Alligator mississippiensis (American alligator): 102568650
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Entry
102568650 CDS
T03087
Symbol
SPTBN1
Name
(RefSeq) spectrin beta, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04517
IgSF CAM signaling
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102568650 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102568650 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102568650 (SPTBN1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102568650 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102568650 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
102568650
NCBI-ProteinID:
XP_006274502
UniProt:
A0A151MGH4
LinkDB
All DBs
Position
Un
AA seq
2349 aa
AA seq
DB search
MEVQKAGSMPGPLSPGYAAQVPYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARVSC
RITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENM
GSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNV
NIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDP
EDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASD
LLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKM
RANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAM
RETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVARELETENY
HDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLS
QDYGKHLLGVEDLLQKHALVEADIAVQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRV
AHMEFSYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSI
IRLLSKHKAFEDEMSGRSGHFQQTVKEGEDMIAEEHFGSEKIKERIKDIREQWANLEQLS
AIRKKRLEEASLLHQFQADADDIDAWMLDILRIVSSNDVGHDEYSTQSLVRKHKDVAEEI
ANYRSVIDSLHEQAKALPQEHAESADVQGRLSGIEERYKEVAELTRLRKQALQDTLALYK
MFSEADACELWIDEKEQWLNSMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIAR
QLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNYHLECNETKSWIRE
KTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAI
LSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNT
LAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNE
LHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQED
FMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNREAASELLMRLKD
NRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELGSNKEWLDKI
EEEGMQLIAEKPETEVIVKEKLTGLHQMWEELESTTQTKAQRLFDANKAELFTQSCADLD
KWLNGLECQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQSQAQALSQEGKST
DEVDGKRLIVEQKFLELLEPLTERKANLLASKEIHQFNRDVEDEILWVGERMPIATSTDH
GHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDSSPNAEAIQQRLGDLQQLW
NLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKH
QILEQAVEDYAETVHQLSKTSRTLVADSHPESERISMRQSKVDKLYAGLKDLAEERRGKL
DERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQER
VDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDA
KEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAY
AGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQI
EAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQ
LTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEK
LIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPSPEPSPKVTDDAD
SQQQWDGTKGEQISQNGLPSDQESPRMAETVETNEMVNGAAEQRTSSKESSPVPSPTTDR
KAKTAFQAQTAATLPAKTQETPSAQMEGFLHRKHEWETHSKKASSRSWHNVYCVINNQEM
GFYKDSKAAASGIPYHNEIPVSLKEAVCEVAVDYKKKKHVFKLRLSDGNEYLFQAKDDEE
MNTWIQAITSAISSDKIEVSPSTQSTPASSRAQTLPASVTITSESSPGKREKDKEKDKEK
RFSLFGKKK
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcagaaagcaggcagcatgcccgggccgctgtctcccggctacgccgcgcag
gtgccctacaactacaaccagctggaagggaggttcaagcagctgcaagatgaacgtgag
gcagttcagaagaagactttcacaaagtgggttaattcacacttggcacgtgtatcatgc
agaattacggatttatacgccgaccttcgcgatggacggatgcttatcaaactgctggaa
