Alligator mississippiensis (American alligator): 102568310
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Entry
102568310 CDS
T03087
Symbol
SNW1
Name
(RefSeq) SNW domain containing 1
KO
K06063
SNW domain-containing protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03040
Spliceosome
amj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102568310 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102568310 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102568310 (SNW1)
Spliceosome [BR:
amj03041
]
Complex B
Other components
Prp19-related factors
102568310 (SNW1)
Complex C
102568310 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
Motif
Other DBs
NCBI-GeneID:
102568310
NCBI-ProteinID:
XP_006263839
UniProt:
A0A151M5I2
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All DBs
Position
Un
AA seq
536 aa
AA seq
DB search
MALTSFLPAPTQLSQDQLELEERARAQRSRQTALVSSRREPPPYGYRKGWIPRMLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAIKEITEKTRAALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSSEVQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPNKNVDKDMYGDDLEARIKTNRFVPEKEFSG
SDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttgccagctccaactcagctgtctcaggaccagctagaatta
gaagaaagagcaagagctcagcgatcaagacaaacagcactggtttcatcacgcagagaa
ccgcctccatatggttatcggaaaggatggataccacgaatgctggaggattttggagat
ggaggggcttttccagaaatccacgtggcccagtacccattggatatgggccgaaagaag
aaaatgtccaatgctttggcagttcaagtggatgcagaaggaaaaataaaatatgatgcg
atagctcgacaaggacagtcaaaggacaaggtaatttacagcaaatatacagacctggta
ccaaaagaggttatgaatgtggatgaccctgaactgcaaagacctgatgaggaagcgatt
aaagagataactgagaaaacaagagcagctctggagaaatcggtctcccagaaagttgct
gcagctatgcctgtccgagctgctgacaaactagctcctgctcagtacatcaggtacaca
ccatctcagcagggtgttgccttcaactctggagcaaaacagagggttattcgaatggta
gagatgcagaaggaccccatggagcccccaagattcaagattaacaagaaaattccccgt
gggccaccttctcctccagctcccgtaatgcactctcccagcagaaagatgaccgtgaag
gagcaacaagagtggaaaattcctccgtgcatttcaaactggaaaaatgcaaagggttac
accattccattagacaagcgtctggctgcggatggcagaggactgcagactgttcatatt
aatgaaaacttcgccaagctggctgaggctctctacattgctgacagaaaggctcgtgag
gctgtggagatgcgtgcccaggtggagagaaaaatggctcaaaaagaaaaagaaaagcat
gaggaaaagctccgagagatggcccagaaagctagggaaaggagagcagggatcaaaacc
catgtggagaaagaggatggagaagctagagagagagatgaaatcagacatgaccggcgc
aaagagagacagcatgacaggaatctttccagagcagcccctgacaagaggtcaaagctg
cagagaaatgagaacagagatatcagtgaagttattgctctaggtgttcccaaccctcga
acatctagtgaagtccagtatgaccagaggcttttcaaccagagcaagggtatggatagt
ggctttgctggaggagaagatgaaatttacaatgtctatgaccaaccctggagaagtggt
aaagacatggcccaaaacatttacagaccaaacaaaaatgtggataaggacatgtatggt
gatgatctagaggctcgaataaagacaaacaggtttgttcccgagaaggaattttctggc
tctgaccgtagacagaggggcagagagggaccagttcagtttgaggaagatccatttggt
ctggataagttcttagaagaagccaaacagcatggaggttccaagaggccgtctgatagc
agccgccctaaggaacatgagcatgagggcaagaagaggaggaaggagtga
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