Alligator mississippiensis (American alligator): 102569957
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Entry
102569957 CDS
T03087
Symbol
ARID5B
Name
(RefSeq) AT-rich interaction domain 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102569957 (ARID5B)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
ARID
102569957 (ARID5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
102569957
NCBI-ProteinID:
XP_006273143
LinkDB
All DBs
Position
Un
AA seq
1187 aa
AA seq
DB search
MEPNSVQWVGSPCGLHGPYIFYKAFQFHLEGRPRILSLGDFFFVRCKPEDPICIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVTVKLEDLAKWAQSDFSKW
KSGFRADPVKPTELGKNGQKESLMRYRQSTLNSGLNFKDILKEKADLGEEDEDSSLLILS
YPQYCRYRSMLKRLQDKPSSVLTDQFVLALGGIAVTSKSPQIFYCRDTFDHPTLIENESI
CDEFAPNLKGRPRKKKPYPQRRDSLNGVKDSNNNSESKAVAKVKCEARSAFPKPKNNNGN
CKKSSSEDKSKVAVGEECKADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAA
QKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPP
LKPRKQDISSQEGETKTKVAGTKRIKNENQKSKKEKDNAQKPQDAAEVSSDQEKDQEISD
QKGLSEPPEVGEMKKHVEGHQPLLPEAAGLGSLEKEDLMESTSNNDTAQEDVQHSSSFST
IAVPPEQDTTLDATVNKQLHTPPNALDDTKPEQRAHGFTDSLEKEPPETPIHGFPAIQVQ
LPSQNDMEDDKLPEMADYIANCTVKVDQLGNEDIHNALKQTPKVLVVQNFDMFKEKELPG
SVHDDPSFSYTPLLYSKGNPGIMSPLAKKKLLSQVSGAALSCSYPYGSPPPLISKKKLNN
RDELSSSTAQAPHTPNSDSVAVNRPSVIQHVQSFKSKISEERKSINEVFRHDILSKPDPQ
RCDFSKHHLNSLAESYIPKLDLQDSKDKMSEKRVLQHSHVPSFLADFYSSPHLHSLYRHT
EHHLNNEQTSKYLPRDMFRDSENISTFTQHKHQDKLHLNYHPSLHQQEKKTVVEASSDDQ
PTDLSLPKSIHKQTVKAPGSSLPHSSVGQQESKSISQFQVASSQALSIDCNPKACRVSPM
TMAASKKHGESLHRSGKQQNQRLENLRKMEGMVHPVMSRKTSPQTIGAARPLKRSPEDLD
KVIIEKKIRAVSPLHLPKEASTKEKTADHEGEGSKSVHGLHSGSMLESHKFPLSSPIFTG
LYPGTLCAGLNNRLPAGYSHPLQYLKNQTVLSPLMQPLALHSFMVQRQFLTSPANSQHLY
RHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPPSQLSSVHPSTKL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcggtccagtgggtcggttctccgtgtggtttgcacggaccttacatt
ttctacaaggcttttcagttccaccttgaaggcagaccaagaattttgtcccttggcgac
ttcttctttgtaagatgtaagccagaggatccgatttgcatagcggagctccagctgttg
tgggaagagaggactagcaggcaacttttatccagctccaaactttattttctcccagaa
gatactccccagggcagaaatagtgaccacggcgaggatgaagttattgctgtttcagag
aaggtaactgtgaagcttgaagacttggcaaaatgggcacaatcagatttctccaaatgg
aagagtggtttccgagctgacccagtcaaacccacggaactaggcaagaatggacagaag
gaatccttgatgagatacagacagtccacactcaatagtggcctgaacttcaaagacatt
ctgaaggaaaaggctgatcttggtgaagaagatgaagattcaagtctcttgatccttagt
tatccacaatactgtcgatatcgttccatgctaaagcgtcttcaagacaagccatcctca
gtattaacagaccagtttgttttagctcttggtggcattgcagtaacaagcaagagcccc
caaatcttttactgtcgggatacatttgatcacccaactcttatagaaaatgaaagcata
tgtgatgaatttgcaccaaaccttaaaggcagaccacgcaaaaagaagccatacccacag
agaagagattcattaaatggcgttaaggattccaacaataattctgaaagcaaagctgtt
gccaaggtaaaatgtgaggccaggtcagcttttcccaaacccaagaataacaacggcaac
tgtaaaaaaagttcaagtgaagataaatcaaaggttgctgtaggtgaagaatgcaaagct