gttctttcaggagagagacttcccaaaccaacaaagggaaggatgcgcatccattgtttg
gaaaatgttgataaggcccttcagtttctgaaagaacaaagagtgcatctagaaaatatg
ggatcccatgatattgtggatgggaatcacaggctgactcttggccttatttggaccatt
attctgagattccagatccaggatatcagtgttgaaactgaagataacaaagagaagaag
tctgctaaagatgctttgctattatggtgccagatgaagacagctggttatcccaatgtc
aacattcacaacttcactactagctggcgggacgggatggctttcaacgcactaattcat
aaacacaggcctgatctcattgattttgacaagctgaagaaatcaaatgcacactacaat
ctgcagaatgcttttaacctggcagagcaacaccttggtcttactaagcttttggaccca
gaggatatcagtgttgaccatcctgacgaaaagtcaattatcacctatgtggtgacatat
taccactacttttctaagatgaaagctttagccgttgaaggaaaacgtattggaaaggtg
cttgacaatgccatcgaaacagagaaaatgattgaaaaatacgaatcactggcttctgac
cttcttgagtggattgaacaaaccatcatcatcctgaataatcgcaaatttgctaactca
ctggttggtgtgcaacagcagctgcaggcattcaacacctatcgcacagtggagaaacca
cccaaatttacagaaaaaggaaacctagaagtgctgctttttaccattcaaagcaaaatg
agagcaaacaatcagaaagtgtacatgccaagggaaggcaaactcatctcggacattaac
aaggcctgggaaagactggaaaaagctgaacatgaaagagaactggcactgcgaaatgag
ctcataagacaagagaaactggaacaacttgcacgtagatttgatcgcaaggcagctatg
agagaaacctggctgagtgaaaatcaacgtttagtttctcaggataactttggttttgac
cttccagcagtggaggctgcaactaaaaagcacgaggccattgaaacagacattgcagca
tatgaagaacgagttcaagcagtggttgctgttgcaagggagcttgagactgaaaattac
catgatatcaaacgtatcactgcaagaaaggacaatgttatccgtttgtgggagtacctg
ctggagctgctcagggcacgtagacaaagactggagatgaaccttggtctgcaaaagata
ttccaggaaatgctttacattatggattggatggatgaaatgaaggtgctgctgctgtct
caggactatggcaagcatttgttaggggtagaagacctgttacagaaacatgccctagtg
gaggcagacattgccgttcaggctgagagagtgagaggggtcaatgcatctgctcagaaa
tttgccacagatggggaaggttacaaaccgtgtgacccacaagttatcagagaccgagta
gctcatatggagtttagttaccaagaactatgccagttagcagctgaacgccgggctcgc
ttggaagaatccagacgtttgtggaaatttttctgggaaatggctgaagaggagggctgg
atcagagaaaaggaacaaatcttgtcatctgatgactatgggaaggatctaactagtatc
atccgcctcttaagtaagcataaagcatttgaagatgaaatgagtggtcgtagtggccac
ttccaacagactgtaaaagaaggtgaagatatgattgctgaggaacactttgggtcagag
aaaatcaaggaacgaatcaaggacattcgggagcagtgggctaaccttgagcagctctct
gccattaggaaaaagcgcctggaagaagcctctttgcttcaccagttccaagctgatgcc
gatgatatcgatgcctggatgttggacatccttaggattgtctccagcaatgatgttggt
catgatgaatattccactcagtctttggtcaggaaacacaaagatgttgccgaagagatc
gcaaactatagatctgtcattgactctcttcatgagcaggcgaaggctctgccacaagaa
catgctgaatctgcagatgtgcagggcaggttgtctggaatagaggaaagatacaaagag
gtggctgaactgacccggctccgtaagcaagcattacaagatacccttgctctgtataag
atgttcagtgaagcagatgcatgtgaactttggattgatgaaaaggagcagtggcttaac
agtatgcagattccagagaagctagaagacctggaagtgatccagcacagatttgaaagc
ttagaaccagaaatgaacaatcaggcatcccgtgttgcagtggtaaatcagattgctaga
cagctgatgcacagtggtcatccaagtgagaaggagatcaaggcacagcaagataaactg
aacacaaggtggagccagttccgagaactggtagacagaaagaaggatgctcttatctct
gctctaagtatccagaactaccatctggaatgtaatgaaaccaaatcctggattagggaa
aaaaccaaagtaattgaatccacacaagatctgggcaacgatctggctggagtaatggcc
cttcagaggaagttgacgggtatggaacgtgatttggtagctattgaggctaagctaagc
gacctgcaaaaagaggcagaaaagctggaatctgagcatcctgaccaggcccaggccatc
ctgtcgaggcttgcggagatcagtgatgtgtgggaagagatgaaaaccaccctaaagaac
cgtgaagagtcccttggagaggcaagcaaactgcagcagttcttacgtgacttggatgac
ttccagtcctggctgtccagaacccagactgcgattgcctcagaagatatgccaaacaca
ttggccgaggctgaaaagctcctcactcagcatgagaatattaagaatgagattaacaat
tatgaagaagactaccagaaaatgagggacatgggtgagatggtaacacaagggcagact
gacgcacagtatatgttcttacgccaacgtctgcaggctttggacacaggatggaatgag
cttcacaaaatgtgggagaataggcaaagtctcctctcacaatcccatgcctaccaactc
tttctcagagataccaagcaagcagaagcatttctcaataaccaggaatatgttttggca
catactgaaatgcccaccaccttggaaggagcagaagctgctattaaaaagcaggaggat
tttatgaccacgatggatgccaatgaggaaaagatcaacgcagttgtagaaactggcagg
