Alligator mississippiensis (American alligator): 102569550
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Entry
102569550 CDS
T03087
Symbol
ABCA2
Name
(RefSeq) ATP binding cassette subfamily A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj02010
ABC transporters
amj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102569550 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102569550 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amj02000
]
102569550 (ABCA2)
Transporters [BR:
amj02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102569550 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
102569550
NCBI-ProteinID:
XP_019331312
LinkDB
All DBs
Position
Un
AA seq
2513 aa
AA seq
DB search
MCLSLVCTLYLYWSLSLQHQAVQWVLAFEIFIPLVLFFILLGLRQKKPTIPVKEVSFYTA
APLTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQLLERLNEVVEESNLFDPDHPGLEE
ELESLHRRLESLSSSEPSSMETHFSSQAASGFTLGSAAKDRNELHHFLTQNLSLPNETAE
LLMGSNINLKEVYRLFFGSSPSSAEDVHEKEPWDRFSAGEKILQLEESLLGGWRNLKEGL
IHRALRNHTRSIHRQALLHLLSQALGLVGSPSEASDSYSPQAFVKEMENILFTPSVLEQL
TCDQNQGELRRILTVRDSQRPWLRGYRGLVCNGSAGIRRERFAQLATELKEQLDTHKIAS
RLKLDEVNSTAAQHRLHALLEDLMEIEKVLKDVDILSALAKLLPKGACTSKTPPPIANST
SWGGNSTAGTNSTVEEGEGEPVGENPQGQCSAFVQLWAGLQPILCGNNRTIEPEALKQGN
MSSLGFTSKEQRNLGLLVHLMTSNPKILYAPVGTEVDKVILKANETFAFVGNVTHYAKVW
LNISSEIRGFLEEGKLQRRIRWLQQFTADLHKHPEILNVSDNDLLRSFIDGNFSLPNASA
LLQQLDTIDNAACGWMRFMSKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFASVIFQTN
KDGSLPPHVMYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMERALIN
TFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEH
RLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDVFIIWLFLAIY
AVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASL
MSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLSMMMLIIDTVVYGVLTWY
IEAVHPGMYGLPRPWYFPFQKSYWLGNGRIETWECTWPWSRTTRLSIMEEDQACAMENRR
LEETRGIEEEPNHLPLVVCVDKLTKVYKTDKKLALNKLSLNLYENQVVSFLGHNGAGKTT
TMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDKLTVEEHLWFYSQLK
SMAEEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAG
VDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTY
GDGYKLTVVKRQSDARNNTDVYTNAGQTHSPPSHSSVSPCSEPRVSQFIKKYVASCLLIS
DTNTELSYILPSEAVKKGCFERLFQHLEQSLDDLDLTSFGLMDTTLEEVFLKVSEEDQSL
ENSDIDVKESKKDALQPPAPPMGPKPEANGEPLPEVEAPEKPDVELSNLVACSELAQSQA
SLRSASSVGSVRGDEGGAYSEFYGDYSPLFDNLQDPDNISLQDQEVNAEAEDQALAGQGS
FKLEGSWLKLRQFHGLIVKRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGDLPP
LILSPSQYHNYTQPKGNFIPYANEERREYRIKLSPDASPQLLVNTFHLPSGVGATCVLKT
AFNSTLDQLVQTLNLNSNESKMLAAKYFDAMCVDSFTQGLPLSNFVPPPPSPAPSDYPVS
MDEDLLHAWNSTTYPSTVKETITSAPSLPRIIHEPIKCTCSMQGTGFSCPSGVGGHPPQM
KVVTGDILADITGRNVSEYLLYTSDRFRLHRYGALTFGNVQKSIPASFGVKAPPTVRKIA
VRRTAQVFYNNKGYHSMPTYLNALNNAILRANLPKSRGNPAAYGITVTNHPMNKTSASLS
LDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKATKAKHLQFVSGCDPVIYWLANYVW
