Alligator mississippiensis (American alligator): 102568346
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Entry
102568346 CDS
T03087
Symbol
IGHMBP2
Name
(RefSeq) immunoglobulin mu binding protein 2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amj03009
]
102568346 (IGHMBP2)
03012 Translation factors [BR:
amj03012
]
102568346 (IGHMBP2)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102568346 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
102568346 (IGHMBP2)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
Other ribosome biogenesis factors
102568346 (IGHMBP2)
Translation factors [BR:
amj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102568346 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Helicase_RecD
ResIII
Viral_helicase1
nSTAND3
DEAD
AAA_16
UvrD-helicase
Flavi_DEAD
AAA_22
SLFN-g3_helicase
IstB_IS21
AAA_25
AAA
DnaB_C
PhoH
ABC_tran
VWA_2
Zot
NTPase_1
AAA_33
UvrD_C_2
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
102568346
NCBI-ProteinID:
XP_006275117
UniProt:
A0A151NY62
LinkDB
All DBs
Position
Un
AA seq
988 aa
AA seq
DB search
MPTRSFATRQLQLLQEEREAEISEARTWRENISLKELQRRGVCLLKLQAASQRTGLYGRL
LVTFQPRKYESDVELPYNSFGPGDIVGLYESTDQGDPLSTGIVTHVTPKLVTIAFEESRD
GLLSLDRESSYRLLKLANDVTYKRLKKALNTLSQYHSGPAFNLIDVLFFSSDPSPPSETR
PLKFYNELLDISQQEAVSFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQGLKVLCCAP
SNVAVDNLVERLAAYKVRILRLGHPARLLESIQHHSLDAVLARGDNAQIVADIRKDIDQA
FAKTKRTQDKGERSHFLNEIKTLRKELKEREETAMTTVLTQADVVLATNTGASPDGPLKL
LPENHFDLVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIISHKAAAKGLSLSLM
ERLIQKYGESIVRMLTVQYRMHQAIMQWASTEMYGGRLTAHPSVAHHLLKDLPGVASTEE
TRIPLLLVDTAGCGLFELEVEDEQSKGNQGEVHLVGLHVQALVNAGVKAKDIAVIAPYNL
QVDMLREHLCHKYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSRTVSNQVFLKRLVDYFGEHGEVRTAFEYLDDIVPENYSHENSQGHPEQG
EGPKTVPLSTPKPQPHGQKAKPAPGKPILPKPSIGPAESMNGTGKERMEVKDNSAKFKAM
LVDFLESSKAQLDFPPSLNSHDRMLLHQMAEEYGLQHVSTGEGRQRYLSIRKRPPATVSA
TVTNKANEQAPSSESERTPREAPSPGQTGGSSMSSGKVDLKMLHLKRMQWEKAKWEERVR
RTQESSVNLVETAGKKHKNEAKGKSATKADNTTAEEDIDTLISAVVKADNTCGFPRCKAS
VTTLGQLCLHCNKRYCLSHHIPEVHGCGEKAKVHARQRISKEGVLYAGSGSKDKSLDPTK
RAHLQRRLDKKLNELSNQRKSKKKDQEK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgccgacacgaagcttcgcgacgcggcagctgcagctgctgcaggaggagcgggaggct
gagatcagcgaggccaggacatggcgagaaaacatctccttgaaagaacttcagcgcagg
ggggtctgcttgctgaaactgcaagcggccagtcaaagaactgggctgtatggacgactg
cttgtaacttttcagccgagaaagtatgagtcagatgtggagttgccctataacagcttt
gggcctggtgacattgtgggtctttatgagtccactgatcagggtgatcctctctcaact
ggaattgtgacccacgtaacccccaagttggttaccatcgcctttgaggaatctcgggat
ggcctgttaagcttggacagggagagttcttatcgcctgctgaaattggccaatgatgtc
acctacaagaggctgaaaaaagctttaaatacattaagccagtatcactctggtccagca
