Alligator mississippiensis (American alligator): 102568295
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Entry
102568295 CDS
T03087
Symbol
LAMC3
Name
(RefSeq) laminin subunit gamma 3
KO
K06247
laminin, gamma 3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04510
Focal adhesion
amj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102568295 (LAMC3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102568295 (LAMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
102568295
NCBI-ProteinID:
XP_019331197
LinkDB
All DBs
Position
Un
AA seq
1573 aa
AA seq
DB search
MPRAPCLCLLAAVLSLGLRPATGGMDSCYDAQGRARRCMPVFENAAFGREVQVTNTCGSP
PEDYCLQMDDGRSTQLCRRCDMGDPLHHHNATYLTDFHSQEESTWWQSQSMAFGVQHPNS
VNITLRLGKSYEITYVRLKFHTSRPESFAIYKRSRAGGPWVPYQYYSASCRKTYGKRERQ
YLRPGEDEHVAFCTEEFSDISPLSGGNVAFSTLEGRPSAYSFDQSPVLQDWVTVTDLLIS
LNRLNTFGDDIFKDPKVLQSYYYAITDFSVGGRCKCNGHASECAPNKAGQLACLCQHNTT
GVDCEQCQAFYQDRPWARGTAESANECLPCNCSGHSDECFYDRELYRSTGHGGHCRHCRD
NTDGPHCERCRPNFYRWDGWAACQPCSCNVAGSLQLQCDSSGACPCKATVTGWKCERCQD
GFHSLSEGGCRPCDCDPAGSLGTCDPNSGRCTCKEKVEGHLCNICQPGSFNLQPHNPAGC
TSCFCYGHSNVCTVAAGYEVHRIHSDFSQGPEGWKAEAPGGKETPLHWTKGKIYLEQEPV
DFIAPEKFLHDQRLSYGQLLSLRLQVEGNETGSSVFPIGLVLEGHSIVVSSSFSALPGGD
SQSLPTEHEATFRLHEAEMEPSLSSFDFQHLLSNLTALRIQAGSSQAPCRVSLHEVQLTS
ARPGLSSPTPWVEDCVCPQGYVGQFCDSCAPGFKREAPFGGPFSSCIPCTCNQHGSCDPN
TGHCQCVHHTEGPSCERCAPGFHGNPFVGHVDDCKPCPCPGGSPCMEILESGEVVCTHCP
PGQRGRRCELCDDGLFGDPVGRDGPIRPCSPCQCNGNVDPNAVGNCDPVSGRCLRCLYNT
TGEHCERCQEGFYGNPLASSPTGKCASCRCDPGGSAQGLETCDPITGQCPCLQHVTGRDC
SRCQHGYYDLQPGAGCKSCKCNLVGSQESQCHLLTGQCPCRPGVEGRPCDRCQPGFFGFS
MKGCRACHCSPLGSVTPQCHENSTCICKRGFVGYKCDQCQVNYYYDQERAQCQECPVCYS
LVQDEADKLRAKLQKMEEWLQKPDCSSPQPRSPMLGEEPRGDSLPSRYLLQGAKAMFLEQ
VAQLEGSVSAAWGRLRNASGAVGCVSSGSDKTCILLSEISTVLRSAQQEIQQAAATLTTM
VFPQEISKEPTSWGRLALESRALAESHRVTAAQVESVARRALLASNASYILLQSILEDNS
TLEARSELEDRYQDIQQAQEELAASALEAMTEAKRAFTSIRQATADMAKNLSQWKAPELP
PLMLQAGALSQELEELEQAVEEKGHLAVEASHALAAASRLELQKALSFEQLREQADTALT
LAASSVSHGKNVVSEAKSLLSNLEGAKKALVRQKSQAILSRKMAMVQDRAITDAQRKTKQ
AERMLGNAPSVSSMTKKTVKEVERVTRESTKRAQALMTEGKQEHRHSRELAKRVNRTLLE
LSRQERASEELRGELEQAGQVLPDVSDADKSLREAQRLLETDIQTLNNLLSSLDAAAPME
AMLNASRLQLAHLRLRLAEPGSLAKKLSHLQREAEQQQQQIEAFESDLAEVLADKQNLEA
ILQSLPEGCSSWQ
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagccccttgcctctgcctgctggctgctgtgctgagcctgggcctgcgccct
gccacggggggcatggactcctgctacgatgcacaggggcgagcccggcgctgcatgccc
