Alligator mississippiensis (American alligator): 102568677
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Entry
102568677 CDS
T03087
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat domain 37
KO
K12600
superkiller protein 3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102568677 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102568677 (TTC37)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
102568677 (TTC37)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_12
TPR_14
TPR_CcmH_CycH
TPR_17
TPR_8
TPR_11
CFAP70_TPR_C
ANAPC3
ARM_TT21_C
CFAP70_mid_TPR
TPR_9
CABIN1_N
ARM_TT21_2nd
Fis1_TPR_C
TPR_15
TTC22_N
Rapsyn_N
BTAD
TPR_30
TolB_N
TPR_20
Motif
Other DBs
NCBI-GeneID:
102568677
NCBI-ProteinID:
XP_014452741
LinkDB
All DBs
Position
Un
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAQ
GAYRKATELEPGQLLAWQGLANLYEKSNQTDAKGDLASVYQKLLELYESDKQKWCEVCKK
LVELYHQEKKHLEAARTWHKLVKIKQEEGVDNAELHQLWKRMIQLLADSTQNQDNETQQL
LLTAFEHAVNSADMIPSEDHQILYRDFIQCLSKFPHETARLKKACDDMMVLYPTLSYPLE
ILCLHFIQSGTVTEEALHFCCRLMEMDSSSGPGFIGLGIKSLQEKKYEEAAKLLSEGLQK
TSHCPAAWYYLAEAQMKMQKYKEAVFSCNHALKMLEQLGDPDGLLEQKNLALHLKAEALI
KTLDADVAEDAISTLEQVPGVNSDPILLALKGRAYVNKSLINQASKVAQQIMSSHPHLAE
AHALEGLIHYTQKNYQQAERSFQSAIERKAEVAEYHHYLGLTYWSMGEETRKDKTKALSQ
FLKAAKLDSYMGSVFCYLGHYYRDVAGDKNRARGCYKKAFELNRSDGEAGSTAVDLSMEL
GDTETAIAILTSVTEKASAGAAKWAWIRRGLYYLRANQHSQAVADLQAALRADPKDSNCW
ESLGEAYLSRGGYTTALKSFTKASELNPESVYSIYQAAVIDQLLGRYKEAIAEYQKILKK
SKEYVSALKGLGECYLMVARAALADYLDDKALDFIEQSLEYFTRAAKCHPDVSCIWKLLG
DACTSVHVISTSKVNVKVLGYLIGQNTDKQTLKKSELLILGGRCYGRALKLMSLPNIWCD
LGINYYRQAQHLTAVGSDTNEISELLEKSVQCLKKAVRLDSKNYLYWNALGVVASCSAIG
NYALAQHCFIKSVQAEQINVVAWTNLGVLYLVNGHIEQAHEAFKVAQSLEPSYLLCWIGQ
ALIAERVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNSELYQYNIIQMHA
IPAAQVVLSKYTQRIQNDASAFTMLGYLNEYLQLKKQATGAYERAVSLLKNSEDKEKWSI
AMRNYGRSLCGIGQYDKAIQAYMSTSLRELDDLVGIALAYFKKGLLQESIKAYEKALSIA
ESEHDKAHILTALAIIEYKQSNVDAAKTLLFKCSILKEPSTESLQALCALGLAKQDATLA
TAALKELLKHVKGKDHLYERCLITSAVYALQGRNVGAQRQASKAIHTNPNNSALWSLLSQ
LVPLHTPQNAKGGAVAGCIAQILDLNQGKKALLNTAVNQLAAGCHLIEDEKNNPLKNIQK
AIHLYPDDPAAWAVLMASCHAENTVVCLSNTQLKRTDLEMTLVATVSAKIAGNNFPANYI
QALEVWSLCQAITGLKEMGRLTEAEALCTKGLKSCPEQSALFLLLRQIQCRQLLQSHKDL
PDAILEELRKTVMTNGSSVAAWHWLAKVYESQRMMVAAEMCYRKSLQLASQQGNWHGKLS
SLLRLAMLALEICMANVSNDHWPSLVQEATTEALKLSFCPLAVLLRALLQYSRKMGARET
RRMLEKVVYQPGYPETIVSVARWYLLKHLYSKDDYELIDVLIANAKANGDTRALELDKKL
SARS
