Alligator mississippiensis (American alligator): 102569797
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Entry
102569797 CDS
T03087
Symbol
CDH20
Name
(RefSeq) cadherin 20
KO
K06807
cadherin 20, type 2
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102569797 (CDH20)
Cell adhesion molecules [BR:
amj04515
]
Cadherins
Major cadherins
102569797 (CDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
TAS2R
Motif
Other DBs
NCBI-GeneID:
102569797
NCBI-ProteinID:
XP_006258478
UniProt:
A0A151NFK1
LinkDB
All DBs
Position
Un
AA seq
800 aa
AA seq
DB search
MWTSGRMSNAKNFLGLGVSLYFWGLMDLTTTVLSGSAKPLTKSQEDNLSDKLLLHQRMKR
SWVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAI
QRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVASVPEMSP
VGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSRTGLIRTALMNMDREAKEYYE
VIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFLQKHYQMNVLESAPVSSTVGRVIAK
DLDEGINAEMKYSLVDGDGLDVFDINTDPNYQVGIITVRKPLSFESKKSYTLKVEGANPH
LEMRFLNLGPFRDTTTVHISVEDVDEPPVFEPSFYFVEVPEDVEIGTTIQIISAKDPDVT
NNSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREDISWHNITVMAVELNNPSQVGSVS
VTVKVLDVNDNAPEFARFYEAFVCENAKAGQLIQTVSAVDQDDPQEGQHFYYSLAPEAAN
NPNFTLRDNQDNTAWILTRRSGFRQHEQSTFYLPILITDNGRPRLSSTSTLTVHVCSCDD
DGVVISCNAEAYILPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIINEEENIH
ENIVRYDDEGGGEEDTEAFDIAAMWNPREAQVVVKSRQDMMPEIESLSRYVPQTCVMDSN
VHNYVLAKLYEADMDLWAPPFDSLQTYMFEGNGSVAESLSSLQSVTTDSDQSYDYLTDWG
PRFKKLAEMYGVTDGSGALW
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttcaggtagaatgagcaatgcaaagaattttcttggacttggtgtgtccttg
tacttttggggactgatggaccttactacaactgtgctatctgggagtgctaagccactt
actaaaagccaagaagataacctatctgacaagctgctactgcatcagcgaatgaagagg
agctgggtgtggaaccagttctttgttttggaagagtacacaggaactgaccctttatac
gttggcaagcttcattctgatatggacagaggggatggatcaatcaaatacatcctttcg
ggagaaggagctggcattgtatttacaattgatgatacgactggggacattcatgccatt
cagagactggaccgagaagaaagatcccagtatacactgagggcccaggccctggacaga
cggacaggcaggccaatggaaccagagtcagagttcattatcaaaatccaagatatcaat
gacaatgaacctaaatttctggatggaccttatgtagcttctgttccagaaatgtcacca
gtgggtacctctgttattcaggtgacagcaacagatgctgatgatccaacatatgggaat
agtgccagagtagtctacagtattctccagggacaaccatatttctctgtggactccagg
acaggcctaattaggacagctctaatgaacatggacagagaagcaaaagaatattatgaa
gtgattatccaggccaaagacatgggtggacagctgggaggattggctgggacaaccaca
gtcaacatcaccctctctgatgtcaatgacaatccgcccagattcctacagaaacattat
cagatgaatgtgctggagtctgctccggtcagctccactgtgggccgtgtcattgctaag
gacctggatgaaggcattaatgctgaaatgaaatacagcctagtggatggagatggacta
gatgtctttgacattaacactgatcctaattaccaagttggcatcataactgtgagaaag
cccttaagttttgagagcaagaaaagctatactttaaaagttgaaggtgccaacccccac
ctggaaatgcgtttcctgaatctgggtcctttccgggacactacaactgtgcacatcagt
gtggaggatgtggatgagccgcctgtgtttgaacccagcttttattttgtggaagtgcct
gaggatgtagagattggaaccaccatacaaatcatttctgccaaggaccctgatgtgacc
aacaactcaatcagatactcaattgatagaagcagtgatcctggaaggtttttttatgtc
gacattacaacaggagcactgatgactgcaagacctcttgaccgagaagacatttcttgg
cacaatatcactgtgatggctgtggagctgaacaacccctcacaagttggcagtgtatca
gtcacagtcaaggtcctggatgtgaatgacaatgctcctgaatttgccaggttctatgaa
gcttttgtgtgtgaaaatgcaaaagctggccagctcattcagacagtgagtgcagtagac
caggatgacccgcaggagggtcagcacttctactacagcttggctcctgaggcagctaac
aaccccaactttactctaagggacaatcaagacaatactgcctggattttaaccagacga
tctggcttcagacaacatgagcagagcaccttttacctccctatcctcatcactgacaat
gggcgccccaggctgagcagcaccagtacattgactgtccatgtgtgcagctgtgatgat
gatggtgtggtgatctcctgcaatgcagaggcctacattctccccgtcagcctaagtaga
ggcgcgcttattgcaatcctggcctgcatctttgtcttgttagtgctagtgctgctcatc
ttatctatgaggcggcacaggaaacagccgtacatcatcaatgaagaagagaacatccat
gaaaatattgtcaggtacgatgacgaaggaggcggtgaggaagacacagaggcctttgat
attgctgctatgtggaaccctagggaggcccaggtggtggtgaaaagcaggcaggacatg
atgcctgaaatagagagcctctccagatatgtgcctcagacatgtgtgatggatagcaac
gtccacaattatgtgctggccaagctgtatgaagctgacatggacctttgggctcctccc
ttcgactcccttcagacgtacatgtttgaagggaatggctcagtagcagagtcacttagc
tcattacagtccgtcacaacagactcagaccagagctacgactacctgacagactgggga
cctcgctttaaaaagctggccgagatgtacggtgtcacagatggcagtggggctctgtgg
taa
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