KEGG   Alligator mississippiensis (American alligator): 102570052
Entry
102570052         CDS       T03087                                 
Symbol
RRP9
Name
(RefSeq) ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
  KO
K14793  ribosomal RNA-processing protein 9
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amj03009]
    102570052 (RRP9)
Ribosome biogenesis [BR:amj03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    102570052 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR54 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_WDR19_1st WD40_RFWD3
Other DBs
NCBI-GeneID: 102570052
NCBI-ProteinID: XP_006275209
UniProt: A0A151MEN4
LinkDB
Position
Un
AA seq 487 aa
MAASGRKKQQQQEAAAVAAAAGGAGRKRRKLPGAEEKPRQKVAAAKLNEEISSDSDVESP
ALSGKRKRDNEAEEEIEETAQEKKLRLAKLYLEQLRQQEEEKAEEEAFKEELVAGRLKED
VLEQKGKLQRLIAKDLQPPDPAEIRVLRGHQLPITCLVISPDDKYIFSAAKDCSIIKWDV
ESGKKEHVIRGGKKGTEGHVGHTAHILCMAISSDGKYLATGDRNKLIMIWEAATCKHLYT
FTGHRDAVSGLSFRKGTHQLYSASHDRSVKVWNVAENAYVETLFGHQDVITGLDSLSREC
CVTSGGRDGTIRVWKIPEESQLVFYGHQGSIDCVQLINEEHMVSGADDGSVALWGLSKKK
PLATVRQAHSNHGAQGLEQPYWISSVAAMLNSDVVATGASRCSCSASVRLWKCNEGFRKL
ELLFDIPLVGFVNSLKFSNAGDFLVAGIGQEHRLGRWWRIKEAKNSICIIPLKRMAAASS
VQTGEGS
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggcggcgtccggcaggaagaagcagcagcagcaggaggcggcggcggtggccgcggcc
gcgggcggggccgggcgcaagcggcgcaagctccccggcgcggaggagaagccccggcag
aaggtcgccgctgccaagctcaacgaggagatctccagcgactcggacgtcgagagccct
gcgttatctgggaagcggaagagggacaatgaggcggaagaggagatcgaggagacagct
caggaaaagaagctgagattagccaaactgtacttggaacagcttcgtcagcaggaggag
gaaaaggctgaagaggaggctttcaaggaggaattggtggctggccgcctgaaagaagat
gtgctcgaacaaaagggaaaactgcagcgactgatcgccaaagatctgcagcctccagat
ccagcagaaatcagggtgctacgagggcaccagctgcccatcacctgcctggtcatcagt
ccagatgataagtacatcttctcagcggccaaagactgctccatcatcaaatgggatgtg
gaaagcgggaagaaggagcacgtgatccgtggagggaagaagggcacagaagggcatgtt
ggccacacagcacacattctctgcatggctatctcctcggatggcaaatacctggccaca
ggagacaggaacaaactgatcatgatctgggaggctgcaacctgcaagcacctgtataca
ttcaccgggcatcgagatgctgtatcgggcctgtcatttcggaaaggcacgcaccagctg
tacagtgcctcacacgatcgctctgtcaaagtctggaacgtggcagagaacgcctacgtg
gagacactgtttggacaccaggatgtcatcacaggactggacagcctgagtcgggaatgc
tgcgtcacatcaggtgggagagatggcaccatccgggtctggaagatccctgaagagtct
cagcttgtgttctacgggcaccagggctccattgactgcgtccagctgatcaatgaggag
cacatggtatctggtgcagatgatgggtctgttgccctttggggtctttcaaaaaagaaa
ccactagcaactgtgaggcaagcacacagtaaccatggtgctcagggactggagcagccg
tattggatctcctcagtggctgccatgctgaacagtgacgttgtagctacaggtgcctcg
cgctgctcatgcagcgccagtgtgaggctgtggaagtgcaacgagggattccgcaagctg
gagctgctcttcgacatccccctggtgggctttgtcaacagcttgaagttctcaaatgca
ggggacttcctggtggctggaatcgggcaggagcacaggttgggccgctggtggcgaatc
aaagaagccaagaacagcatctgtatcatccccctgaagaggatggcagcagctagcagt
gtgcagacgggtgaaggctcctaa

DBGET integrated database retrieval system