DMLNYLVPATCCIIILFVFDLPAYTSSTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSS
AYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAY
NEYINEYYAKIGQFDKIKSPFEWDIVTRGLVAMTIEGFVGFFITIMCQYNFLRKPQRLPV
STKPIEDDIDVANERHRVLRGDADNDMLKIENLTKVYKSRKIGRILAVDRLCVGVRPGEC
FGLLGVNGAGKTTTFKMLTGDESTTGGEAFINGHSILKELLQVQQSLGYCPQFDALFDEL
TAQEHLELYTRLRGIPWKDEERVVKWALKKLELDKYADKPASTYSGGNKRKLSTAIALIG
YPSFIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLAIMVNGR
LKCLGSIQHLKNRFGDGYMITVRTKSSLNVKEVVRFFNRNFPEAILKERHHTKVQYQLKS
EQISLAQVFSKMEQVVDVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQETSPNCSIQSP
LERVLSLLRPRAAPTELRALVVEEPEDLETDDEGLISFEEERAQLSFNTDTLC
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctgtcgttggtttgcactctctatttatattggtctttgtctcttcagcaccaa
gcagtgcagtgggtgctggcgttcgagatctttatacctttggtgcttttcttcatcctc
ctggggctgcggcagaagaagcccaccatccctgtgaaggaagtctctttctacacagca
gcccctctcacctctgctgggatcctgcccgtgatgcagtccttgtgtcctgatgggcag
agagatgagttcggattcctccagtactccaattccacggtgacccagctcctggagagg
ctcaatgaggtggtggaggagagcaacctgtttgacccagaccacccagggctggaggag
gagctggagtccttgcaccgtcgcctagagtctctcagcagcagtgagcccagttccatg
gagacccacttcagcagtcaggcagcatctggcttcaccttgggctctgcagcaaaggac
aggaatgaacttcaccacttcctcacccagaatctctccctgcccaatgagacagccgag
ctgctgatgggctccaacatcaacctcaaagaggtgtatcgcttgttttttggctcttct
ccctcctcggcagaggatgtccatgagaaggagccgtgggaccgcttcagtgctggggag
aagatcctccagctggaggagagcctcctgggtggctggaggaacctgaaggaggggctg
attcacagggctctgaggaaccacacgcgatctatccacaggcaggccctgctgcacctc
ctgtcccaggccctgggccttgttggttccccctctgaggcctctgactcctacagcccc
caggcctttgtgaaggagatggagaacatccttttcacgccgtcagtgctggagcagctg
acctgtgatcagaaccagggggagctgaggcggatcctgaccgtccgtgatagccagcga
ccctggctgcggggctaccggggcttggtctgcaatgggagtgctggcattcgcagggag
cgcttcgcccagctggccacggagctcaaggagcagctggacacgcacaaaattgccagt
aggctgaagctggatgaggtgaacagcacggctgcccaacaccggctccatgccctactg
gaggatctcatggagatagagaaggttctcaaggatgtggacatcctctcggctctggcc
aagttgctgcctaagggtgcctgcaccagcaaaactcccccacctatagccaacagcacc
agctggggtgggaactccacggccggcaccaactccaccgtggaggagggtgagggcgag
ccagttggggagaacccccagggccagtgctcggctttcgtgcagctctgggcaggactg
cagcccatcctgtgtgggaacaaccggacaattgagcctgaggcactgaagcagggcaac
atgagctctctgggctttaccagcaaggagcagcgcaacctggggctcctggtacacctc
atgactagcaaccccaagatcctctatgctccagttgggacagaggtggacaaggtcatc
ctgaaggccaacgagacctttgccttcgttgggaatgtcacacactatgcgaaggtctgg
ctaaacatctcctcagagatccggggcttcctagaggagggaaaactgcagagacggatc
cgctggctacagcagttcactgctgacctgcacaaacaccccgagatcctgaatgtctca
gacaatgaccttctccgcagcttcattgatggcaacttctcattgcccaatgctagtgcc
ctgctgcagcagctggacaccatcgacaatgctgcctgtggctggatgcgtttcatgtca
aaggtcagtgtggacatcttcaagggcttccccgatgaggagagcatagtgaactacacg
ctgaaccaggcatatcaggacaacgtcactgtctttgccagcgtcatcttccagaccaac
aaggatggcagcctcccaccacatgtgatgtacaagatccggcagaactccagcttcaca
gagaagaccaacgagatccgccgggcatattggcggcccggccccaacaccggcgggcgc
