KEGG   Alligator mississippiensis (American alligator): 102567992
Entry
102567992         CDS       T03087                                 
Symbol
LARP1
Name
(RefSeq) La ribonucleoprotein domain family member 1
  KO
K18757  la-related protein 1
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amj03019]
    102567992 (LARP1)
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102567992 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 102567992
NCBI-ProteinID: XP_014465381
LinkDB
Position
Un
AA seq 1016 aa
MAAWHPGRFCLLVELHSGVWKRCEFGRGSVTVDRCQTVKLSSPVGNACPAAAAPPGEEPA
AATRRDFIEAPPPKVNPWTKHAPAVVNGQSPPEHSTPAKVVRAANPRQRKGSKVGDFGDA
TNWPTPGEIANKSVQPHKPQPLRKLPIKKDMKEQEKGDGSDGKENLKARSDESGEEKNGD
DDIQKAGQKKKGNKHRWVPLQIDMKSDVSRDKTASRNNRQNEQHRHPSNNRGELKGWHPD
NKHERNWTDHDETSSVKSEGGAVRGAFRGRGRGRGRGRGRGRGGTRSHFDYQYGYRKFDG
SDGSRAQKYTSNITYYFDNISSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKM
DSDGFLPITLIASFHRVQALTTDISLIIKALKDSKVVEIVDQKIRRKEQPEKWPLPGPPM
ADYTQTDFSQLINCPEFVPRQSFQKETESAPGSPRAASPVPTKTEEVSNLKTMPKGLSAS
LPDLDSETWIEVKKRPRPSPARPKKAEESKTPQQQKQKDQDEPEELDFLFDEEMEQMDGR
KNTFTDWSDEDSDYEIDDRDVNKILIVTQTPPYLRRHPGGDRTGNHTSRAKMSSELAKVI
NDGLYYYEQDLWTEQFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGP
PRFQQVPTDALANKLFGVPEPSTIARSLPTTVPESPNYRNARTPRTPRTPQLKDPTQTPR
FYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPSEGTPAV
GSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFW
SFFLRDHFNKKMYEEFKQLAVEDGKEGYRYGLECLFRYYSYGLEKKFRPDIFKDFQEETI
KDYEAGQLYGLEKFWAFLKYSKAKNLDIDSKLQEYLSKFKRLEDFRVDPPMGEEGGQKRY
PSTAGGDGRKRYPSQSSSKPVSQPPASSGQPAREDAKPPSQPAPATAAVDPHALGK
NT seq 3051 nt   +upstreamnt  +downstreamnt
atggcggcatggcacccaggtcgtttttgccttctcgttgaactgcattcgggagtatgg
aaacggtgtgaatttggcaggggctcggtgaccgtcgacaggtgccagacagtcaaatta
tccagcccggttggaaatgcctgtccagcagcagccgccccgccgggcgaggagccggcc
gccgccacccgccgcgacttcatcgaggcgccgccgcccaaggtgaacccctggaccaag
cacgccccggccgtcgtcaacgggcagtccccgccagagcactcgacgcctgccaaagtg
gtgagggctgcgaacccgagacagcggaagggaagcaaggtcggtgacttcggggatgcc
acaaactggccgacccctggagaaatagccaacaagagtgtccagccgcacaagccacag
cccctgcggaagctgccgatcaagaaggacatgaaggagcaggagaagggggacggaagc
gacggcaaggagaacctgaaggcccgatcggacgagtccggggaggagaaaaacggtgac
gacgacatccagaaggcaggccagaagaagaagggcaacaagcacaggtgggtcccgctg
caaatcgacatgaagtcagacgtgtcgagggataagaccgcctcccgcaacaaccggcag
aacgagcagcaccgacacccctccaacaaccgcggcgagctgaaaggctggcaccccgac
aacaaacacgagcggaactggaccgaccacgacgagacctccagcgtgaagagcgagggc
ggcgctgtgcgaggagctttccggggaagaggccgtggccggggccgcggcaggggccgg
ggcagaggaggtactcgctcgcacttcgactaccaatacggctaccggaaattcgacggc
tcggacggctcgcgcgcccagaagtacaccagtaacatcacctactacttcgacaacatc
agcagcaccgagctctacagcgtggaccaggagctgctcaaggactacatcaagcgccag
atcgaatactacttcagtgtggacaacctggagcgggacttcttcctgcggcgcaagatg
gactcggacggcttcctccccatcaccctcattgccagcttccaccgggtgcaggccctg
accacggacatcagcctcatcattaaggcactgaaggacagcaaggtggtggagattgtg
gaccagaagattaggagaaaggagcagcctgagaaatggcccttgcctggccctcccatg
gcagactacacgcagaccgacttctcccagctcatcaactgccccgagttcgtgccccga
cagagcttccagaaggagacagagtccgcgccgggctccccccgtgctgctagccccgtg
cctaccaagacggaggaggtcagcaacctgaagacgatgcccaagggcctgtccgccagc
ctgcccgacctggactcggagacgtggatcgaagtgaagaagaggccccggccctcccca
gccaggcccaagaaagcagaggagtcgaaaacgccgcagcagcagaagcagaaggaccag
gacgagccggaggagctggacttcctgttcgacgaggagatggagcagatggacgggcgc
aagaacaccttcaccgactggtcggacgaggactcagactacgagatcgacgaccgcgat
gtcaacaagatcctcatcgtcacgcagacacccccctacctgcgccgccaccccgggggt
gaccggaccggcaaccacacctcccgggccaaaatgagctcggagctggccaaggtgatc
aacgacgggctgtactactatgagcaggacctgtggaccgagcagttcgagcccgagtac
tcgcagatcaagcaagaagtggagaacttcaagaaggtgaatatgatcagcagggagcag
tttgacaccctcaccccagagcccccggtcgatccgaaccaggaagtccctcctggaccc
ccccggttccagcaagtccccactgatgcgctggccaacaagctcttcggcgtccccgag
ccatccaccatcgcccggtctctgccaacgactgtgccagaatcacccaactaccgcaac
gccaggacgccccgcaccccccgcacgccacagctcaaagacccgactcagacgccgcgg
ttttacccggtcgtgaaagagggcaggacgatagatgccaagactccccgcaagcggaag
acgagacacagctccaaccctcccatggagtgccacgtcggctgggtgatggactcccgg
gagcaccggccacgaactgcctccatcagttccagcccctcggaagggaccccggccgtg
gggagctacgggtgcacgccgcagtcgctgcccaagttccagcatccctcgcacgagctg
ctcaaggagaacggcttcacgcaacatgtgtaccacaagtaccgtcggcgctgccttaat
gagcggaagcgactgggcatcggtcagtcccaggagatgaacacgctcttccggttctgg
tcgttcttcctccgcgaccacttcaacaagaagatgtacgaggagttcaagcagctggct
gtggaggatgggaaggagggatacaggtatggtctggagtgccttttcagatactacagc
tacgggctggagaagaagttccgcccagacatcttcaaggatttccaagaagaaaccatc
aaagattatgaagccgggcaactctacgggcttgaaaagttctgggccttcttgaaatat
tccaaagccaaaaatctggacatcgacagcaaactgcaagaatacctcagcaagttcaag
cgcctcgaggacttccgcgtggacccgcccatgggggaggaaggcgggcagaagagatac
ccgtcgacggcaggaggagacgggaggaagcgctatccatcccagtcttctagcaagccg
gtcagccagccccctgcctcgtccggccagcctgccagagaggatgccaaacccccgagc
cagcctgccccggccacggcggctgtggaccctcacgcgctggggaagtag

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