Alligator mississippiensis (American alligator): 102569245
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Entry
102569245 CDS
T03087
Symbol
DENND4A
Name
(RefSeq) DENN domain containing 4A
KO
K20163
DENN domain-containing protein 4
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102569245 (DENND4A)
Membrane trafficking [BR:
amj04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102569245 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
102569245
NCBI-ProteinID:
XP_019333013
LinkDB
All DBs
Position
Un
AA seq
1880 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDTSKPLEEEIHFNDACHKIAKPKEPITDVTVIIKSLGEEVPE
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
ATPYGRPANISGGASSQRVYITYRRASENMIQNMLAVTDICIIIPSKGETPPHTFCRVDK
NLNSSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPPNSKYPLPVFSTFVLTGASAAKVYGAAIQFYEAYPEENLTEKQKSQLGLMTTGDGK
LDSSKTLQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKTVAWKILPKKPCKNLMNTLNNLYQQLAELQQRPREDALM
ELAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPIMQAPSETATDASSLFE
LQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVAKVDMDKTGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFDRFEGFLTTPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKRYSSIPQMWSKCLLRHCYGLWFICLPAYV
KVCHSKVRALRTAYDVLRKMHAKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAG
VDPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKRALKKLPANIPHAAL
SGGVSDLGSNSSSKEEVRQGKPSVEDNQEQKEDKKESDSSSLSEAESAKGSGDCLPKLNY
QNSSSAKPASSIVRLNGPIDKSDSTPGEMGAETSAGLLFTSSFEDANGAEIIHSKTLRKR
HKSAVESDLKQMAWASRNRNLSGDALMGLMINRINQEASPGEIVEKLGVDAKILSNVFQK
SIRPNTLNIRKSSLGSERESLEKESSDEDAPFDGSFVDKMESPVIFDLEDLDAEPEPKTV
KSSIEKLKRLQRNSSLPVKPIEKTDVETGFDPLSLLVAETEQQKEEDEEDDDRSVSTPSA
RRDLAEEIVMYMNNMSSPLTSRTPSIDLQKTYEDKTTSKKSPTAAQPCRRSSLPQNSPRP
SLAKSRSYHPKHEARARDRLWSSPAYSPNSPAREQSQDMAGTLALVSSPSFNLDTLLTPT
FDVLKSSMFSAGKGVAEKASKWYSKFAMYAASSKDQNSDRASISSLGALDSESTSLTDED
ICNDLEGASPPQENNVTSEIKGMGLSRTSLESSVSHDGSSKQFDQSGSLSKFPLPDKSEL
VSSCSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNL
FLPFLSIEIRDLRRPGRYFLKSSPSIENMQLLPPFSNQTRRACNSSATAGPAISVMSIQD
DDNTNCKSEEQDNTCARSIQIPSGRRQNPTGPECPSHPVARSISTYGPLEEDEKKNRKLS
HLIPTGSLPATLQGTDPLALEWHLPSPDPITVPYLSPLVVWKELESLLENEGDRAITVPD
FVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWD
NMKLHQDPRQPLYILWNAQTQKYPVVHLLQKDDDSFNQELLRSMVKSIKMNDVYGPMSQI
LDRLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTANQVKNTHNC
DRPPSTGVMECRKIFGEPYL
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggagctcgtgttgctgactactttgttgtagcaggactgacagatact
tcaaaaccactggaagaagaaattcacttcaatgatgcttgccataaaattgctaaacca
aaagaacctatcactgatgtgaccgtaattattaaatctctgggggaggaagtgcctgag
ggatacaaatgcatcgatgttacaccatctggactatcggcagatctcaataatgggagt
cttgtggggccacagatatacctttgttaccggagaggaagggacaagcctccgcttact