ttctacttcctctatggctttgtgtggatccaggacatgatggagcgggcccttatcaac
acctttgtgggccatgacgtggtggagcctggcaattatgtgcagatgtttccctaccca
tgctacaccagggatgatttcctgtttgtcatcgagcacatgatgcccttgtgcatggtg
atctcctgggtctattcggtggctatgatgatccagcacattgtggcagagaaggagcat
cgcctgaaggaggtgatgaagatgatgggcttaaacaatgcagtgcactgggtggcctgg
tttatcaccggcttcgtccagctgtctatctctgtcacagcactcaccgccattctcaag
tatggcaaagtcctgatgcacagtgatgtcttcatcatctggctcttcctggccatctat
gctgtggctaccatcatgttctgcttcctggtatctgtactgtactccaaggccaagcta
gcatctgcctgcgggggcatcatctacttcttgagctacgtcccctacatgtacgttgcc
atccgggaggaagtggctcatgacaagatcacggcctttgagaagtgcattgcatccctc
atgtcaaccacagcctttgggctgggctccaagtactttgctctgtatgaagtggctggt
gtgggcatccagtggcacaccttcagccagtctcctgtagaaggtgacgacttcaacctg
ctgctgtccatgatgatgctgatcattgacaccgtggtgtatggagtgctgacgtggtac
attgaagcagtgcacccaggcatgtatggcctgccccggccctggtactttcccttccag
aagtcttactggctcgggaatggacggattgaaacctgggagtgtacctggccctggtca
cgaactactcgccttagcatcatggaggaggatcaagcctgtgcaatggagaacaggaga
ctggaggagacccgaggcattgaggaggagccgaaccacctgcccttggttgtctgtgtc
gacaagctcaccaaggtctacaagacagacaagaagctggcactgaacaagctgagtctg
aacctctacgagaaccaagtggtgtccttcctggggcacaatggggcaggcaagaccacc
actatgtccatcctgacaggcctctttccaccaacctcgggctctgccactatctatggc
catgacatccggacagagatggatgagatccggaagaacttgggcatgtgtccgcagcac
aacgtgctctttgacaagctgacagtggaggagcacctctggttctactcgcagctcaag
agcatggcggaggaggagatccgcaaggagatggataagatgattgaagacctggagctg
tccaacaagcggcactcgctggtgcagacgctctctggggggatgaagaggaagctctcg
gtagccattgcctttgtgggtggttcacgggctgtcatcttggatgagcccacagccggt
gtggatccgtatgcacgcagggccatctgggatctgatcctcaaatacaaaccaggaagg
accatcctcctctccacacaccacatggatgaggctgacctgctgggggaccgcatcgct
atcatttcccatggcaagctcaagtgctgtggctccccgctcttcctcaagagcacctat
ggggatggctacaagctgacagtggtcaaaaggcaatcagatgcccggaataacacagat
gtgtatacaaatgcaggacagactcacagccctccatcccattcttcagtcagcccgtgc
tccgagccccgggtctcccaattcatcaaaaagtatgttgcctcctgcttgctgatctcg
gacaccaacacagagctctcctacatcctgcccagtgaggctgtcaagaaaggctgcttt
gagaggcttttccagcacctggaacagagcttggatgatctggacctgaccagctttggg
ctaatggacacaaccctggaagaggtcttcctgaaggtctccgaggaggaccagtccttg
gagaacagtgatattgatgtgaaggagtccaagaaggatgccctgcagccaccagctccc
ccaatgggcccgaagcctgaggccaatggagagccccttcctgaagtggaggcacctgag
aagccagacgtggagctcagcaacctggtggcctgctccgagctggcccagtcccaggcg
tccctgcgctcggcttcctctgtgggctccgtgcggggtgatgaaggtggggcttattcg
gagttctatggggattactctccgttgtttgataatctgcaggaccctgataacatcagt
ctgcaagaccaagaggtcaatgctgaggctgaagaccaggccctggcaggacaggggagc
tttaagctggagggctcctggctcaagctacgccagttccacgggctgatagtcaagcgc
ttccactgtgccaaacgcaacaccaaggcccttttctcgcagatcctgctgcctgccttc
ttcgtttgcgtggccatgactgtggcactctcagtgcctgaaataggtgacctgccccct
ctgatcctctcaccgtctcagtatcacaactacacccagcccaagggcaacttcatcccc
tatgccaatgaagagcgacgcgagtaccgcataaagctgtctcctgatgccagccctcag
