Alligator mississippiensis (American alligator): 102567965
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Entry
102567965 CDS
T03087
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102567965 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102567965 (CNOT3)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102567965 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102567965 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
102567965
NCBI-ProteinID:
XP_006277686
LinkDB
All DBs
Position
Un
AA seq
728 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSIMVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKSVHNNHHPQSPAVTPSYQLGSSSSTSSSLGNGPGSNSNGAVSSGSSAGNKASPA
TGHTPSTPTPYAQAVAPPPASTSASQPRPPSAQQNASKQNGATSYSSVVADSSSDSALSS
SSSSQTLPSQLTTHNPPSSTAKEPGGALPPHSSSSSSSSNSSNAATTTSSLLVPMTANPP
SSPTPSFSEAKPGQQLLNGPPPFSSTPEIKAPEPLSSLKSMAERAAIGSSIEDPVPSLHL
AERDILITSTTSQPASSQPPIQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHM
PHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQY
LAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYR
YLEDRDLQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaggaaactacaaggtgaaattgatcgctgcctgaagaaggtctctgaa
ggagtagagcagtttgaagacatctggcagaagctccacaatgcagccaatgcaaaccaa
aaggagaagtacgaagcagacttgaagaaggagatcaagaagctccagagactgagggac
cagatcaagacctgggtagcttcaaatgagatcaaagacaagaggcagctgatagacaac
cggaagctcattgagacgcaaatggagcggttcaaggtggtggagcgggagacaaagacc
aaagcctactcaaaggaggggctgggcctggcgcagaaggtggacccagcacagaaggag
aaggaggaggttggccagtggcttacgaacaccatcgacaccttgaacatgcaggtggat
cagtttgagagtgaggtggagtcgctgtcggtccagacccggaagaagaagggggacaag
gataagcaggaccggattgaaggcctgaagcgtcacattgagaagcatcggtaccacatc
cgcatgctggagaccatcctgcgcatgctggacaatgactccatcatggtggactctatc
cggaagatcaaggacgatgtggagtactatgtggactcctcgcaggaccctgacttcgag
gagaatgagttcctctatgatgaccttgacctagaagacattccacaggctctggtagcc
acctccccgcccagccacagccacatggaggatgagatcttcaaccagtctagcagcact
cctacctccaccacctccagctcgccaattccgcccagccctgccaactgcacgacggag
aactcggaagatgacaagaagagggggcgatcaacagacagcgaagttagtcagtcacct
gcaaagaatggttcaaagagcgttcacaacaaccaccacccgcagtcgccagctgtcaca
cctagctatcagctagggagcagttcaagcacctcgtcctcactgggcaatggccctggc
tccaacagcaatggggctgtgtccagtgggagcagtgctggcaacaaggccagtccggcc
acagggcacacacccagcacccccacgccctacgcccaggccgtggcacccccacctgcc
agcaccagcgcctcacagccccggccccccagtgcccagcagaatgctagcaaacagaac
ggtgccacaagttatagctctgtggtagccgacagttcatcagactcagctttgagcagc
agcagcagcagccagacgcttcccagccagctgacgacccacaatccccccagcagcact
gcgaaagagcctggtggagccctaccaccacacagcagcagcagcagcagcagcagcaac
tccagcaatgctgccactaccacctccagccttttggtccccatgacggcgaatcccccc
agctccccgacccccagcttttcggaggccaagccaggccaacagcttctcaatgggcca
ccccctttcagctccacccctgagatcaaggcacctgagcccctcagcagtctgaaatca
atggcagagagagcagccattggctccagcatagaggaccctgtgccatcacttcacctt
gctgaaagggacatactgattactagcacaacctcgcagccagcctctagtcagcccccg
atccagctctcggaggtgaacatcccactctccctgggggtctgtcccctggggccagtg
ccactcaccaaagagcagctctaccagcaggccatggaggaagcagcctggcaccacatg
cctcacccctcggactcggagaggatccggcagtatctgccccggaacccttgcccgact
cccccttaccaccaccagatgcctccgcctcactcagacaccgtggagttctaccagcgc
ctctcaacagagacgctcttcttcatcttctactatctggagggtaccaaggcgcagtac
ctggcagccaaagccctgaagaagcagtcatggcggttccacaccaaatacatgatgtgg
tttcagcggcacgaggagcccaagaccatcacagatgaatttgagcagggcacgtacatc
tactttgactatgagaaatggggccagaggaagaaggaaggcttcacttttgagtatcgc
tacctggaggatcgggacctgcagtga
DBGET
integrated database retrieval system
