Alligator mississippiensis (American alligator): 102569105
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Entry
102569105 CDS
T03087
Symbol
LRIT1
Name
(RefSeq) leucine rich repeat, Ig-like and transmembrane domains 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102569105 (LRIT1)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102569105 (LRIT1)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
fn3
Ig_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
102569105
NCBI-ProteinID:
XP_006270234
LinkDB
All DBs
Position
Un
AA seq
628 aa
AA seq
DB search
MWITVGLVCCLAFGGLPLAHCSCPSQCSCTFHSLNEGTKERTVLCNDPEMTITPVNIPGD
TIKLRIEKTALRRVPGEAFHSLHNLEFLWMPYNSLTSLSVITFKGLRQLQELRLDGNDLS
SFPWDSLADMPQLRLLDLHNNELTSVSAEATLYIKNITYLDLSSNKLMTLPQALISAWAN
LQAVPYFPNDNSKIIIGLQDNPWVCDCSLYEMVHFINFQSPNIAFIEPKLKCFTPRSLAG
IFFSQVELRKCQSPVVHTSVAKVKTILGSTVLLRCGTTGVPIPELSWRRADGNRLNGTVH
QEISSDGMSWSILGLPVVSYLDSGEYICKAKNFLGATEAFISLIITDSENTDDPNANSKG
VWNGKVSSMEAAAYNDKLMARYVITTSTSPTQSARSGTEENIGLQNIVSEQNNNRRNLLS
SPPTGQQEPERIVRSVRVIGDTDQSISLAWKAPLAKNTTEFSVLYAIFGERDMRRINVEP
GKMKITINGLLPKTKYIVCVCMKGLIPRKEQCTIFSTDEVASAGGTQKLINVVVISVACV
IAVPLTLVVCCGALKRRCKKCLLQKPKEIQDSYVTFESLSSGAKTKGTEGEYLTRHTPDE
SNRLLSARSSVDSEAIPKMEGQPNEYFC
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcactgtgggcttggtctgctgcttagcctttggagggctgcctttggctcac
tgctcttgcccttcccaatgtagctgcacctttcatagtctcaatgaaggaacaaaggaa
agaactgtgctgtgcaatgacccagaaatgacaatcacacccgtgaacatcccaggagat
acaatcaaacttcgaatagagaagactgccctcaggagagtgccaggggaggctttccat
tctctccataatctggaattcctctggatgccctataattctttgaccagcctcagtgtg
attacttttaagggtcttcgtcagttacaagagctaagactggatgggaatgatttaagt
tctttcccatgggactctcttgcagacatgccccagctaaggcttctggatttacataat
aatgaactcacctcagtatcagcagaagcaactctttacataaagaatattacctatctg
gatctgtctagcaataaactgatgactcttcctcaagctctcatttcagcctgggcaaac
ctccaagcagttccttacttccccaatgacaactccaagatcattataggcttgcaagac
aatccttgggtgtgtgattgcagtttgtatgaaatggtccatttcataaatttccagtct
cctaacatagcatttatagaaccaaaactgaagtgcttcaccccccggagtcttgctgga
attttcttcagtcaagttgaactaagaaaatgtcaaagtcctgttgtacatacatctgtt
gccaaagtaaagaccatattgggcagcactgtgcttctgcgatgtggtactactggagta
cccatccctgaactcagctggagaagagctgatggtaatcggcttaatggcacagtgcat
caggaaatttctagcgatggaatgagttggtctatcctgggcttacctgtagtctcttat
cttgattctggagagtacatttgtaaagcgaagaacttcctaggggcaacagaggccttt
atctccctcattatcactgattctgaaaacacagatgatcctaatgctaactctaaagga
gtctggaatggaaaggtaagcagtatggaagcagctgcttacaatgataaactgatggct
aggtatgttatcacaacctcaacttcacctacacagagtgccagatcaggtacagaagag
aatattgggctccagaatatagttagtgagcagaataacaaccgaagaaaccttttatca
agtccacccactggtcaacaggagccagaacgtatagtaaggtctgttagagtgataggg
gacacagatcaaagtatctcattggcttggaaagcccctctggccaagaacacaactgaa
ttcagtgttctttatgccatttttggagaaagagacatgcgtagaatcaatgtggagcca
ggtaagatgaagatcactattaatgggctgttgccaaagaccaaatacatagtgtgtgtc
tgcatgaaaggactgatccccaggaaagagcaatgcaccatattttccacagatgaagtt
gccagcgctggtggaacccaaaaactcattaatgtggttgttattagtgtggcctgcgtc
atagctgttcctctgactttagtggtttgctgtggggcactgaaaaggcgctgcaaaaaa
tgcttattgcagaaacccaaggaaatccaggactcctatgtcacatttgaaagcctctct
tcaggagcaaaaacaaaaggaacagaaggagaatacttgactagacataccccggatgaa
tctaacaggctgctatctgcacgatccagcgtggactcagaggcaataccaaagatggag
gggcaacccaatgagtacttttgttaa
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