Alligator mississippiensis (American alligator): 102568759
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Entry
102568759 CDS
T03087
Symbol
NHLRC1
Name
(RefSeq) NHL repeat containing E3 ubiquitin protein ligase 1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102568759 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102568759 (NHLRC1)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102568759 (NHLRC1)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102568759 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
Baculo_IE-1
zf-C3HC4_4
zf-C3HC4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102568759
NCBI-ProteinID:
XP_006263013
UniProt:
A0A151MNV0
LinkDB
All DBs
Position
Un
AA seq
400 aa
AA seq
DB search
MSAKASEKMQITMELVNETEISLLECKVCFEKYSHQKKHRPRNLPCGHVICLDCVCSLAH
PRNFRLECPFCRRVCKSSETSDCLPLLHLTEILRPATNIPSASGATAGASDEGIGSTSPG
LTFSLSFGGWGTLINPTGISICQRSGCVVVAHDGKKRIKLFGLSGSCIQQFGERGNAGND
IKYPLDVTVTLDGHVVVTDSGDQSVKVFDFDGRGKLVIQGPFHLPWGLDTTPENKIILTD
ANAGALYHLTADFKKGELKKIQKTQSNLCNPREVAVSQLSGVIAVIEHLLARGPNYSSTR
VKIFNADMTLIGQIDSFGLNLFFPSKIYVTAVTFDREGHIIVADVYNQIVLCLGKPEEFP
VFKPIITQGLAYPVALTYTANNSLIVLDNGDHSVKIYTAS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaggcttctgagaaaatgcagatcacgatggagctggtaaatgaaactgag
atcagtctgcttgaatgcaaggtctgttttgaaaaatatagccaccaaaaaaaacatcgt
ccaaggaacttaccctgtgggcatgttatatgcctggattgtgtgtgttcactagcacat
ccaaggaactttaggctggaatgccctttctgtcgaagagtgtgcaaatcgtctgagaca
agtgactgtttaccattgctgcacctaactgagatcttaagacctgcaactaatattcct
tctgcttcaggagcaacagctggggcaagtgatgaaggaattggatcaacatctccaggc
ttaacgttcagcctttcttttggaggctggggaacactgatcaatccgactgggatttct
atatgtcagagatctggctgtgtagtagtggcacatgatggcaagaaaaggattaagctc
tttggtttgagcggaagctgtatacagcagtttggggaacgaggcaacgcaggcaatgat
atcaaatacccacttgatgtaacagtcacactggatggtcatgtcgttgtcacagacagc
ggggatcagtctgtgaaagtgtttgactttgatggaagaggcaagctagttatccaaggg
cctttccacttaccatggggtttggataccacccctgaaaataaaattattctgactgat
gcaaacgcaggggccctttatcatttgacagctgattttaaaaaaggggaactaaaaaag
attcagaagacccagtcaaacctatgcaatccaagagaggtggcagtttctcagctgtct
ggggttattgctgtaattgagcaccttctggctagaggaccaaactacagcagtacaagg
gtgaagattttcaatgctgacatgacgcttattggccagatcgatagctttggtctcaac
ctattttttccttccaaaatatatgtcactgctgtgacctttgacagagagggacatatc
atagtagcagatgtctataaccagattgtattgtgcttagggaagcctgaggagtttccg
gtctttaagcccataattacccaagggcttgcttaccctgtagcattgacatacacagca
aacaattctctgattgtcttagacaatggtgaccattcagtaaaaatatataccgctagc
tga
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