcaaactcaacaatgtctgtgaatgcagcctacattat
gaaggggatggaagaacttgcacagtcattgaccggtgccaggatgacaatggaggatgc
agtgagcatgctaattgcactcaaattggtgttgatgtctcctgcacttgcttacctgac
taccaaggagatggctatgtctgcagccctatagacaaatgtgcagatggcaggaatggc
gactgcagtgagcatgccttgtgcatcagcacagggccaaatgcttaccactgtgaatgc
aaaccaggttatgttgggaatggaatccagtgtctggaggaagctgtcccacctgtagac
cgctgcttagaggagaatggaagctgccatcgtgatgccatttgcactgacctacacttt
catgataaaacagctggtgtgttccatctccagtcacctagaggaaagtataaattcacc
tacagggaggctcgggctgcctgtgcagcagaaggtgcttccttggcaactcttcaggag
ctctcagcagcacagcagatgagtttccacctctgcttggtgggttggcttgataatggg
acagcagggtatccaactgcatacccaaaccctaactgtggttccagtcatgttgggatt
gtgaactatggtttccaaagtgatttgaataaaggttgggatgctttctgctacagagct
aaagatgtgatgtgtagctgtcaagatgggttcattggggatggttacttctgcagtgga
aatcttttggctgtactggcagaacatgaaaacttttcaaccttctactctatgttactg
gattttgccaatatcactcaagatgggcttgactttctcaactttctttccaatgacacc
acatataaaacagtcttcatacccttgaattctggatttggagacaatatgacattaaca
tgggaagagctgaagctgcatgtctctatgagcaatatctttctcttgagcttcaatctc
acagacagtacagttataccttcctgctcaggatacaacctttccattgcagaatctgag
aatagaacacagctcactggttccagagtggctaataataccttgatagtagagtgggac
attctggcctacaatggaataattcatgccattgagagacctctccagataactcgtcct
actcttcctttacatgtggatcagataaccagcgctgcaaagtcatctaaccctgtgact
gttggagtcacctcagttgttgttatagtcatgctatttttagctattgctggagtggcc
tattactacctcaagatgaaacaagaaggattccaattccattatttcaaggctgacatg
gaggaagaactatctgagcaagaagggagcccgtccttggtgtccatcccaaatcctgtc
tatggagcccacaactgcatttatgaaccttttgatgactctttcaatggtgaagatttc
tcagacaaccatagaattctggaatga
DBGET
integrated database retrieval system