agactagttagcgatgggaacattaactctgacaagatccaagagaaggtggactctatc
gatgacagacataggaagaatcgtgaagcagccagtgagcttctgatgagattgaaagac
aacagggatcttcaaaagtttcttcaggattgccaggagctgtcactttggatcaatgag
aagatgcttacagcccaggatatgtcttatgatgaagcaaggaacttacacagcaagtgg
ttaaaacaccaggcattcatggcagaacttggatccaataaggaatggctggacaaaatt
gaagaggaagggatgcaactcattgcagagaagccagagactgaggtcatagtgaaagaa
aagctgacaggtctacaccaaatgtgggaggagcttgaatctaccactcagaccaaggct
cagcgactctttgatgcaaataaagcagagctgttcacccagagttgtgctgatctggat
aaatggctgaatggcttggagtgccagatacaatctgatgactatggaaaggatcttacc
agcgtcaacattctgttgaaaaaacaacagatgcttgagaaccaaatggatgttcgtaag
aaggagatagaagagctacaaagccaggcacaggctttgagccaggaggggaagagtact
gatgaggtggatggtaaacgtctaattgtagagcagaaatttttggaattactggaacct
ttaactgaaaggaaggcaaatctattggcctccaaagagatccaccagttcaacagggat
gtagaagatgagattttgtgggttggcgagaggatgcctatagcaacatctactgatcat
ggacataacctccagactgttcagctactaataaagaaaaatcagacacttcagaaagaa
atccaagggcatcagcctcgcatcgatgacatttttgagaggagccagaatatccttaca
gacagcagccctaatgccgaagcgattcagcagcgacttggtgacttgcagcagctgtgg
aacctcctaattgaggagacagagaaacgccacaagcgcctggaggagtctcacagagca
caacagtattacttcgatgctgctgaggctgaggcctggatgagcgagcaggagctgtat
atgatgtcagaagagaaagctaaggatgaacagagtgcagtatccatgttgaagaagcac
cagattttggaacaggctgtagaagactatgctgagacagtgcatcagctttccaagacc
agcagaactttggttgcagacagtcatccagaaagcgagcgcatcagtatgcggcagtcc
aaggtagataagctgtatgcaggcctgaaggatctagctgaagagaggaggggcaaactg
gacgagagacacaggctctttcagcttaaccgggaagtggatgacttggagcagtggatt
gctgagagggaggtggtggctggatcacatgagctgggacaggattacgaacatgtaacg
atgctacaagagcgattccgtgaatttgctcgagacactggaaacattggacaggagcgg
gttgatactgttaaccatatggctgacgagctcatcaattcaggacattctgatgctgcc
accattgcagaatggaaagatggtctcaatgaggcatgggctgacctgttggagctcatt
gacacaagaacacagattctagctgcctcttatgaactgcataaattttaccatgatgcc
aaggagatcttaggacgtatccaagataaacataagaagttacctgaagaacttggtaga
gaccaaaatacagtggaaacactacagagaatgcacacaacgtttgaacatgatatccaa
gctttgggcacccaggtgagacaactgcaggaggatgctgcacgtcttcaggctgcctat
gctggggacaaggctgatgacatccagaagagggagaacgaagtcctagaagcctggaaa
gctctgctagatgcctgcgagggacgcagggttagactggtagatacaggggacaaattc
cgtttcttcagcatggttcgggatctcatgctttggatggaagatgttattcggcagatt
gaagcccaggagaagccaagggatgtctcatctgttgaattactaatgaacaatcaccag
ggtattaaagcggaaattgatgcccgcaatgacagttttactacctgcattgaacttggc
aaatctctcctggcaagaaaacactatgcatcagaagagatcaaggaaaagctactgcag
ttgacagagaagaggaaagaaatgattgacaaatgggaagacagatgggaatggctgaga
ctcattttggaggtacatcagttttcaagggatgctagtgtggcagaggcctggctgctg
gggcaggagccatacctatccagccgtgagataggtcaaagtgtggatgaagtggaaaag
ttaattaagcggcatgaagcatttgagaaatctgcagctacttgggatgaaaggtttgca
gcactggaacgactgactacgttggagttactggaagtacgtcgacagcaagaggaagag
gagagaaagaggcaacctccttctccagagccaagtccaaaggtcacagatgacgcagat
tcacaacagcaatgggatggcacaaaaggagaacaaatttcccagaatggtttgccgtca
gaccaggagtctccacggatggcagaaacagtagagacaaatgaaatggtcaatggagct
gcagagcagagaacaagttcaaaagaatctagtcctgttccttccccaacaacagaccgc
aaagccaagactgcctttcaggctcagaccgctgctacccttccagccaaaacacaggag
accccatctgctcagatggagggcttcttgcaccgtaaacatgaatgggagacacacagc
aagaaagcctcaagcagatcctggcataacgtgtactgtgttataaacaaccaagagatg
ggcttctacaaagattccaaggctgctgcttctggcattccttaccacaatgaaatccct
gtcagtttgaaagaagcagtctgtgaagtagcagttgattacaaaaagaagaaacacgtg
ttcaagctaagactaagtgatggcaatgagtacctcttccaagccaaagatgatgaggaa
atgaacacatggattcaggcgatcacatctgctatctcctctgacaaaattgaagtgtct
ccaagcacacaaagcactccagcttctagtcgtgcccaaaccctgccagccagtgttaca
ataaccagcgaatccagtcctggcaagcgggagaaggacaaagaaaaagacaaagagaag
agattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
