Alligator mississippiensis (American alligator): 102569537
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Entry
102569537 CDS
T03087
Symbol
ZC3H12D
Name
(RefSeq) zinc finger CCCH-type containing 12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102569537 (ZC3H12D)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102569537 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
102569537
NCBI-ProteinID:
XP_006262111
LinkDB
All DBs
Position
Un
AA seq
626 aa
AA seq
DB search
MSLSGKPVTARHRRGPAAEMDVQQGKLEFFCKLGYVKQDIFKVLENLGQEALEDDVLKEL
IRMGSRPQAHGSQAQHPLPKLVARGSCSTLAVPKRPEEDTADSSSNLRPIVIDGSNVAMS
HGNKEVFSCWGIQLAVDWFRERGHKYIKVFVPTWRKEPPRFDSPITDQHILEELEKQSIL
VYTPSRKVKGKRVVCYDDRYIVKVAYAKDGVIVSNDNYRDLQNENPEWKWFIEQRLLMYS
FVSDKFMPPDDPLGRHGPTLTNFLSKKPALPEPKWQPCPYGKKCTYGSKCKFYHPERQYH
AQLSVADELRAKTKASLLSVGAEEELKTTPPTGRGETASHDTCPKRQQESSGVRGNSSVQ
SFTVDPHCVEWTQRSYMEDSVRAWADRSQSKLEPEQRSFLQDPLRDQRLIEKQLSMLSLG
DQIYSESGPAGTLQAEDGVDGPHQCWDLRHSSYFTPHCHSVECTCLQGCHFHPSSHLGRY
PAHGGAQPCCNMQMQAVQNQRILYGPDSSQARRGLYSSMAPLSDPFPYSKHEDARYQKYL
LSQPPVQPFLLESGKRSGSFPRVDGCPHGEFRQSRAPGPLAGERARIHTALCSMFPYNDV
DRVMSLYPDLEDVSSLILLIQRHRNL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtctggcaaaccagtaacagcacgccacaggagaggtcctgctgcagagatg
gacgtacagcagggcaagctggagtttttctgtaagctgggctatgtcaagcaggacatc
ttcaaagtgctggagaatctgggccaagaggccctagaagatgatgtgctgaaagaactg
atccggatggggagcagacctcaggcccatggcagtcaggctcagcacccactcccaaaa
cttgttgcccgtggatcatgtagcactctggcagtgcccaaacggcctgaagaggacaca
gctgactcttccagtaacttgagacccattgtgattgatggcagcaatgttgctatgagt
catgggaacaaagaagtgttctcatgctggggaattcagctggcggtggactggttcaga
gaaagaggtcataaatacatcaaggtttttgtcccaacctggcgaaaggaaccaccgcga
tttgatagccctattacagatcagcacattctcgaagagcttgaaaagcaatcaatcctt
gtgtacaccccatcccgcaaagtgaaagggaagagagtggtctgctatgatgatcgctac
atagttaaagtggcctatgccaaagatggggttattgtttccaatgacaactatcgggat
ctccagaatgagaatcctgagtggaagtggttcattgagcagcgactcctcatgtactcc
ttcgtcagtgacaaatttatgcctcctgatgaccccttaggccgccatggacccactctc
actaatttcctcagcaaaaagcctgcccttcctgaaccaaaatggcagccctgtccgtat
gggaaaaaatgcacatatggcagcaagtgcaaattttaccacccagaaaggcagtatcat
gctcagctgtctgttgctgatgagctccgagccaaaacaaaggcttccttgttaagcgtg
ggggcagaggaagagttgaagaccacccctcctacaggcagaggcgagactgcatcccat
gacacttgccccaagaggcagcaggaatccagtggcgtgaggggcaacagctctgtgcag
agctttacagtcgatccccactgtgtggagtggacccaaaggagctacatggaggattca
gtgagggcctgggcagacaggtctcaaagcaagctggaacctgaacaaaggtcatttctg
caagacccattgagagatcaaaggctcatagaaaagcagctctccatgttatcacttggt
gaccaaatatacagtgaaagtgggccagcaggcacgttgcaagctgaggacggggtggac
ggtccccatcagtgctgggatcttagacacagttcatacttcactccccactgccacagt
gtggaatgcacgtgcttacaggggtgtcatttccacccaagttctcatctgggtaggtac
ccagctcatggcggggctcagccctgctgcaatatgcagatgcaagcagtccagaatcag
cgaatcctttatggccctgacagctctcaagccagacgaggcctgtattcttccatggcc
cccctgagcgacccctttccatacagcaagcatgaagatgcacggtaccaaaagtattta
ttgagccagcctccagttcagccatttctgttagagtctggtaagcggtctggctccttt
cccagggtggatggttgtccacatggtgaattccggcagagccgtgctccgggccctctg
gctggtgagcgggcacgcatccatacagcgctgtgctccatgttcccttataacgatgtg
gatcgagttatgtccttgtaccctgatcttgaggacgtgtctagcttaatattattaatt
caaagacacaggaatttatga
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