gtcttcgagaacgcagcgtttggccgggaggtgcaggtgaccaacacgtgcgggtccccg
ccagaggactactgcctccagatggacgacgggcgctccacccagctgtgccgtcgctgt
gacatgggcgaccccctgcaccaccataatgccacctacctgaccgacttccacagccag
gaggagagcacctggtggcagagccagtccatggcctttggggtccagcaccccaactct
gtcaacatcaccctccgcctggggaagtcgtacgaaatcacctacgtgcggctgaagttc
cacaccagccggccggagagctttgccatttacaagcgtagccgcgccggcgggccctgg
gtaccataccaatactacagcgcttcctgcaggaagacgtacgggaaacgggagaggcag
tacctgcggcccggtgaggacgagcatgtggccttctgcactgaggagtttagcgacatc
tccccgctgagtggagggaacgtggccttctctaccttggagggccggcccagcgcctac
agctttgaccagagccccgttctgcaggactgggtgactgtcaccgacctgctcatctcc
ttgaaccggctcaacacatttggggatgacatcttcaaggaccccaaggtgctgcagtcc
tactactatgccatcacggacttctccgtaggcggcaggtgcaagtgcaatggccatgcc
agcgagtgtgccccaaacaaggctgggcagctggcttgcctctgccagcacaacaccacc
ggcgtggactgtgagcagtgccaggccttctaccaggaccggccgtgggcacgtggcaca
gcggagtctgctaacgaatgcctcccatgcaactgcagcggacactcagacgagtgcttc
tatgaccgggagctgtaccgcagcactgggcatggcgggcactgccgccactgccgggac
aacacagatgggccacactgtgagcgctgtcggccgaacttctaccgctgggatgggtgg
gcagcctgccagccctgcagctgcaacgtggcagggtccctgcagctccagtgtgacagc
tctggagcctgcccctgcaaggccaccgtgaccggctggaagtgcgagcgctgccaggac
ggcttccactccctcagtgaagggggctgcaggccctgcgactgtgatcccgccggcagc
ttggggacgtgcgaccccaactcagggcgctgcacctgcaaggagaaggtggaagggcac
ctgtgcaacatatgccagcctggttcatttaacctgcagcctcacaaccctgctggctgc
accagctgcttctgttatggccactcgaatgtgtgcacagtggctgccgggtacgaggtg
catcgcatccactccgacttcagccaagggcccgagggctggaaagctgaggcaccaggt
ggcaaggagacacctctgcattggaccaaggggaagatctacctcgagcaggagccagtg
gatttcatcgcaccagagaagttccttcatgaccagcgcctcagctacgggcagctcctc
tcactgcgcctccaggtggaggggaacgaaactggatcctctgtgtttcccatcgggctg
gtcttggagggacacagcattgtggtgtcttcgagcttctcagcactgccaggcggggac
agccagtccctccccaccgagcatgaggccaccttcaggctccatgaggcagagatggag
ccctcgctgtcatccttcgacttccagcacctgctttccaacctgactgccctccggatc
caggctggtagcagccaggcaccgtgcagggtctccttgcacgaggtccagctcacctct
gctcgcccggggctatcctcgcccacgccctgggtggaagactgtgtctgcccacagggc
tatgtcgggcagttctgcgattcctgcgcacctggtttcaagagagaggctcccttcggc
gggcccttctccagctgcatcccttgcacctgtaaccagcacggcagctgtgaccccaac
acagggcactgccaatgcgtgcaccataccgagggtccctcctgcgaacgctgtgcccct
ggcttccatggcaaccccttcgtggggcacgtcgatgactgcaagccgtgcccctgccct
ggcgggtcgccctgcatggagatcctggagagcggcgaggtggtgtgcacccactgcccg
ccagggcagagaggcaggcgctgtgaactctgtgacgatgggcttttcggtgaccctgtg
ggacgggacggtcccatccgcccttgcagcccctgccagtgcaacgggaatgtggacccc
