Alligator mississippiensis (American alligator): 102568603
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Entry
102568603 CDS
T03087
Symbol
ATG16L1
Name
(RefSeq) autophagy related 16 like 1
KO
K17890
autophagy-related protein 16-1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04136
Autophagy - other
amj04140
Autophagy - animal
amj04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102568603 (ATG16L1)
04136 Autophagy - other
102568603 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102568603 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102568603 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
amj03029
]
102568603 (ATG16L1)
Membrane trafficking [BR:
amj04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102568603 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
102568603 (ATG16L1)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102568603 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
INO80F
CCDC93_CC
WD40_like
PALB2_WD40
Peptidase_M15_4
V_ATPase_I
HTH_6
HEF_HK
Fez1
Motif
Other DBs
NCBI-GeneID:
102568603
NCBI-ProteinID:
XP_006261857
UniProt:
A0A151NTZ1
LinkDB
All DBs
Position
Un
AA seq
607 aa
AA seq
DB search
MSAGLRAAAFPAWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKSDLHAVVADKLQAEK
QDLQSRHEISPGHDGTWSEAQLQELAQLRIKYQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQLNEAKIAEYLQKISELETECQELHNKLQDLEQANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLSVEQDDDI
EVLADETSDPAEETSPVRAVSRTSSKRFSQPTGGLLDSITNIFGRRSLSSFPIPQDNVET
HPVSSKEVRVPSTAVCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCELKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVMSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRSES
IVQELELLGRITALDLNPERTELLTCSRDDLLKIIDLRVNAVKQTFSAQGFKCGSDWTRV
VFSPDGTYVAAGSADGTLYIWNVLTGKVERALAKHHSSSINAVAWSPAGAHVVSVDKGNK
AVVWSEF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggggctgcgagccgccgccttccccgcttggaagcgccacatcgcggaggag
ctgcggcggcgggaccggctgcagaggcaggccttcgaggagatcatcctgcagtataac
aagctgctggagaagtcggatctccatgcagtggtggcagacaagctacaagcagaaaaa
caggatttgcaaagcaggcatgagatcagtccagggcatgatggtacatggagtgaagct
cagttgcaggaactggcccagctgagaattaagtatcaagaggagctgacggagctgcat
aagaaacgtggtgagttggcccagtctgtaatagatttgaataaccaaatgcagcagaaa
gaccgagagatgcagctgaatgaagcaaaaattgcagagtatttgcaaaagatctctgag
ctggaaacagagtgccaggagttacacaacaaactgcaggatcttgagcaagctaatcaa
acattgaaggatgagtatgatgcccttcagatcacctttaatgctctagaagagaaactg
aggaaaaccactgaagacaaccaagagctggtctcacgttggatggcagaaaaggctcag
gaagccaatcgtctcaatgcagaaaatgagaaagattcaaggagacggcaagccagactg
cagaaagaactggcagaagctgccaaagaacctctgtctgttgaacaggatgatgatatt
gaagtccttgcagatgaaacctctgacccagctgaggagacatccccagttcgagctgtg
agccggacttccagtaagcgattctcccagccaactggaggccttctggactctatcact
aatatctttgggaggcgctctctgtcctcattccccatcccccaagacaatgtagagacg
catccagtctccagcaaagaagtgagagtgcccagtactgctgtatgtgtttttgatgca
catgacggggaagtgaatgcagtgcagttcagtcctggctctcggttactagcaacagga
ggcatggaccggagggttaaactctgggaggtctttggagataagtgtgagctaaagggc
tccctctccggtagtaatgcaggaattacaagcatcgagtttgacagtgctggctcttac
cttttagcagcttcaaatgactttgccagcagaatctggacagttgatgactatcggtta
cggcacaccctgacaggtcacagtggtaaagtcatgtcagccaagtttttgttggacaat
gcgcgtattgtttctgggagccatgaccggaccctcaagctttgggacctgcgcagcaaa
gtttgtataaaaacagtgtttgcaggatctagctgcaatgatatagtctgcactgagcag
tgtgtaatgagtggacattttgacaagaaagttcgcttctgggacataaggtctgaaagc
atagtacaggagttggaactgcttgggaggatcactgctttggacctgaatccagagaga
acagagctcttaacctgttcccgagacgacttgctgaagatcattgatctacgggttaat
gctgtcaaacagaccttcagcgcccagggattcaaatgcggatctgactggaccagagtt
gtattcagccctgatggcacctatgtggcagctggttcagctgatgggaccctgtacatt
tggaatgtgctcactgggaaggtggagagagctcttgcaaagcatcacagctcctctatc
aacgcagtggcatggtcaccagccggtgctcatgtggtcagtgtggacaaaggaaacaag
gctgtcgtgtggtctgaattttga
DBGET
integrated database retrieval system
