Alligator mississippiensis (American alligator): 102569107
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Entry
102569107 CDS
T03087
Symbol
GAPVD1
Name
(RefSeq) GTPase activating protein and VPS9 domains 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102569107 (GAPVD1)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102569107 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
102569107
NCBI-ProteinID:
XP_014458491
LinkDB
All DBs
Position
Un
AA seq
1457 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQGVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDQNKLIERFSPAQQEKLFGEKGT
ERFRQKVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACLICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLGKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVIYVTYSQLTTLVGF
MRNVMLSDQLREDRMALENLLANLPQNKPGKSSSLEMTPYSTPQLSPATTPANKKNRLPI
ATRSRSRTNIQMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQL
ADGGQGDVPVDETKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAAAESMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPS
DSEATDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKI
EDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGPLAVVR
PKVHYARPSHPPPDPPILEGAMGGNEARLPNFGAHILIPTDLEAFKQRHSYPERLVRSRS
SDIVSSVRRPMSDPGWNRRPGNEERELPTNHSCGVAILAAPQSSSSSPSKDSSRGEIEER
KDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLMPDRFSALTDDPSPRLS
AQAQAAEDILDKYRNAIKRTSPSEGAIVNYDSTEAMGDGESMHDSPRDEALQNMSADDLP
DSASQVAQPQGSAFSYRDAKKKLRLALCSADSVAFPMLSHSTRNGLPDHTDPEDNEIVCF
LKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCR
QGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDK
TAQVEDFLQFLYGAMAQDTIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRD
QVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMC
STIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWW
MQFTAAVEFIKTIDDRK
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatattcacactttggcgcatcacctcaagcaggagcgactctacgta
aactcagaaaagcaacttatacagagactcaatgctgacgtattgaaaactgctgaaaaa
ctgtaccgcacagcatggatttccaagcagcagaggattaacttggacagacttatcata
acaagtgctgaagcctctcctgctgagtgctgccaacatgctaagatcttggaggacaca
caatttgtggatgggtacaagcagttgggatttcaagagactgcttacggagaattcctg
aacaggcttcgagaaaaccctaggcttattgcttcctgtctggttgctggagagaaactc
aaccaggacaacactcagggtgttatccacaccgtctttacctccatctatggcaactgc
atcatgcaggaggatgagagctatctcctccaggttttacggtacttgattgaatttgag
ctcaaggaaagtgacaacccccggcggctcctgagaagaggcacctgtgcattcagcatt
ttattcaaacttttttcagaagggctcttttctgcaaaactcttcctcactgcaacactg
catgagccgattatgcagctgctagttgaagatgaagatcacctagaaactgatcaaaac
aaactgattgagcggttctctccggcacagcaggaaaaactctttggggaaaaaggcaca
gagaggttcagacagaaagtccaagagatggtggattccaatgaggccaagctcgtaacc
ctggtgaacaaattcattggctatctcaagcagaacacgtattgctttccacatagtttg
agatggattgtgtcccaaatgtacaaaacactctcatgtgtagacaggctggaggttggg
gaggtgagagcaatgtgcacggatcttcttctagcctgcttaatttgtccagcagttgtc
aacccagagcagtatggaatcatttctgatgccccgataaatgaagtggcaagatttaac
ctgatgcaggttgggagacttctgcagcagttggcaatgacaggctccgaagagggagat
ccacgcatgaaaagcaaccttggtaaatttgacaaaagctgtgttgctgctttcctggat
gtcgtgattgacgggcgcgcagtggaaacccctcctatgtcctcagttaaccttctggaa
gggctgagccgtactgtgatttatgtgacatacagccaacttactactctggtgggtttt