gatcttggggtattatatgatgggaaagagagagtaaaacagggctgtgaaatcattcaa
gccactccatacggtcgtcctgctaacattagtggcggtgcttcgtcgcaaagagtgtat
attacctatcgaagagcatcagaaaacatgatccagaatatgttggctgtcacagatata
tgcataattataccaagtaaaggagaaacccctccacatacattttgcagagttgataag
aatctcaatagcagtatgtggggctcagcagtatacttatgttataaaaagtctgtggca
aaaactaataccatatcatataaagctggtttaatatgccggtatcctgaagaagactat
gagtccttcccattaccagaatctgtgcctctcttttgcttacccatgggtgcaacgatt
gaatgctggcctcctaatagcaaatacccacttcccgtattttctacgtttgtattaact
ggagcttcagcagcaaaggtatatggtgctgctattcagttctatgaagcatatcctgag
gagaatctcacagaaaaacagaaatctcagttggggttaatgacgactggagatgggaag
ctggatagctccaaaacacttcagactaacaagtgtatatgtcttctttctcattggcct
ttttttgatgctttcaagaagtttctgacattcctatatcgttattccatctctggccca
catgtcttgcctattgagaaacacatttcccattttatgcacaaagttccttttccatcc
cctcagagacccagaattttagttcagctatcaccccacgataacctgattcttagtcag
cctgtatcatcgcctctaccactaagtggtggcaagttttctacgctgcttcagaaccta
ggacccgagaatgcagtgacgctgctcgtatttgctgtaacggaacataaaattctcatc
cattccttacgcccttcagtccttactagtgtgacagaggcattagtctccatgatattt
cctttccactggccatgtccgtacataccactttgccccttggcattggcagatgtgtta
agcgcaccatgtccgttcatagtcggaattgattcaagatactttgacctctatgaccct
ccaccagatgttagctgtgtggacttagataccaacaccatttctcaaactggagataaa
aaaactgttgcctggaagatcttaccaaagaaaccctgcaaaaatctgatgaacacttta
aataacttgtatcaacagctggcagaattgcagcaaagaccaagagaagatgcattaatg
gagttagcaatgaatgactatgattttaattccggcaagaagttgcatttgttagattta
gaaatccaggaggcatttctgtgtttcatggcctcaatattgaaaggttataggtcatac
ctaaggccaataatgcaagcaccttctgagaccgccacagacgcaagttccctctttgaa
ctgcaaggattcttaaaaagtcgagatcggtcacatcaaaagttctatacgttgatgacc
aaaacccagatgttcattcgcttcattgaagagtgttcttttgtcagcgataaggatgca
agtctcgcattttttgatgattgcgtagctaaagtagacatggacaagactggtgaaaca
cgcctgatagagctggatgagtcttacaagagtgaacacacagtgtttataacgccaccc
gagatccctcacctacccaatggggaagaacaccctttgcagtacagctataatggattc
cctgtgctgaaactagatttatttgaccgatttgaagggttcctgactacaccaaataac
aaactgtcctcaaaagccagtagtcccaatagcccatcaccaatgttcaggagaacaaaa
caggaaataaagtcagctcataagatcgctaagaggtactcctccatccctcaaatgtgg
tccaagtgtctgctgcgtcattgctatggcctgtggtttatctgccttccggcatatgtg
aaggtgtgccattcaaaagtcagggctctgaggaccgcgtatgatgtgctacgaaaaatg
catgccaaaaagatagacccacctgatgaggtgtgttaccgggtgctcatgcagctttgt
ggacagtatggccagccagtgcttgcagtgcgagtcctttttgaaatgaaaaaagctgga
gttgaccctaatgctattacctacggttactataataaggctgttttggaaagcacttgg
ccttcgagcaatagaggtggctattttctatggatgaagatacgaaacgttgtattaggc
attgcacaatttaaaagagctctgaaaaagctacctgcaaacataccacatgctgctctc
tctgggggagtttcagatcttggaagtaactcatcatctaaagaagaagttaggcaaggg
aaaccctctgttgaagataaccaagaacaaaaagaggacaagaaagagagtgattccagc
tctttatctgaggcagagagtgcaaaaggaagcggcgactgccttcctaagctcaattat
caaaattccagtagtgcaaaaccggcttccagcatagtccggctcaacggtcccattgac
aagtctgacagtacaccaggagaaatgggcgctgaaacctcagcagggttgttgttcacg
