Alligator mississippiensis (American alligator): 102568904
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Entry
102568904 CDS
T03087
Symbol
TAF1C
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102568904 (TAF1C)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102568904 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
102568904
NCBI-ProteinID:
XP_019350939
LinkDB
All DBs
Position
Un
AA seq
903 aa
AA seq
DB search
MGQLLQENFHLGEARLRGKACENVVPLSALLRELSHMDARRGCRQLWVSSRLRGFCHLSQ
AWLWELPLGMLGERLHEELALQWDQLLFDDAPTGGALAWLPTGGIGASRGCLLHPAGPAM
DQLCFQDVVLAPGEDGALRPCAQGSPAQFKLSGRVRQVSATQVDGAAFVGVRSDYHCGAW
RLQPGAVPTPLQVVRTTSPASCLTVSPHLPGELSLCTHSGAVYLWSVETGLQRLCQEPET
MFFRDASPWRWSEFTAHPRVLSYADRTGVQCLDVRAPTQARRDLFKVGAEAGCQRGERVV
LPLYLGQAHPAQHLIATQFSVYVVDERFPLVPALRWEHMMTVPPIFAHMMPGSPRGRSHK
VLLGAQRTQELMLLQCTGGSTSACQLVGAPRRLHTIADGLQYLPAMTPHQLDWLHQRLGM
PAAGVTATLGRCGPLESMLVFQLSEAGDLFYQTLLHSQPADSSPERGHADEPSTSPSLQT
PAQAVQHLPGPGTSCGSGTEGEEEDRMETYLSGLEVLVNEDSEDEDSGSAGQPTDPGAQG
QGRTSPNQTPAPSPAIAAQYRRWLATLSHAWKHLAEPAKPRVPLTLSQRRLFTRRELGQV
PGDRVLHQQARRQLRRAMRERGLVVGCALGSEPSPLPLPCPVEPQAWPDDLSERLTASWV
GGWSNWWEEQQGRSQARQARVRALREQRRRRKRARGLCSLSGSFSSSLTCQSDLSDFSDV
SAWSVGSRAPTPVPASPQHSLAPSLSGQDAPAEPWPGSPLACSTQLSQEPGGSQDPGTPS
QLLSSQMLRLRGVPRERRKTLRDYLSIFTESPVEPPPEVPSSQASRLGGDHRVPLSQSQA
SSLGGERHVPLSQSQASSLGGERHVPLSQSQASSLGGGQHVPLSQSQASTGSQAKRKRAR
MGF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggccagctactgcaggagaatttccatctgggggaggcacggctgcggggcaaggca
tgtgagaacgtggtcccgctgtcggccctgctgcgggagctcagccacatggacgccagg
cgcgggtgccgccagctgtgggtcagctcccggctgcgcggcttctgccacctgagccag
gcttggctgtgggagctgccgctagggatgctgggcgagcggctgcatgaggagctggcg
ctgcagtgggaccagctgctcttcgacgatgccccgactgggggtgcgctggcctggctg
cccactgggggcataggcgcgtcccgcggctgcttgctgcacccagccggccctgccatg
gatcagctctgcttccaggacgtggtgctggctccaggggaggacggcgccctgcgtccc
tgcgcccagggcagccctgcccagtttaaactcagcggccgggtgcgccaggtgtctgcc
acgcaggtggatggggcagcctttgtgggtgtccgctcggactaccactgtggggcctgg
aggctgcagcctggcgccgtgcccactccgctgcaggtcgtccgcaccacctcgccagcc
tcctgcctcactgtcagcccccacctgcccggggagctgtccctgtgcacccacagcggg
gctgtctacctgtggagcgtcgagaccgggctgcagcgcctctgccaggagccggagacc
atgttcttccgtgacgcatcgccgtggcgctggagcgagttcacagcccacccgcgggtg
ctgagctacgctgaccgcactggcgtgcagtgcctcgatgtgcgggcccccactcaggcc
cggcgagatctcttcaaggtgggcgcggaagccgggtgtcagcgtggagaacgcgtggtg
ctgcccctgtacctgggccaggcccaccctgcccagcatctcatcgccacgcagttctcg
gtgtatgtggtggacgagcgcttccccctggtgccagcgctgcgctgggagcacatgatg
acggtcccccccatctttgcacacatgatgccgggcagtccccggggcaggagccacaag
gtgctgctgggcgcccagcgcactcaggagctgatgctgctgcagtgcacaggcggcagc
acatcagcctgtcagcttgtgggggccccacggaggctgcacaccattgctgatggcttg
cagtacctgcctgccatgacaccccaccagctggactggctgcaccagaggctgggcatg
cccgctgcaggggtgaccgccaccctggggcgctgtgggccgttggagtccatgctggtt
ttccagctgtccgaggccggggacctcttctaccagacgctgctgcactcgcagccagca
gacagctcgccagagaggggccatgcagatgaaccctccacgtccccatccctgcagacc
cctgcccaggcagtgcagcacttgccaggaccaggcacttcctgtggttcgggcacggag
ggcgaggaggaggacaggatggagacctacctgtctggcttggaggtgcttgtgaacgag
gactcggaggatgaggacagtggcagtgccgggcagcccacagatcccggggcccagggg
caaggccgaaccagccccaaccagacccctgcccccagccctgccattgctgcccagtac
cgccgctggctggcaacactgtcccatgcctggaagcacctggcggagccggccaaaccg
cgggtgcccctcaccctgagccagaggcggctcttcacccgcagggagctgggccaggtg
cccggggacagggtgctgcaccagcaggctcgccggcagctgcgccgcgccatgcgggag
cgtggtctggttgtgggctgtgccctgggctcggagccctcaccgctgcctttgccctgc
cccgtggagccacaggcctggcctgatgacctgagcgagcggctcacggcctcctgggtg
gggggctggagcaactggtgggaggagcagcagggcaggagccaggcacggcaggcacgg
gtgcgggcgctgcgggagcagagacggcgccggaagcgagcgcggggcctctgcagcctg
tcgggcagtttcagctcctccctcacctgccagtctgacctgtccgacttcagtgatgtc
tcagcttggtccgtgggcagccgggcccccacgcctgtcccagccagcccccagcatagc
cttgcgccctccctgtcagggcaggatgctcctgcagagccctggccaggctccccgctg
gcctgcagcacccagctctcccaggaacctgggggcagccaggacccagggaccccctcc
cagctgctgtcatcccagatgctgcgcttgcgtggggtgcccagggagcgcaggaagacc
ctccgcgactacctctccatcttcactgagtcccccgtggagccgccacctgaggtgccc
agcagccaggcttccaggctggggggagatcaccgggtccccctctcccagagccaggcc
tccagcctgggtggggagcggcatgtccccctttcccagagccaggcctccagcctgggg
ggggagcggcatgtccccctctcccagagccaggcttccagcctggggggggggcagcac
gtccccctctcccagagccaggcttccacgggttcccaggccaagcgcaagcgtgcccgc
atgggcttctga
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integrated database retrieval system