ctgctcgtcaacaccttccacctgccctcaggggtgggggccacctgcgtgctgaagaca
gccttcaacagcaccctagaccagctggtgcagaccttgaacctcaacagcaatgagtcc
aagatgctggcagccaagtactttgatgccatgtgtgttgactccttcacccagggcctg
ccgctgtccaactttgtgccaccacctccgtcccctgccccatctgactatcctgtctcc
atggacgaggacttgctgcatgcctggaactccaccacctacccctccactgtcaaagaa
accatcacctcggcaccgtccttgccccgcatcatccatgagccgattaagtgcacttgc
tccatgcaggggacgggcttctcctgccccagcggggtgggaggccacccgccccagatg
aaggttgtgacaggggacatcctagctgacatcaccgggcgcaatgtttcagagtacctg
ctttacacctcagaccgcttccgactgcacaggtatggggcgctcacctttggcaatgtc
cagaaatccatcccagcatcgtttggggtcaaggctcctcccacggtgcggaagatcgcg
gtcaggagaacagcccaggtcttctacaacaacaagggctaccacagcatgcccacctac
ctcaatgcgctgaacaacgccatcctgcgcgccaacttgcccaaaagcaggggaaaccca
gctgcctatggtatcacagtaaccaatcaccccatgaacaagaccagcgccagcctctcc
ctggattacctactgcaaggcacagatgtggtcattgccatcttcatcatcgtggccatg
tccttcgtgccagccagctttgtggtgttcctagtggctgagaaggctaccaaagccaag
cacctgcagtttgtgagcggctgtgacccagtgatctattggctggccaactatgtctgg
gatatgctgaactacctggtgccagccacctgctgcatcatcatcctctttgtgttcgac
cttccggcatatacctcttccaccaacttcccggccgttctctcgcttttcctgctctat
ggttggtctattacccccatcatgtacccagcctccttctggtttgaggtgcccagctca
gcttatgtcttcttgatcgttattaacctcttcattggcatcacggccaccgtcgcaacc
ttcctactgcagctctttgagcacgacaaggacttgaaggttgttaacagctacctgaag
agttgcttccttatcttccctaactacaacttgggtcacgggctgatggaaatggcatac
aacgaatacatcaatgaatactacgccaagatcgggcagtttgataaaattaaatcaccc
tttgagtgggacattgtgacccgtggcctggttgccatgacaattgaaggctttgttggt
ttcttcatcacgattatgtgccagtataacttccttcggaaaccacagcggctgcctgtc
tccaccaaacccatcgaggacgacatcgatgtggccaatgagaggcaccgggtcctgcgt
ggtgatgccgacaacgacatgctcaagatagagaacctgaccaaggtctacaagtcccgc
aagattgggcgcatcctggctgtggaccggctgtgcgtgggcgttcgtcctggggagtgc
tttggattgctgggtgtcaatggagcaggcaagaccaccaccttcaagatgctgactggg
gacgagagcaccacagggggagaggccttcatcaatggacacagcatcctgaaggagctg
ctccaggtgcagcagagcttgggctactgcccccagtttgatgccctcttcgacgagctc
acagctcaggagcacctggagctgtacacccggctgcgtggcattccctggaaggatgag
gagagggtggtgaagtgggcgctaaagaagctggaactcgacaaatacgctgacaagccg
gccagcacctacagcggaggcaacaagaggaaactgtccacagccatcgccctgattgga
tacccctcctttatcttcttggatgagcccacaacaggcatggaccccaaggcacgtcgc
ttcctgtggaacctcatcctggacatcatcaaaactggccgctcggttgtgctgacatcc
cacagcatggaggagtgcgaggcgctgtgcaccaggctggccatcatggtgaatgggcgg
ctcaagtgtcttggcagcatccagcacctgaaaaacagatttggagatggctacatgatc
acagtacggaccaagtccagcctcaacgtcaaggaagtagtgcggttcttcaaccggaac
ttcccagaggccatcctcaaggagcgacaccacaccaaggtgcagtaccagctcaagtcg
gagcagatctcactggcccaggtctttagcaagatggagcaggtggtggacgtgctgggc
atagaggactactcggtcagccagaccacactcgataatgtgtttgtgaattttgccaag
aaacaaagcgacaacctggagcagcaggagaccagccccaactgttccatccagtcaccc
ctggagcgtgtcctgagcttgctgcgcccacgtgctgcccccactgagctgcgggccctg
gtggtggaggaacctgaggatctggagactgatgacgagggcttgatcagctttgaggaa
gagagggctcagctctccttcaacacggacacactctgctga
DBGET
integrated database retrieval system