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaggaggtaaagacagcactgaagagtgccagagaagcaattaggaataaa
gaatacaaagaagctttaaagcactgcaaggcagtgctgaaacaagaaaaaaacaactac
aatgcctgggtgtttattggcctggcagctgcagagttagaacagcctgatcaggcccaa
ggggcatacaggaaagctactgaacttgaaccaggccagttactggcatggcagggttta
gcaaatttgtatgaaaaatctaaccaaactgatgcaaaaggagacttggccagtgtctat
caaaagctcttggaactttatgaaagtgacaagcagaaatggtgtgaagtatgcaaaaag
cttgtggaactgtatcaccaagaaaagaaacatttggaggcagctcggacatggcacaaa
ttggttaagataaagcaggaggaaggtgtagataatgcagagcttcaccagctatggaag
aggatgatccagttactggcagacagtacacagaatcaagataatgagacacagcaattg
cttttgactgcatttgaacatgcagtgaactctgcagacatgattcccagtgaagaccat
caaattctgtacagagatttcattcagtgtttgtcaaaatttcctcatgaaacagctagg
ttgaagaaggcctgtgatgacatgatggttttgtatcctaccttgagttatcctttagaa
atactctgcttgcactttattcagtcaggtactgtcactgaagaagccctgcatttttgt
tgcaggcttatggaaatggactcaagcagtggccctggctttattggtttgggcatcaaa
tccctccaagaaaaaaaatatgaagaggctgctaagcttctgtctgaaggtttgcagaag
accagccattgtccagcagcatggtattatctggcagaggcacaaatgaaaatgcaaaaa
tacaaagaagctgtgttttcctgcaatcatgctcttaagatgttagaacagctcggcgat
cctgatggccttcttgagcagaaaaatcttgcgcttcatttgaaagcagaggctttgatt
aaaacattagatgctgacgtggcagaagacgccattagtactcttgagcaggtgcctggt
gtaaatagtgacccaatacttctggctcttaaaggtcgggcttacgtaaacaaaagcttg
atcaaccaagcttcaaaggttgcacaacagattatgtcatctcatcctcacctggcagaa
gcccatgctcttgaggggttgattcattacactcaaaagaactatcagcaggcagagaga
agttttcaaagtgctattgaaagaaaagctgaagtggcagagtatcatcactacttagga
ctgacttattggtccatgggtgaagagacaagaaaagataaaacaaaagctcttagtcaa
tttttgaaggctgcaaaattggacagctacatgggaagtgttttctgctatttaggccat
tactacagagatgtagctggagacaaaaacagagctcgtggctgctataaaaaggctttt
gaattgaatcgaagtgatggagaagctggatcaacagctgtagacttaagtatggaactt
ggagacacggagactgctatagcaatcttgacttcagtcactgaaaaagcaagtgctggt
gcagcaaaatgggcatggattcgtcgtggtctttactacctgagagccaatcagcattca
caagcagtagctgacttgcaggcagctctgagggcagatccaaaggactccaactgctgg
gagtctctaggggaggcctacttaagcagaggtggctatacgacggcactgaagtccttc
acaaaggctagtgaactgaacccagagtctgtttacagtatttaccaggctgcagtaatt
gatcagcttctaggaagatacaaggaagcaattgctgaatatcagaaaatcctgaagaag
tcaaaggaatatgtatctgccctaaaaggtctgggtgagtgctacctgatggtagcaagg
gctgcgcttgcagattaccttgatgacaaagcgctggacttcattgagcaatcacttgaa
tattttacacgagcagcaaagtgtcatcctgatgtatcttgtatctggaaactacttgga
gatgcgtgtactagtgtgcatgtgatttcaacatccaaagtgaatgttaaagttctagga
taccttattggtcagaacacagacaagcaaaccctgaagaaaagtgagctcctcatcctg
ggagggaggtgttatggcagagctttaaaattgatgtccttacctaacatatggtgtgat
