Alligator mississippiensis (American alligator): 102568267
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Entry
102568267 CDS
T03087
Symbol
VPS35
Name
(RefSeq) VPS35, retromer complex component
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102568267 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102568267 (VPS35)
Membrane trafficking [BR:
amj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
102568267 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
102568267
NCBI-ProteinID:
XP_006272331
LinkDB
All DBs
Position
Un
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcagtctcctcaagatgagcaggaaaaactcctggatgaagccatc
caggctgtgaaggtgcagtctttccagatgaagcgatgtttggacaagaacaaactcatg
gatgctctgaaacatgcctccaatatgcttggggagctgcggacttctatgttgtctcca
aagagctattatgagctttatatggctatttctgatgaactgcactacctggaagtatac
ctgacggatgagtttgccaaggggaggaaggtggccgatctttatgaactagtccagtat
gctggtaatattatcccaagactctatcttctgataacagtaggtgttgtttatgtcaag
tcctttcctcagtccaggaaagatattctgaaagatctggtcgaaatgtgccgtggtgta
caacatcctttaagaggcctgtttcttcgaaactatcttcttcagtgtaccaggaatatc
ctgccagatgaaggcgagcagacagatgaggaaaccactggagacatcagtgattcaatg
gattttgtgctgctgaactttgctgaaatgaacaaactctgggtgcgaatgcaacaccaa
ggacacagtcgagatagggagaagagagagcgggaaaggcaagaacttagaatcctagtg
ggaacaaatctggttcgccttagtcagctggaaggtgttaatgtggaacgatataaacaa
attgttttgccagggatattggagcaagtggtaaactgcagggatgctctagctcaggag
tatctcatggagtgcattatacaggttttcccggatgaatttcatctccagaccctgaac
cctttcctccgagcctgtgctgagttgcaccaaaatgtgaatgtgaaaaacataatcatt
gctttaattgacagactagctttatttgcacaccgtgaagatggtccagggatcccagca
gatattaagctttttgacatcttttcacagcaggtggctactgttatacagtctagacag
gatatgccttcagaggatgtagtgtcgttacaagtatcacttattaacttggctatgaaa
tgctatccggatcgtgttgactacgttgacaaagtgttggagacaactgtggaaatcttt
aacaaacttaatctagaacatattgcaacaagcagtgctgtttcaaaggagctaactaga
cttttgaagatcccagttgatacctataataatatcctcacagtgctgaaattaaagcat
ttccatccactctttgaatactttgactatgagtccagaaagagcatgagttgttacgtg
cttagcaatgtactggattataacactgaaattgtctctcaagagcaggttgatgcgatc
atgaatctggtatcgacgttgatccaggaccaaccagatcagcctgctgaagaccctgat
cccgaggactttgcagatgagcagagccttgtggggagatttatccaccttctgcgttca
gatgacccagatcagcagtatttgatcttgaacacagccaggaaacactttggtgcaggt
gggaaccagcgtattcgttttacactaccacctctggtctttgctgcataccagcttgca
tttcgctacaaggagaattccaaagtggatgacaaatgggaaaaaaaatgccagaagatc
ttctcatttgctcatcagaccatcagtgctttgatcaaagcagaattggcagagttgcct
ctccggctatttctacaaggagccctggctgctggagaaattggttttgaaaaccatgaa
acagtggcctatgaatttatgtctcaggcattctcactgtatgaagatgaaatcagtgat
tcaaaagcacagctggctgcaatcaccttgataattggaacatttgagaggatgaaatgc
ttcagtgaggagaaccatgagcctctgaggactcagtgtgcactggcagcttcaaagctg
cttaagaaaccagaccagtgccgggctgttagcacttgtgcacatctgttttggtctggt
cgcaacactgacaagaatggagaggagcttcatggaggaaagagagtaatggagtgcttg
aaaaaggctctgaaaatagcaaatcaatgcatggatccttcactgcaagttcagcttttt
atagaaattctgaacagatacatctatttttatgaaaaggaaaatgaagcggtgacaatt
caagttttgaatcagctcatacaaaagatacgagaagacctgccaaatcttgaatctact
gaagaaacagaacagattaacaaacactttcacaacacactggagcacttgcgtttgagg
agggaatcgccagaatcagagggtccaatttatgaaggtcttgtcctttaa
DBGET
integrated database retrieval system
