Alligator mississippiensis (American alligator): 102569241
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Entry
102569241 CDS
T03087
Symbol
OPN1LW
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
amj04030
]
102569241 (OPN1LW)
G protein-coupled receptors [BR:
amj04030
]
Rhodopsin family
Vision
Opsin
102569241 (OPN1LW)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srh
MpPF26
7TM_GPCR_Sru
DUF7471
DUF3810
Motif
Other DBs
NCBI-GeneID:
102569241
NCBI-ProteinID:
XP_006269091
UniProt:
A0A151NDQ6
LinkDB
All DBs
Position
Un
AA seq
364 aa
AA seq
DB search
MAGWAGAVGARRYQEDEETTHGSIFVYTNSNNTRGPFEGPNYHIAPRWVYNLTSLWMLLV
VVASVATNGLVLVATAKFRKLRHPLNWILVNLAVADLGETVIASTISVINQLAGYFVLGH
PLCVIEGYTVSVCGITGLWSLAVISWERWFVVCKPFGNVKFDGRLALGGIVFSWLWAAFW
TAPPLFGWSRYWPHGLKTSCGPDVFSGNTDPNVQSYMMVLMATCCILPLIIIIFCYLQVW
LAIRAVAAQQKESETTQKAEREVSRMVLVMIVAFCVCWGPYASFACFAAAHPGYAFHPLV
ASLPAYFAKSATIYNPIIYVFMNRQFRNCILQLFGRKVDDGSETSTAASRTDVSSVSSAS
VAPA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtgggcaggagctgtgggggcccggcggtaccaggaggatgaggaaaccacc
catggcagcatctttgtctacaccaacagcaacaacacgcggggcccatttgagggcccc
aactaccacattgcgccacgctgggtatacaacctcacctcgttgtggatgctgctggtg
gtcgtggcctcagtggctaccaatgggcttgtgctggtggccacggccaagttccgcaaa
ctacggcacccactcaactggatcctggtgaacttggctgtggctgacctgggcgaaaca
gtgattgccagcaccatcagcgtcatcaaccagctggctggctacttcgtgctgggccac
ccgctctgtgttattgagggctataccgtctccgtctgcggcatcacagggctgtggtcg
ctggctgtgatctcctgggagcgctggtttgtggtctgcaagccctttggcaacgtcaag
ttcgacgggcgcctggcactgggtggcattgtcttctcctggctctgggcagccttctgg
actgcaccccctctcttcggctggagcagatattggccacacgggctaaagacatcatgt
gggccagacgtcttcagtggcaacacggaccccaatgtccagtcctacatgatggtgctt
atggccacctgctgtatcctgcccctcatcatcatcatcttctgctacctgcaagtctgg
ctggccatccgtgcggtggcagcgcagcagaaggagtcagagacaacacagaaagcagag
cgcgaggtgtcgcgcatggtgctggtgatgatcgtggccttctgtgtctgctgggggccc
tatgcgtcctttgcctgctttgcagctgcccaccctggctatgccttccacccccttgtg
gcctcgctgcctgcctacttcgctaagagcgccaccatctataaccccatcatctatgtc
ttcatgaaccgccagttccgaaactgcatcctgcagctgttcgggcgcaaggtggatgat
ggatccgagacctccacggctgcatctcgcactgatgtctcctccgtctccagcgcctct
gttgcccctgcctga
DBGET
integrated database retrieval system