cttggaataaattactatcgtcaggcacaacacctaacagcagtgggtagtgacacaaat
gagatcagtgaactgttagagaaatctgtacagtgtctcaaaaaagctgtgaggcttgac
agtaaaaactacctctactggaatgctcttggtgtggttgcttcctgtagcgctattggg
aattacgctcttgctcaacattgtttcatcaaatctgttcaagctgaacaaattaatgta
gttgcctggaccaacttgggggttttgtatctagtaaatggacacattgagcaagctcac
gaagccttcaaagtagctcagtctcttgagccctcatatttactgtgctggattgggcag
gctctcattgcagagcgtgtaggcagctatgatactatggatctgtttaggcacaccact
gaactcagtatgcatactgaaggagcaaaaggctatgcccattgggtatgctcaacgttg
caggataaaagcaaccgaaactctgagctgtatcaatacaacatcattcagatgcatgcc
attccagcagcacaggtggttttgagcaaatatacacaaagaattcaaaatgatgcatct
gctttcacaatgttgggttatttgaatgagtatctacaattgaaaaaacaggcaacaggt
gcatatgaaagagcagtatcattactgaagaactccgaagataaagagaagtggagcata
gcaatgcgaaattatggtagatcactgtgtggcataggccaatacgataaggccatccag
gcttatatgtcaacttctctcagagaacttgatgaccttgtaggaatagcattagcttac
ttcaaaaaggggcttctacaggaaagtattaaagcctatgaaaaagccttgtccattgct
gaatctgaacacgacaaagctcacatcttaacagcacttgcaataatagaatacaaacag
agtaacgtggatgctgcaaagacactgctgtttaagtgctctatattaaaagaacccagt
accgaaagtctgcaagcactttgtgctcttgggctggcaaaacaagatgctacgctagca
acagcagctcttaaagaactactaaagcatgtaaaagggaaagatcacttatatgagaga
tgccttattacatctgctgtatatgcactgcaaggcagaaatgtgggagcacagaggcaa
gcttccaaagctatccataccaatccaaataattctgccctctggtctctcttgtctcaa
ctagttcctctccatacaccacaaaatgcaaagggaggagctgtggcaggatgtattgct
cagatacttgatttaaaccagggaaagaaagccttactgaatactgcagttaatcagctg
gcagcaggctgtcatttaattgaagatgagaagaacaacccactaaagaatatccaaaag
gcaattcatctctatccagatgaccctgcagcctgggcagtgctaatggcttcctgccat
gctgaaaacactgttgtctgcttgagcaacacacagcttaagagaacagatttggaaatg
acacttgtagccacagtttcagccaaaattgcaggaaataactttccagctaattacatc
caagctcttgaagtctggtctctttgtcaagctattactggtttaaaagagatgggtaga
ctcacagaagctgaagctctctgtacaaagggtttaaaaagttgtcctgagcagtcagcc
ctgttcttacttttgaggcaaattcagtgtaggcagttgttgcagtcacataaagatctt
ccagatgccatcctggaggaactccgtaaaacagtcatgaccaacggctcttcagttgca
gcttggcattggctggcaaaagtatatgaatctcagagaatgatggttgcagcagagatg
tgttacagaaagagtctacagttggcatcacagcagggtaactggcatgggaagttatca
agtctgctcaggctagcaatgcttgccctggaaatctgcatggctaatgtttcaaatgat
cactggccatccttagtacaagaggcaacaaccgaagccttgaaactttccttctgccct
ctggcagttcttctgcgagcactgctacagtacagtcgcaagatgggagcaagggagact
cgtcgaatgttggaaaaagttgtgtatcagccggggtatccagaaactatagtgtcagtt
gcacgctggtacctcctaaaacacctatactccaaagatgattatgaattaatagatgtg
cttatagcaaatgccaaagctaatggagatacaagagctctggaactagataagaagttg
tcggcacgttcctag
DBGET
integrated database retrieval system