gatgagcaagctttccttgtggcactttataaatacatgaaagaaaggaaaacaccaatt
gaacgaataccctatttaggttttaagcagattaacctttggactatgtttcaagctgct
caaaaactgggaggatatgaaacaataacagcccgtcgacaatggaaacatatttatgat
gaattaggtggtaaccctggaagcacaagtgctgctacatgtactcgcagacattatgaa
agattaatcctgccatatgaaagatttattaaaggagaagaagataagccactgcctcca
ttgaaacctcggaagcaggatatcagttcccaggagggggaaactaaaacaaaagtggct
ggaacaaaacgcatcaaaaatgaaaaccaaaagagtaagaaagaaaaagataatgcacag
aaaccccaagatgcagctgaggtctcatcagaccaagagaaggatcaagaaatttcagac
cagaaaggtttatctgagcctcctgaagtgggagagatgaagaagcatgttgaagggcac
cagcctctcttaccagaggcagcagggctgggctccctggagaaggaggacttgatggaa
agtacttcaaacaacgatacagcccaggaggatgttcagcactcatcctcattttctact
attgctgtaccccctgaacaagacaccacattggatgccactgtcaacaagcagttacac
accccaccaaatgccctggatgacacaaagccagaacaaagggcacatggttttacagac
agcttagaaaaggagcctccagaaacacccattcatggtttccctgcaatacaagtacag
ttaccaagtcaaaacgacatggaagatgataaattgccagagatggctgattacattgca
aactgcacggtgaaagtggatcagttaggaaatgaagatatacataatgcactaaagcaa
acccctaaagttctcgtggtacagaattttgatatgttcaaagaaaaggagctgcccggt
tccgttcatgatgatcccagttttagttacacaccactactctattcgaagggtaatcca
ggcatcatgtcaccactggcaaagaaaaaacttctgtctcaggtcagtggggcagctctg
tcatgtagctatccttatggttcacctccacctttgattagcaaaaagaaattaaacaat
agagatgaactatcttcaagtacagcacaggctccccacactcccaattctgattctgta
gcagttaatagaccatcagtaatacaacacgtacagagttttaaaagcaagatttcagaa
gaaaggaaatctattaatgaagtatttaggcatgacatattaagcaaaccagatcctcag
cgttgtgatttttctaaacatcacctcaactctcttgctgaatcgtacataccgaagcta
gatctccaggactccaaagataaaatgagtgagaaaagggtactgcagcattcccatgtg
cccagtttcttggcagatttttattcatctcctcatctgcacagtctttataggcataca
gaacaccaccttaataatgaacagacatcaaagtacctcccccgggacatgttcagagat
tcggaaaatatttctacttttactcaacacaaacaccaagacaagctacatttaaattat
cacccatctttgcatcagcaagaaaaaaagactgtagtggaagcctcttcagatgatcag
ccaacagacttgagtcttccaaagagcatacacaaacagactgttaaggctcctggatcc
agcctcccccattcatcagtggggcagcaagaaagcaaaagtatttcccagttccaagtt
gcaagcagccaggctttgagcatagactgtaatcccaaagcctgccgcgtttctccaatg
accatggcagcatctaaaaagcatggtgaatcccttcacagatccggaaagcagcagaat
cagaggcttgagaatttgagaaagatggaggggatggtccatcccgttatgagccgcaaa
actagcccccaaaccattggagcagctcggcctttgaaacggagcccggaggatttggac
aaggtcattattgaaaaaaaaatccgagctgtctctcctctgcacttacccaaggaggca
tctacaaaagaaaagactgccgatcatgagggcgaaggcagcaaatcagtgcacggtctt
cattctggcagcatgttggaaagccacaaatttcccctttccagccctatcttcacaggc
ttgtacccaggaaccctgtgtgcagggctgaacaatcgcctcccagctggatactctcat
cctttgcagtacttgaaaaatcagaccgtgctttcccccctaatgcagcctttggctctt
cattccttcatggtgcaaagacaatttcttacatcccctgcaaattctcagcacctctat
agacacttagctgcagcaacacctgtaggaagttcatatggtgaccttttgcacaacagc
atttatcctttagctgctataaatcctcaagctgcctttccaccttctcagctgtcttct
gtacatcctagcacaaaactgtaa
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integrated database retrieval system
