Alligator mississippiensis (American alligator): 102569438
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Entry
102569438 CDS
T03087
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102569438
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
102569438
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102569438
Nuclear receptors [BR:
amj03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102569438
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102569438
NCBI-ProteinID:
XP_006259091
UniProt:
A0A151NGX4
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All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQNGIAKDDSEGLTRV
YTTSVSSGLSDLDDISTLSDGLLFDFPLTPEGGSTYYNLDLLTSAQPSPDQSSMDISDAK
LIKQEPIYELMLEPSLFTHSTLEGSQLTSDISVIETDRIAQTVVKSHLETCQYTTEELKK
LAWTLYTQDEIRNLQNKSCEAMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLK
AGCLEVLLIRMIRAFNPLNNTVLFEGKHGGVQMFKSLGCDDLINAIFELGRNLCRLQLSE
EEIALFTAAVLFSPDRPWLTESKKVQKLQDKIYLALQHEIRKKHSSEDKLSKMVSKLPLM
KTICNLHLDKLEFFRLLHPETALNFPPLYKEVFNSELQYSDPRES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagtgatcccatgtaagatctgtggagacaagtcttcagggatt
cactatggagtcattacatgtgaaggctgcaagggcttcttcaggagaagccaacagaat
aacgccagctactcctgctcacgccagaggaactgcctgattgaccggaccaaccgaaac
cggtgccagcactgccgcctgcagaagtgcctggccctgggcatgtcgcgtgatgcggtg
aaatttgggcgcatgtccaagaagcagcgggacagcctgtatgctgaggtacagaagcac
cagcagagtcaggagcagaatggcatcgccaaggacgactcggaaggcctgacccgcgtc
tacacaaccagcgtgagcagcgggctctctgacctggatgacatctccaccctgtcggac
gggctcctctttgacttcccactcacccccgaagggggcagcacctactacaaccttgac
ctcctgacctccgctcagccctcgccggaccagtccagcatggacatcagtgatgccaag
ctcatcaagcaggagcccatctacgagctgatgcttgaaccaagcctcttcacacacagc
accttggaaggcagccagctcacctcggatatttcagtgattgagactgaccgaattgca
cagaccgtggtcaaatcccacctggagacctgccagtacacgaccgaggagctcaagaaa
ctagcatggacattgtacacccaagatgagatccggaacctgcagaacaagagctgtgag
gccatgtggcagcagtgctccctgcagatctccaatgccatccagtacgtggtggagttt
gccaagcgcatcgacggcttcatggagctctgccagaatgaccagatcatcctcctgaaa
gcaggttgcctggaagtgcttctcatccgaatgatacgggcattcaaccccttgaacaac
acggtgctctttgaggggaagcacggcggagtgcagatgttcaaatcacttggctgtgat
gacctcatcaatgccatctttgagcttggaaggaacctgtgccggctacagctgtcagag
gaagagattgccctatttactgctgctgtcctgttctctccagatcgcccgtggcttacg
gagtccaagaaggtgcagaagctccaagacaagatctacttagctctgcagcatgagatc
cggaagaagcactccagcgaggataagctttccaagatggtttccaaactgcccttgatg
aaaaccatttgtaacctgcacttggacaagttggaatttttccggctcctgcatccggag
actgctctgaatttcccccctctgtacaaggaggtcttcaactcagagctccaatacagt
gacccacgagagagctaa
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