Alligator mississippiensis (American alligator): 102568034
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Entry
102568034 CDS
T03087
Name
(RefSeq) tripartite motif-containing protein 55
KO
K10654
tripartite motif-containing protein 55
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102568034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102568034
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102568034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-B_box
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
Sina_RING
Motif
Other DBs
NCBI-GeneID:
102568034
NCBI-ProteinID:
XP_019350733
LinkDB
All DBs
Position
Un
AA seq
729 aa
AA seq
DB search
MRERERASAIKYLESYQGAEPGPWRPQANSCIQHVTRDILLPSTISWCFPSALQSVTEEE
PASSAPLFCCSSAAGSGWGGVGWTGFLMPLPMEYKSYPRDHHTMDSLERQLICPICLEVF
TKPVVILPCQHNLCRKCANDIFQSRGTTLGSAGRFRCPSCRHEVVLDRHGVYGLQRNLLV
ENIIDIYKQESARCPNSSRPLLKTEQPRCEEHEEERINIYCVTCRVPTCSLCKVFGEHKD
CEVAPLSDIYMQQKTELTDGIGALVAANDGIQAFIGRLQGTCKNIEDNCKAQKQALCEKF
DRMYAILEERRKIMLQRITYEQEEKTQHVKSLARLYGDRVESASKLVDTALQSMEEPQMA
VFVQNARVLIQKISEVTQSCQLEEMESGYDNMEHYAVDFNAEERVLYHLDFIRVEEEPGE
EGEEDAEGTAAESARAEGTASQGEGQDNVIPNGKEEEEEGKASTMKEAECDAAGEADGMA
APLGLAQFGSVAQAGKEAAEGDPGPGQQKDAAALDGELNAAVPDAPGFLGHLAPPSHAKG
SALETPSLGNAETEEAAGCSRAEAITSDSSAGSKSDDLGKSCVAGAAPGERPGAEKETAS
APCQGFKCRSITKACRILATAATERQKNTGKQYLALKVSPARYEITLFCLSILRFPWYKS
LPCTFQSTISPLAKPLGSEREHETISQQASHKHMPSLAFVVVSQTSMCLGRSCDHVFVDE
IFAFNLLPK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagagagagagagagggcctctgctatcaaatatctggagtcttaccaaggggctgaa
ccaggcccctggagaccacaagccaacagctgcatccagcatgtgactcgtgacatcctg
cttccctccaccatctcctggtgctttccctcggccttgcagtcggtgaccgaggaagaa
ccagccagcagtgctcccttgttctgttgctcaagtgctgccgggtcggggtggggtggg
gtggggtggaccggcttccttatgcctctcccaatggaatacaagtcctacccgagagac
caccacaccatggacagcctggagaggcagctcatctgtcccatttgcttggaggtgttc
actaagccggtggtgatcctaccctgccagcacaacctgtgccggaagtgtgccaacgac
atctttcagtctcgtgggacaaccctggggtccgcaggcaggtttcgctgcccgtcctgt
cgccatgaggtggtcctggaccgacacggtgtctacggcctgcagaggaacctgctcgtt
gagaatatcattgacatttacaaacaggagtcggccagatgccccaacagctccaggccc
ctgctaaaaacggagcagccacggtgcgaggagcatgaggaggagcggatcaacatctac
tgtgtgacgtgccgggttcccacctgctccctctgcaaggtctttggggagcacaaggac
tgcgaggttgcacccctgtccgacatctacatgcagcagaagaccgagctgacggatggg
atcggagcccttgttgccgccaacgatgggatccaagccttcatcggtcgcttgcaaggc
acctgcaagaacatagaggacaactgcaaagcccagaagcaggctctgtgcgagaagttc
gaccgcatgtatgccatcctggaggagcgcaggaagatcatgctgcagcgcatcacctat
gagcaggaagaaaagacccagcacgtgaagtcacttgccaggctgtatggggaccgtgtc
gagtctgcctccaagctggtggacaccgcgctgcagtccatggaagagccacagatggct
gtctttgtgcagaatgcccgtgtcctcatccagaagatttcagaggtgacccagagctgt
cagctggaggagatggagtccggctacgacaacatggagcactacgcagtggacttcaat
gcagaggagcgggtgctctaccatttggacttcatcagagtggaagaggagcctggagaa
gagggagaggaagatgctgaagggacagcagcagagtctgcgagggccgaagggacagcg
tcacagggcgagggccaagataatgtcatcccgaatggcaaggaagaggaggaggaaggg
aaagcctcgacgatgaaggaggctgagtgtgatgctgcgggggaagctgatggcatggcc
gcccctttgggtttagctcagtttggatcagttgcccaggctggcaaggaggcagcagag
ggagaccctgggcctggccagcagaaagatgcggctgccctggatggagagctgaatgct
gctgtcccagatgcgccaggattcctgggccatcttgctccccccagccatgcaaaggga
tctgccctcgaaactccgtccctggggaacgctgagacggaggaagctgctggctgcagc
cgtgctgaggcaatcacttcagacagctcagcagggagcaagagcgatgatctaggcaag
agctgtgttgctggagctgccccaggagaaaggcctggagcagagaaggaaacagcatct
gctccctgccagggcttcaaatgcagaagcatcacgaaagcctgccggatcctggccaca
gcagccacagaaaggcagaagaatacggggaagcagtacttagcactgaaggtttctcct
gccaggtatgaaataaccctgttttgcctatccatcctgcggttcccatggtacaaaagc
ttaccgtgcacttttcagagcactattagccctctcgcaaagccgctgggctctgaacgt
gagcatgagaccatctcacagcaggcaagtcacaaacacatgccgtctctggcctttgtt
gtggtcagtcagacctctatgtgcctagggaggtcctgcgaccatgtgtttgtggacgaa
atctttgcattcaacctgctaccaaaatag
DBGET
integrated database retrieval system
