Alligator mississippiensis (American alligator): 102568842
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Entry
102568842 CDS
T03087
Symbol
SLC6A1, SLC6A11
Name
(RefSeq) solute carrier family 6 member 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102568842 (SLC6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amj02000
]
102568842 (SLC6A1)
Transporters [BR:
amj02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102568842 (SLC6A1)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102568842
NCBI-ProteinID:
XP_006264513
UniProt:
A0A151N0R1
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Position
Un
AA seq
599 aa
AA seq
DB search
MATNGTKVADGQISTEVSDASITNDKPKTLVVKVQKKKSDIPDRDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTNLPWRHCENSWNTDRCFSNYTIA
NTTNMTSAVLEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVV
YFSATYPYVMLLILFFRGVTLPGAREGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASG
PGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRR
EIFIAVVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRF
YDNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGNYVFPTWGQGVGWLM
ALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDIIHPESEPEQAQQSNSANKEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatggaacaaaagttgcagatggacaaatctcaactgaagttagtgatgct
tcaatcaccaatgacaaacctaaaaccttggtggtgaaagtgcagaagaagaaatcagat
attccggacagagacacctggaaaggaagatttgactttcttatgtcctgtgttggttat
gccattggtttagggaatgtgtggcgatttccatacctttgtggcaagaatggtggaggg
gcattcctgattccatatttccttactttaatttttgctggagttccactgtttcttttg
gaatgttcccttggccagtacacatctataggcggcctcggagtttggaagcttgctcca
atgtttaaaggtgttggattagctgctgctgtcctgtccttttggctaaatatttactac
attgtgattatttcttgggccatatattacctatataattcatttaccacaaatctccct
tggaggcactgtgagaattcatggaacacagaccgctgtttctccaattatactatagca
aataccaccaacatgacaagtgcagtgcttgaattttgggaacgtaacatgcaccaaatg
actgatggtttggaaaaaccagggcagatccgatggccattagcaattacactggcaatt
gcctggattctggtgtacttttgcatctggaagggggtaggctggacaggaaaggtggtc
tacttctctgctacttatccatatgtcatgctgcttatcttgttcttccgtggagtaaca
ctgcctggagcaagggaaggcattttgttctatataactcctaacttcagtaaactttct
gattctgaggtatggctggatgctgccacacagatttttttctcctatggtttgggtctt
ggttcactgattgctcttggaagttacaaccctttccacaataatgtttacagggattcc
attatagtgtgctgcataaattcatgcacaagtatgtttgctggctttgtcatcttctcc
attgttgggttcatggctaatgtcaccaagaggcctattgcagatgtagcagcatcaggt
cccggactggcatttttagcttatccagaagcagtgacacagttaccgatctctcctttg
tgggcaattctgttcttctccatgttgctaatgcttggaatagacagccagttctgcact
gtggaaggattcataacagctttggtggatgaatttccaaagttattacgcaatcgaaga
gaaatattcattgccgttgtctgtattatttcctatctgataggactgtccaatattact
cagggtggaatttatgtgtttaagctttttgactattactctgccagtggaatgagtctc
ttgtttcttgtattctttgaatgcatctccatatcctggtgctatggtgttaacagattt
tatgacaatatccaagagatggtgggatacagaccttgcatctggtggaaactctgctgg
tcattctttactcctataattgtggcaggagtgtttatcttcagtgctgtccagatgact
cctcttactatggggaactatgttttcccaacatggggccaaggggttggctggcttatg
gctctttcttctatggtgctgattccaggctatatggcatacatgtttcttactttaaaa
ggctccttaaaacagcgtatccaagtaatgattcagccaagcgaagacataattcatcct
gaaagcgagccagaacaagcccagcaaagcaactccgccaacaaagaagcatatatttaa
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