Alligator mississippiensis (American alligator): 102568281
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Entry
102568281 CDS
T03087
Symbol
CTCFL
Name
(RefSeq) CCCTC-binding factor like
KO
K23195
transcriptional repressor CTCF
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102568281 (CTCFL)
03036 Chromosome and associated proteins [BR:
amj03036
]
102568281 (CTCFL)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102568281 (CTCFL)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102568281 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_6
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
Zn_SUZ12
zf-C2H2_15
Zn_ribbon_8
zf-AtTam37
Motif
Other DBs
NCBI-GeneID:
102568281
NCBI-ProteinID:
XP_006276652
UniProt:
A0A151NZI3
LinkDB
All DBs
Position
Un
AA seq
551 aa
AA seq
DB search
MQDEAPVVVVGEGVGAQQDVPPGVAISLQDGIYTFHDMELMQISVLQDAAPGKSKESKST
EKFADVLLIKIDRSKEVLAVEGKVHQAPTAEEVRGSELPAIEGKKIQSCKPDGGRSASRH
DYKEEDATPLEEADIKYTETFRAQTNALQQKEAEKETFSCVLCTFTSLRMSSLNRHMKIH
SDEKPHLCHLCLRAFRTVTLLRNHMNTHTGTRPYKCSDCDMAFVTSGELARHRRYKHTLE
KPFKCTLCKYCSVEASKLKRHIRSHTGERPYHCSLCSYASKDTYKLKRHMITHSGEKPYQ
CYVCQARFTQSGTMKIHVLQKHSENVPRHQCPHCETVIARKSDLRVHLRNLHSHLAVALK
CSYCEAVFHERYALIQHKKTHRNEKKFKCDQCSYACKQERHLIVHKRIHTGEKPFICLCC
SKCFRQKQLLTVHFRKYHDSDFKPAVFECPKCGKSYSRWSNMHKHAETCGFTRTNAIRSS
KGSKGKKKRCRSLEHAKQEAVDQGSFQDVSIMNMEDCGTEIVPVTYGIEMTTPREQKIEM
TCDMLFDTMDK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgaggcgcccgtggtcgtcgtgggagagggggtcggcgcgcagcaggacgta
cccccgggggtggccatcagcctccaggacggcatttacacctttcatgacatggagctg
atgcagatcagtgtcttgcaagacgcagcgcctgggaagagcaaagaaagcaaatccacg
gagaagttcgcagacgtgctactcattaagattgatagaagtaaagaggtgcttgcagtt
gaagggaaggttcaccaggcacccacagctgaggaggtgagaggaagcgaacttcctgct
atcgagggaaaaaagatccagagctgtaaacccgacggtggtagatcagcatcacgccat
gactataaagaggaagatgcgactccattagaagaagcagatataaagtatacagagact
ttcagagctcagacaaatgcacttcagcagaaggaagcagaaaaggagactttcagttgt
gtcctttgcacgttcacctctctccgaatgtcgagccttaaccgccacatgaaaatccat
tctgatgaaaaaccccacctgtgccatctctgcctaagggctttccgtacagttactctc
ctgcgtaaccacatgaacacacatacagggaccaggccatataaatgcagtgactgtgac
atggcatttgtgaccagcggtgagcttgcacgacacaggcgttataagcatactctagaa
aagccctttaagtgcacactgtgtaaatactgtagtgtagaagcgagcaaattgaagcgg
cacatccgctcacacacaggagagcgtccttaccactgctctctctgtagttatgctagt
aaggatacctataagctgaaaagacacatgataactcattcaggtgaaaaaccctatcag
tgttatgtttgtcaggcaagattcactcaaagcggcaccatgaaaatccacgtattgcag
aagcatagtgaaaacgtgccaagacatcagtgtccgcattgtgagacagttattgcaagg
aaaagtgacttacgtgtccacttgcgaaacctgcattcccacctggctgtggccttgaag
tgcagttactgtgaagcagtcttccacgagcgctacgctctcattcagcacaagaaaact
cacagaaatgagaagaaattcaaatgtgatcagtgcagctatgcatgcaagcaggaacga
catttgatcgtgcataagcgcatccacactggcgagaagcccttcatttgtctgtgttgc
agtaaatgtttccgacagaagcagcttctgactgttcatttcaggaaataccatgattcc
gattttaaaccagcagtttttgagtgtcctaagtgtggcaagagctactcacgctggagt
aacatgcataagcatgctgaaacctgtggatttacgagaacaaacgctattagatccagc
aaaggaagcaagggtaaaaagaagagatgtaggagcctagaacatgctaagcaagaagct
gttgatcaaggctcattccaagatgtttccattatgaacatggaggattgtggcactgag
attgttcctgtcacatatggcatagaaatgactaccccaagggagcagaaaatagaaatg
acatgtgacatgctcttcgacacgatggacaaataa
DBGET
integrated database retrieval system
