Alligator mississippiensis (American alligator): 102569033
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Entry
102569033 CDS
T03087
Symbol
RAD54B
Name
(RefSeq) RAD54 homolog B (S. cerevisiae)
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102569033 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102569033 (RAD54B)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102569033 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
102569033
NCBI-ProteinID:
XP_006274004
UniProt:
A0A151MYE4
LinkDB
All DBs
Position
Un
AA seq
916 aa
AA seq
DB search
MRRSAAPSQLLGNSAKKPRFIPPGNKNTICLEKEVEQLGPEIKGREKQQSGLGLTRALSG
THGLNISSTKAVEFVGEISSMEKANGENKHKAVEMKAVNRLNADPVHVEAPEVARRKEEQ
EEPDYFTKYFSVVWCKASKKKHKKWEGDAVLIAKGKSLVLKDMEGKDIGKGTGYKAKDLE
SLTEGQTLMIGGKQIEVMGVILVEDFKSGRCFQSGVTASTTVPPGSSQTTMKPFCTPIRN
ICKSSFKENLLKDSQSYKPRHDPNAPNSLVMPHPNPSHQQMFNKAGLPVIDVVVDPYIVN
HLRPHQKEGIVFLYECVMGMRVSDRFGAILADEMGLGKTLQCISLVWTLLRQGLYGCKPI
IKRVLIVTPGSLVKNWKYEFQKWLGSERIKVFPVDQDHKVEEFINSPLYSVLIISYEMLL
RSFDLIQTIEFNLLICDEGHRLKNSSIKTTTALVNLSCEKRIILTGTPIQNDLQEFYALI
DFVNPGILGPLSTFRKIYEEPIIWSREPSAIKEEKELGEKRAAELTRLTGLFILRRTQEI
INKFLPPKKETILFCRPTALQLELYRKLLSSRIVKSCLQGVLENSPHLICIGALKKLCNH
PCLLFKSIKEKECSGTFDEHEESNLYEGLVNVFPQDYTSTAFAEADSGKLQVLAKLLTAI
RELSPAERVVLVSNYTQTLNILQEMCKHYGYSYTRLDGQTPVSQRQQIVDSFNNKFSPAF
IFLLSSKAGGVGLNLFGASHLILYDIDWNPATDIQAMARVWRDGQKHTVHIYRLLTTGSI
EEKIYQRQISKQDISGAVVDLSKTSEHIHFSTEELRNLFILHEDSSCVTHDLLECNCMGK
KDHQNLSAAMFSTFRGCQLGKNHEKPTSKKPLSMSQLMQWKHFSGQHQTVDDPFLERIKE
NVTFIFQNVTNPVTSS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatcagcagctccaagtcaactgctaggaaactcggcaaaaaagccaaggttt
atacctccaggaaacaagaatacaatctgtctggagaaagaagtagaacaactgggccca
gaaattaagggtagagagaaacaacagagtggccttggacttacaagggctctttctgga
acacatggactaaatataagttctacaaaagctgtggaatttgttggagaaataagttca
atggaaaaagctaatggagaaaataagcataaggcagttgaaatgaaggcagtaaataga
ctcaatgcagacccagtgcatgttgaagcaccagaagttgcaaggcgcaaagaagagcag
gaggagcctgactactttaccaaatattttagtgttgtatggtgtaaagcttcaaagaaa
aaacacaagaagtgggaaggtgatgctgttcttattgcaaaagggaagtctctggtgctg
aaagacatggaaggaaaagacattggaaaaggtactggatataaagctaaagacctggaa
agtcttactgaaggacaaacactgatgattggaggaaaacaaattgaagtgatgggtgta
attttagtagaggactttaagagtggcagatgttttcaatctggtgtcacagcttctact
acagttccacctggttcttcacaaactactatgaagccattctgtacccccatcagaaac
atttgcaaatccagctttaaagaaaatttactcaaagattcccagagctacaaacctcgc
catgatccaaatgcaccaaattcgttagttatgccacatccaaacccaagtcaccaacag
atgttcaataaggctggtttacctgtgattgatgtagttgtggatccttacattgtaaat
catcttcgaccacaccagaaagaagggattgtatttctgtatgaatgtgtaatgggaatg
agagttagtgacaggtttggagccattcttgctgatgaaatgggtttaggaaaaacattg
cagtgtatttcgctagtctggactctcctgcgtcagggactttatggatgcaaacctata
ataaagcgtgtcttaattgtcactcctgggagtctggtaaagaactggaaatatgaattt
caaaagtggctgggaagtgaaaggataaaagtctttccagttgatcaggatcacaaagta
gaagagtttatcaattccccactttattctgttttgataatcagttatgagatgctgctg
cgctcttttgacctaattcagactatagaatttaacctcttaatctgtgatgaggggcat
cgtttgaaaaatagctccattaagactactacagctcttgtcaatctgtcctgtgagaag
agaattattcttacaggtactccaatacaaaatgacctgcaagaattttatgcattaata
gattttgtaaatcctggaatacttggtcctttgtccacatttagaaaaatatatgaggaa
cccattatctggtcccgagagccttcagcaataaaggaagaaaaggaattgggagagaaa
agagcagcagagctaactcgtctgactggactttttattctaagaagaacgcaagagatc
ataaacaaatttctccctccaaaaaaggagaccatactcttctgccgaccaacagccttg
cagcttgaactctatcgaaaactgcttagttctcgcattgttaaatcttgcttacaaggg
gtcttagaaaatagtcctcatttgatatgcatcggagctctgaaaaagctctgcaaccac
ccttgccttttgtttaaatccataaaggaaaaggaatgcagtggaacttttgatgaacat
gaggaatcaaatctttatgaaggcttggtaaatgttttcccacaagattatacctctacc
gcttttgctgaggctgattcaggaaaactgcaggtgctggcaaagttgttaacagcaatc
cgagaactcagccctgctgaaagagttgtgctggtgtctaattacacccagacactgaat
atattacaagagatgtgcaaacattatggatactcttataccagacttgatggacaaacg
cctgtctcccagagacaacagattgttgatagttttaataataaattctctccagcgttt
atctttttgctaagttcaaaggctggaggtgttggtctgaacctttttggtgcatctcat
ttaattctatatgatattgactggaatccagctactgatattcaggcaatggccagagtg
tggagagatggtcagaaacatactgtgcatatttacagactgctaactacaggctcaata
gaagagaagatttatcaaagacagatcagcaagcaagacatttctggggcagttgtagat
ctttccaagacatctgaacatattcatttttccactgaggagcttagaaacctctttata
ctacatgaagattccagctgtgttacccacgacttgcttgagtgcaactgtatggggaag
aaagaccatcaaaatctttctgcagcaatgttctctacgtttagaggttgccagcttgga
aaaaatcatgagaagcctacttcaaagaaacctctttccatgtcacagctgatgcaatgg
aaacacttctctgggcagcatcaaactgtagatgatcccttccttgaaaggataaaagag
aacgttacttttattttccagaatgtaaccaatccagttacatcctcctaa
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