ttcaatcttatagatgtcctcttcttttcctctgatccaagtccaccgagtgaaacacgg
cctttaaagttctacaatgaattgctggatatctctcagcaggaagcggtgtccttttcc
ctggcacagaaagaacttgccattattcacggaccacccggcactggcaaaaccaccacg
gtggtagaaataatactccaagctgtgcagcaaggcctgaaggtcctgtgctgtgcccca
tcaaatgtggcagtagataatctagtggagagacttgccgcttacaaggtgaggatcctg
cgtctgggtcacccagctcgtctcctggagtccatccagcatcattccctggatgcggtt
ttggcccgtggagataacgcccagatcgtggctgacatcaggaaggatattgaccaggca
tttgccaagaccaaaaggactcaagacaagggagagagaagccattttctaaatgagata
aaaaccttgagaaaggagctgaaggagcgagaagaaactgctatgactacagtccttacc
caggctgatgttgttcttgccacaaacacaggtgcttcccctgatggccccctgaagcta
cttcctgaaaatcactttgatctggtagtgatcgatgaatgtgcccaggcccttgaagca
agctgctggatacctctgctgaaagccagaaagtgcatcctggctggggatcacaagcag
ctaccacccacaatcatatctcacaaggctgccgccaaaggtctttctctcagtttaatg
gagcgtctaattcagaaatatggagagagcatcgtgaggatgctgactgtgcaatatcgg
atgcatcaagccataatgcagtgggcttccacagaaatgtatggtggccgactcacagct
cacccttctgtggctcatcatttgctgaaggacctgccgggagttgcttctactgaagag
actaggataccattactgctcgtagatactgctggttgtggtttatttgaacttgaagtg
gaagacgagcagtctaaagggaaccaaggggaggtgcaccttgttggcttgcatgtccaa
gcattggtgaacgctggtgttaaagcaaaagacattgctgtcattgctccttacaacctt
caggtagacatgctaagagagcacctgtgtcacaagtatccagagctagaaattaaatca
gttgatggtttccagggaagggaaaaggaggctgtcatactgtcctttgtgagatccaac
aggaagggggaggtgggctttctcgccgaagatcggagaataaacgtggccgtcacccgt
gcgcgacgccacgtggcagttgtctgtgactctcgaaccgtcagcaaccaggtctttctg
aagcgactagtggattacttcggtgagcatggggaagtgcggacagccttcgagtacctt
gatgacattgtgccagaaaactactctcatgagaactctcagggtcaccccgagcaaggg
gagggacccaaaactgttccattgtccactccaaaacctcagccccatggccagaaagcc
aaaccagctccaggaaaacccattctcccaaagccaagcataggtcctgcagagagtatg
aatggcactgggaaggagaggatggaggtaaaggacaattcagccaagttcaaggccatg
ctagtggatttcctggagagcagcaaggcccagctggatttccctccttctttaaattct
cacgacaggatgctgctccaccaaatggctgaagaatatgggctacagcatgtcagcact
ggcgaagggagacagcggtacctcagcatccgcaagagaccccctgccactgtctctgct
acagtgactaacaaagccaatgagcaggctccatcctctgagtcagaaaggaccccaaga
gaagcccccagccctggtcagacaggagggagcagcatgagctcagggaaagtcgatctg
aaaatgctgcacctgaagaggatgcaatgggaaaaagccaagtgggaagagagggtgaga
agaacccaggagtcaagtgtgaatctggtagagacagcaggaaagaagcacaaaaatgaa
gccaaaggtaagagtgccacaaaagcagacaacactacagctgaagaagacatcgacacc
ttgatttctgctgtggttaaagccgacaacacctgtggtttcccccggtgtaaagccagc
gttaccaccttgggacagctttgcctgcattgtaacaaacgctactgccttagccatcac
atcccagaggttcatgggtgtggggagaaagccaaagtgcatgcacggcagaggatcagc
aaagaaggggttctctacgctgggagtggatcaaaagacaagtctctggacccaaccaaa
agagctcacctgcagagacgcctcgataaaaagctgaatgaattaagcaaccagagaaag
agcaaaaagaaagaccaggagaaatga
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integrated database retrieval system