atgaggaatgtgatgttgagtgatcagctgagggaagatcggatggctctggaaaacttg
ttggcaaacttaccccagaacaaaccagggaaaagcagcagccttgaaatgactccttac
agtaccccacaactgtctccggcaaccactccagccaacaaaaaaaacagactgcctata
gcgactcgaagcagaagcagaacaaacattcagatggaccagcacggagaccatgaggga
tcctcccaggagaccatcccagaagtccagccagaagaggtgctggtgatttctctgggg
acaggcccacagattactccgggtatgatgtcagaaaatgaggtcttaaacatgcagctt
gcagatggaggacaaggagatgtccctgttgatgaaaccaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgttccaattctgtgtcgtctttggatctggaaggagaatctgtctcggagcttggg
gcagggccgtctggaagcaatggcgttgaagcgctgcagctgctggaacacgaacaagcc
acgactcaagataatcttgatgacaagctccgtaagtttgaaattcgtgatatgatggga
ctgactgatgatagggatatatcagaaactgtgagcgagacctggagcacggacgtcttg
ggcagtgacttcgatccaaatattgatgaagaccgtttgcaagagattgcagccgcagag
agtatgctgggcagcttgctgtgtttgccaggttcgggatccgtgctgcttgatccctgc
acaggttcaaccatttcggaaaccaccagtgaggcctggagtgtggaagtgctgccaagt
gattcagaggccacagacctaaagcaggaagagagactacaggagctggaaagctgttct
gggctgggcagcacctccgatgacacggatgtgagggaggtcagttctcgtcccagtaca
ccaggcctcagcgtcgtgtcaggtattagtgccacgtcagaggatatccccaataagatt
gaggaccttcgatctgaatgtagctctgactttggtggaaaagattctgtgacaagtcct
gatatggatgaaacagctcatggagccagtcaattgacttctcccccttctcaaacggat
tctttgctggcactgtttgatcccctgtcatcaaacgaaggtccattggcagtggttagg
cctaaagtgcactatgcaaggccttctcacccaccaccagaccccccgatcctggaagga
gctatgggaggtaatgaggccaggctacccaactttggcgctcatatcttaattccaact
gacctggaggcgttcaagcagaggcattcctaccccgagaggctggtccgcagccggagc
tctgacatagtgtcttctgtgcggaggcctatgagcgatcctggctggaacagacggcct
ggtaatgaagagagggagcttcccaccaaccacagctgtggagtagctattttggctgcg
cctcagtcctcctcttcatcacccagcaaagactcctccagaggagagatagaagaacgg
aaagatagcgacgatgagaaatcggacaggaacaagccctggtggaggaaacgttttgtt
tcggcaatgcccaaggcacctattccgtttagaaaaaaagaaaagcaagaaaaagacaaa
gatgacttgatgccagacagattctctgctcttacagatgatcccagccccaggctaagt
gcacaggcgcaggcggcagaggatatcctggacaagtacaggaacgctatcaaacgaacc
agccccagcgaaggagccatagtcaattatgacagcacagaggccatgggggatggtgaa
agtatgcatgactcgccacgtgatgaagccctgcagaatatgtcagcagatgacctccct
gattctgcaagccaagtggcccagccccagggctctgctttctcctacagggatgcaaag
aagaaattgcgactggcgctctgttcagctgattctgttgcctttcctatgctgagccat
tcaacaagaaacggcctaccagaccacacggaccctgaggacaatgaaatcgtatgcttc
ttgaaagttcagctagctgaagccattaacctgcaagacaagaacttgatggcccaactg
caggagaccatgcggtgtgtaagccgctttgataaccggacctgtcggaagctgctggct
tccattgcagaggactacaggaaaagggctccgtacattgcctatttgactcgctgtcgc
caaggcctgcagaccacgcaggcacacctggagcggctgctgcagagggttctgcgtgat
aaggaagtggccaacagatacttcaccacagtctgtgtgaggctgttactggaaagcaaa
gagaagaagataagggagttcattcaagatttccagaagctgacagcagcagatgataaa
acagcccaagtggaagattttctccagtttttatatggggctatggcccaggataccatc
tggcaaaacgccagtgaggagcagctccaggacgcacagctagccattgagcgcagcgtg
atgaaccgcatcttcaaactcgccttctaccccaatcaggatggagacatcttgcgtgac
caggtccttcatgagcatatccaaaggctgtcgaaggtggtgacggcaaaccataaagcc
cttcagatacctgaggtttacctccgggaggcaccgtggccatctgcgcagtctgaaatc
cgcacaataagcgcttacaaaaccccgcgagacaaagtgcagtgtattctgaggatgtgc
tcaactatcatgaacctgctgagcctggccaatgaagattcggtgcctggggcggatgac
tttgttcctgtcctggtctttgttctcataaaagcaaatcccccgtgcttgttgtccact
gttcagtacattagtagtttttatgctaactgtttgtctggagaagaatcgtactggtgg
atgcagttcacagcagcggttgaattcattaagaccattgatgatcgcaagtga
DBGET
integrated database retrieval system