aacgccgtgggcaactgtgaccctgtctctggccggtgcttgaggtgcctatacaacacg
acaggagagcactgcgagaggtgccaggaaggcttctatgggaacccactggctagcagc
cccaccgggaagtgtgcctcttgcagatgtgatcctggcggttcagcccaggggctggag
acctgtgatcccatcactggccagtgcccttgcctccagcacgtgactgggcgagactgc
agccgctgccagcacggatactatgacctgcagccaggggctggatgcaagagctgcaag
tgcaacctggtgggttcccaggagagccagtgccacctgctcacggggcagtgcccctgc
cgcccaggtgtagaggggaggccatgtgaccgctgccagcctggcttctttggtttctcc
atgaagggctgccgagcctgtcactgctccccgctgggctccgtcacgccccagtgccac
gagaacagcacgtgcatctgcaagcgaggctttgtgggctacaagtgtgatcagtgccag
gtaaactactactacgaccaggagcgggcccagtgccaggagtgtcctgtctgctacagc
ctggtgcaagacgaggctgacaagctgagggccaagctgcagaagatggaggagtggctg
cagaagccagactgcagcagcccccagccccgttccccaatgctgggagaagagccgcgc
ggagacagcctccctagtcgctacctgctgcaaggtgccaaggcgatgttcctggagcag
gtggcccagctggagggctcagtgagcgctgcgtggggtcggctgaggaacgccagcggg
gccgtgggctgtgtcagcagcgggagtgacaaaacctgcatcttgctgtcagagatcagc
accgtgctgcggtccgcgcagcaggagatccagcaggctgccgccacgctaacgacaatg
gtttttcctcaagagatttcaaaggagcccacgagctggggccgcctggcactggagtcc
cgggcgctagcggagagccacagggtgacagcagcacaggtggagtctgtagctaggaga
gcgctgctggcttccaatgccagctatatcctcctgcagagcatcctggaggacaactca
accctggaggccaggagtgaactggaggacaggtaccaggacatccagcaggcccaggaa
gaactggctgccagtgcgctggaggcaatgaccgaagccaagagggcctttacatctatc
cgtcaagccactgcagacatggccaagaacctgtcacagtggaaagccccagagctgccc
cccctgatgctacaggctggagccctcagccaggagctggaggagctggagcaggcggtg
gaggagaaggggcatctggctgttgaagcatcccatgctctggcagctgcctcgcgcctg
gagctgcagaaggctctgtcgtttgagcagctgcgagagcaggcagatacagctctgacc
ctggcagcctcctctgtgtcgcatgggaagaacgtggtttcagaagccaaatccctgctg
tccaacctggaaggggcaaagaaagcactggtgcgtcagaagagccaggccatcctgagc
aggaagatggcgatggtccaggacagagccatcaccgacgcccagaggaaaaccaagcag
gcagagaggatgctaggaaatgctccatctgtttcctccatgaccaagaagacagtcaaa
gaagtggagagagtcacaagggagagcaccaagagagcacaggcattgatgacggagggg
aagcaggagcacaggcatagccgcgagcttgccaagcgcgtaaaccggaccctgctggaa
ctctccaggcaggagcgggcatccgaggagctccggggtgagctggagcaggccggacag
gtgctgccggatgtcagcgatgcagacaagagtctcagagaagcccagcgcttgctggag
acggatattcagaccctgaacaacctgctcagcagcctggatgcggcagcccccatggag
gccatgctcaatgccagccgcctgcagctggcccatctccggctgcgacttgccgagccc
ggctccctagcaaagaagctgagccacctgcagcgggaggcggagcagcagcagcagcag
attgaggctttcgagagcgacctggcggaagtccttgccgacaagcagaacttggaggcc
attctgcagagcctgcctgagggctgctccagctggcagtga
DBGET
integrated database retrieval system