tcctcttttgaagatgccaacggagcagaaattatccacagtaaaaccttaagaaagaga
cataaaagtgcagtggaatctgacctaaaacagatggcatgggcaagcaggaaccgcaat
ctgagtggagatgccctcatggggctcatgatcaacaggattaatcaggaagcaagccct
ggagagattgttgaaaaattaggagttgatgcaaaaatcctatccaatgtgttccagaaa
agcataaggccaaatacccttaacatcaggaagtcgtcactaggctccgagagggagagt
ctggagaaggaatccagtgatgaggatgcaccttttgacggcagtttcgtagacaaaatg
gagtctcccgttatctttgatctagaagacttggatgctgaacctgagcctaaaacagta
aaatcttctattgagaaactaaagaggcttcaacggaacagtagccttccagttaaacca
attgaaaaaacagacgttgaaactggatttgatcccctatccctgctggtggctgagaca
gagcagcagaaagaggaggatgaggaagacgatgacagaagtgtttcaaccccatctgcg
aggcgagatttagctgaagaaatagtaatgtacatgaataacatgagcagccccttgacg
agccgcacaccgagcattgacttgcaaaagacttatgaggacaaaactactagtaagaag
agtcccacggcagcccagccttgcagaagatccagccttccccagaactcccccaggcca
agtcttgccaaatctaggagttatcatcctaaacatgaagcacgggcaagggacaggctc
tggtcgtctccagcttattctccaaacagtccagcaagggaacagtctcaggatatggct
ggcactttagctctagtatcgtcaccctccttcaacttagatacgctcttaacccccaca
tttgatgttctaaaaagcagcatgttttctgctgggaagggggttgcggagaaggctagc
aagtggtattccaagtttgctatgtatgctgcatcctccaaggatcaaaattcagaccga
gcaagtatttcatctcttggagccctggattcagagtctacctctctaactgatgaagac
atctgcaatgacttagaaggtgcttctcctcctcaagagaataatgtcacctcagaaatt
aagggaatgggtctcagtagaacgagcctagaaagctcagtttcccatgatggctcatcc
aagcagtttgatcagtctggttccctgtcgaagttccccttgcctgacaaatcagagctg
gtatcttcctgcagcacaagcagcaccagcgtgttccagaactatgctatggaggtcctc
atctcaagctgttcgcgctgtcgaacctgtgactgtctggttcatgatgaagaaatcatg
gcaggttggacagctgatgactcgaatctcaataccacatgtcccttctgtggtaatctg
ttcctgcccttcttgagcatagaaatcagagatctccgacgacctggacgatactttctg
aagtccagtccatctatagagaatatgcaactcctaccaccattttcaaatcaaacgaga
agggcctgtaactcttctgccactgctggtcctgctatatctgtgatgtccattcaagat
gatgataacacaaattgcaaatctgaagagcaagacaatacctgtgctagaagcatccag
atcccttcaggaagaaggcaaaatcccacaggaccagaatgtccaagccaccctgtagca
cgaagtatcagcacttacggtccactggaagaagatgagaagaagaaccggaaactcagt
catcttattcccactggcagcctacctgccactttgcaaggaacagatcccctggcgcta
gaatggcacttacccagtccagaccctataaccgttccttacctgagtcctttagtagta
tggaaggagcttgaaagcttacttgaaaatgaaggagaccgtgcgataacagtgccagat
tttgtagaccatcatcctatcgtgttttggaatctggtgtggtacttcaggcggctggac
cttcctagtaatttaccaggattaattctttcttctgaacactgtaataaaaactcaaag
attccacggaattgcatgtcggaggacagtaagtatgttctcattcagatgctgtgggac
aacatgaagctgcaccaggacccgaggcagcccctgtatattctgtggaacgcccagacc
cagaagtatccagtagtccatttactgcagaaagatgacgactccttcaatcaggagctc
ttgagaagcatggtgaaaagtatcaagatgaatgatgtctatgggcctatgagtcaaatc
ctggatagactgaacaaatggccacacattaaaaggcagaggagcctgtatagagaaata
ctatttctttcccttgttgctctaggaagagataacattgatatagatgcttttgataga
gaatataaaatggcctacgatcgtctcacagcaaatcaggtcaaaaatactcataactgt
gacagaccaccaagcactggagtgatggagtgccggaagatttttggagaaccatacctt
taa
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