Alligator mississippiensis (American alligator): 102568473
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Entry
102568473 CDS
T03087
Symbol
LINGO1
Name
(RefSeq) leucine rich repeat and Ig domain containing 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102568473 (LINGO1)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102568473 (LINGO1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
102568473
NCBI-ProteinID:
XP_006272459
LinkDB
All DBs
Position
Un
AA seq
619 aa
AA seq
DB search
MRVRDRMIAGEASMHSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERSVLCHRKR
YLSVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNSLFNL
RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY
ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIKDYSFKRLYRL
KVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIIT
IEGSMLHDLLRLQEIQLVGGQLTTVEPYAFRGLNYLRILNVSGNLLTTLEESAFHSVGNL
ETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTC
RRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPAIMWLSPRKHLISTKTNGRLTVFPDGT
LEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDA
NSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRK
SDAGITSADAPRKFNMKMI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagagataggatgatagctggggaggcgagcatgcatagcccaatcctggcc
tgctggcagcctattctcctcctgatgctgggctccatcctctccggctctgccacgggc
tgcccgccccgctgtgagtgctctgcccaggagcgctctgtgctgtgccaccgaaagcga
tacctatccgtccctgaggggatcccaactgagacccggctcctggacttgggtaagaac
cggatcaagacgctcaaccaggatgaattcgccaactaccctcacttggaggagctggaa
ttaaacgagaacattatcagtgccattgagcctggggctttcaacagcctcttcaacctc
aggactctgggtctcaggagtaacagactcaagctcatcccactgggggtgtttaccgga
ctcagcaatcttaccaagctagacattagtgagaacaaaattgtgatcctcctagattac
atgttccaggacttgtacaacctgaagtcattagaggtgggggacaacgacctggtttac
atctcccaccgggcctttagcggccttaacagcttggagcagcttacactggaaaaatgc
aacttgacctccatccccacggaggcactatcccacttgcacggcttgatcgtgctgagg
ctgcggcacctgaacatcaatgccatcaaggattactcatttaagaggctatacaggctt
aaagtcctggagatctcccattggccctacctggataccatgacgtccaactgcctttat
gggctgaacctcacgtctttgtccatcactcactgcaatctgacttccatcccatacgtg
tccgtgaggcacttggtttatctcaggttcctgaacctgtcttacaaccccattatcacc
attgagggctccatgttgcatgacctgctcaggctgcaggagatccagctggtgggcggg
cagctcaccaccgtggagccctatgccttccgaggcctcaattacttgcgcattctgaac
gtttctgggaacttgctgaccacgctggaggagtcggccttccactcggtggggaatctg
gagacactcattttggataacaaccctttggcctgtgactgcaggctgctttgggttttc
cgacgccgctggaggttgaatttcaacaagcagcagcccacctgctccacgcctgagttt
gtccagggaaaagagttcaaggacttccctgatgtgctgctgcccaactacttcacctgc
cgccgggcgcggatacgtgaccgcaagccgcagcagatctttgtggatgagggccacaca
gtacattttgtctgccgggcagatggggacccaccccccgcaatcatgtggctctctccc
aggaagcacctcatctctaccaaaaccaatggacggctcaccgtcttccctgatggcact
ctggaggtgcgctatgcccagatccaggacaatggcacctacctatgcattgccagcaac
gcgggtggcaatgacactatgctggctcacctgcacgtgcggagctactccccagactgg
ccccaccagcccaacaagacctttgctttcatctccaaccagcccaacgagagtgacgcc
aacagcacacgtgccacggtgcctttccccttcgacattaagactctcatcattgccacc
accatgggcttcatctccttcctgggtgtggtgctgttctgtctggtgctcctcttcctg
tggagcagggggaaaggtaacactaagcacaacattgagatcgagtatgtgccgcgcaaa
tctgatgctggaatcacctctgctgacgcgccacgcaagttcaacatgaagatgatctag
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