Alligator mississippiensis (American alligator): 102569720
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Entry
102569720 CDS
T03087
Symbol
MSI1
Name
(RefSeq) musashi RNA binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102569720 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102569720 (MSI1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102569720 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
102569720
NCBI-ProteinID:
XP_019349172
LinkDB
All DBs
Position
Un
AA seq
400 aa
AA seq
DB search
METDASQPGLASPDSPHDPWYRRAAPARPGSRPPAPAGAPREPRWPRPSCVVAPRAPCRA
RAPRGAGGGGCARPPPSRALLAEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQ
AGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQ
FGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMS
PTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTGIAPGYTYQFPEFRVERT
PLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSTPSRTGGFLGTTSPGPMAELYGA
ANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggagacggacgccagccagcccggcctcgcctcgccggactccccgcacgacccctgg
taccgccgcgctgccccggcccggcccggctcccgacccccggccccggccggggccccg
cgcgagccccgctggccgcggccgagctgtgtcgtggctccccgcgctccctgccgggcc
agggcaccgcgaggggctgggggcgggggctgtgcgcggccccctccatcccgcgctttg
cttgcagagggcttgcgggagtacttcagccagttcggcgaggtgaaggagtgtctggtg
atgcgggacccgctgacaaagagatccagggggttcgggttcgtcacgttcatggaccag
gctggtgtggacaaggttctggcccaatccaggcatgagctggactccaagacgattgac
ccgaaggttgcattcccccgccgtgctcagcccaagatggtgacccggacgaagaagatc
tttgtggggggtctctcagtgaacactactgtggaggatgtgaaacaatatttcgagcag
tttggaaaagtggatgatgctatgctgatgttcgacaagacgaccaaccgacaccgaggg
tttggatttgtcacatttgagagcgaagacattgtggagaaagtgtgtgagatccatttc
catgagatcaacaacaaaatggtggaatgtaaaaaagctcagccaaaggaagtgatgtcc
cctactggctctgcgagagggcggtccagagtgatgccttacgggatggatgccttcatg
cttgggattggcatgctgggttatccaggtttccaagctgccacttatgccagtcgaagc
tacactggtattgcacctggctacacttatcagtttcctgaattccgtgtagagcggacc
cctctcccgagtgcccccgtcctccctgagctcacagcaattcccctcactgcgtatgga
ccaatggcagcggcagcagctgcagcagctgtagtgcgagggacaggctctactccaagc
cgtactggtgggtttctgggcactaccagtcctggaccaatggcagagctttacggagca
gccaatcaggattcaggggtcagcagttacatcagtgctgccagtccagccccaagtact
ggctttggccacagcctagggggtcccttgattgcaacagcttttaccaatgggtaccac
tga
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