Alligator mississippiensis (American alligator): 102570092
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Entry
102570092 CDS
T03087
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04142
Lysosome
amj04144
Endocytosis
amj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102570092 (CLTC)
04142 Lysosome
102570092 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102570092 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102570092 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102570092 (CLTC)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102570092 (CLTC)
Exosome [BR:
amj04147
]
Exosomal proteins
Proteins found in most exosomes
102570092 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
102570092
NCBI-ProteinID:
XP_006265697
LinkDB
All DBs
Position
Un
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDERMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIHFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
DKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYTM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcacctgcagctccagaacctgggtatc
aacccagctaatattggtttcagtactctgacaatggagtcagacaaattcatctgcata
agagagaaggtaggagaacaagcgcaggtggtgatcattgacatgaatgaccccagcaat
cccattcgcagaccaatttcggctgacagtgctatcatgaaccctgccagcaaagtcatt
gcactgaaagctgggaaaacccttcagatctttaacattgagatgaagagtaaaatgaag
gctcataccatgacagatgatgtgaccttctggaagtggatctctctgaatactgttgct
cttgtgactgacaatgcagtctaccactggagcatggagggagagtctcagccggtgaaa
atgtttgatcgccattctagcctcgcaggctgtcagatcatcaactatcgtacagatgct
aagcagaagtggcttcttctgactggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctttattctgtagatagaaaagtgtcccagcccattgaagggcatgcagctagc
tttgcacaattcaaaatggaaggcaatgctgaggagtcgactctcttttgttttgcagta
agaggacaagctgggggcaagttacatatcattgaagttggcaccccgccaacagggaac
cagccatttccaaagaaagctgtggatgtgttctttcctcctgaagcacagaatgacttt
cctgtagcaatgcagatcagtgataagcatgatgtggtattcctgataacaaaatatggc
tacatccatttgtatgaccttgaaacgggcacctgtatctacatgaacagaattagtgga
gaaaccatatttgtcactgcaccacatgaagcaacagctggaatcataggggttaacaga
aaaggacaagtgctttcagtatgtgtggaagaagagaacatcattccttacatcactaat
gtgctgcagaatcctgacctggctctgcggatggctgtccgcaataatttggcaggagct
gaggaactgtttgctcgtaaattcaatgcactctttgcacaaggaaattactccgaggca
gccaaggtggcagccaatgcaccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttcctgctcagcccggtcagacttctcccttgctccagtattttggaatc
ctgctggaccaaggtcagctgaacaagtacgagtctctggaactctgcaggccagtactt
cagcagggacgcaaacagctgctggagaaatggttaaaagaagacaagttggagtgctcg
gaggaattgggagacttagtgaagtctgttgatcctacactggcacttagtgtctatctg
agagctaatgttcctaacaaagtcattcagtgttttgctgaaactggacaagtccagaag
atagttttgtatgccaagaaggttggatatactcctgactggattttcttattgagaaat
gtcatgcgcatcagccctgatcaagggcagcaatttgctcaaatgctggttcaggatgaa
gagcctcttgcagatatcacacagattgtggatgtctttatggagtataacttaattcag
caatgtaccgcctttcttttggatgcactgaagaataatcgtccctctgagggtcccctc
caaacacgcttacttgaaatgaacctcatgcatgcacctcaggttgcagatgccatcttg
ggaaaccagatgtttactcactatgacagggcccacattgctcagctctgtgagaaagct
ggcttgctgcagagagcactagaacacttcactgacttgtatgatatcaagcgtgcagta
gttcatactcatcttctcaaccctgagtggctggtgaattattttggctccctctctgta
gaggactcactagaatgcctgcgtgctatgctgtctgctaacattcgtcaaaacctgcag
atttgtgtccaagtagcttcaaaataccatgaacagctctcaacacagtcactcattgag
ctgtttgagtctttcaagagctttgaaggtttgttttatttcttgggttccattgtaaac
ttcagccaagacccagatgtgcacttcaaatatattcaagctgcatgcaagacgggccaa
atcaaagaagttgaaagaatctgcagagaaagtaactgctatgatccagagagggttaaa
aactttttgaaggaagcaaaactgactgaccagttaccacttatcattgtgtgtgatcgc
tttgattttgtccatgatctggtactgtacctgtacagaaacaatcttcaaaaatatata
gagatctacgtacagaaggtaaatccaagccgtcttcctgttgtcattgggggactgctt
gatgtggattgctctgaagatgttataaagaatctgattcttgttgtgagaggccagttc
tcaactgatgagcttgttgcagaagtagaaaaaagaaacaggctgaaactgcttctacct
tggttggaagcaaggattcatgagggttgtgaggagcctgctactcacaatgcattagcc
aaaatatacatagacagtaacaacaacccagaaagatttctccgtgagaatccttattat
gatagtcgtgttgtggggaagtactgtgagaagagagaccctcacctggcctgtgtggct
tacgagcgtgggcagtgtgacttggagcttattaatgtatgcaatgaaaactcactcttc
aagagcctttcgcgttacttagttcgccgcaaggaccctgagttgtgggccagtgtgctg
ttggaaagcaacccttacagaagaccacttattgaccaggttgtgcagactgcactgtcg
gagactcaggaccccgaagaagtgtctgttactgtaaaagctttcatgactgcagatctt
cccaatgagctcattgaactgctggagaaaatagttctggataactctgtattcagtgaa
cacaggaacctgcagaacctcctcattctcacagctattaaggctgaccgcactcgcgtc
atggaatatatcaaccgtctggataattacgatgctccagatattgccaacattgctatc
agcaatgagctttttgaggaggcttttgccatcttcagaaaatttgatgtcaacacctca
gctgtgcaggtattgattgaacacattggaaacctggaccgtgcatatgagtttgctgaa
cgctgcaatgagcctgctgtgtggagtcagcttgctaaagcgcagcttcagaaagggatg
gtaaaggaagcaattgactcctacattaaagcagatgatccttcctcctacatggaagtt
gttcaagctgctaatgccagtggaaactgggaagagctggtgaagtacctccagatggca
cgcaagaaggcccgagagtcatatgtggaaaccgaactcatttttgctctggctaagaca
aatcgtctagctgagttggaagagtttatcaatggacctaataatgctcacattcagcag
gttggcgatcgctgttatgatgagagaatgtatgacgctgctaagctattgtataataac
gtatcaaactttggccggctggcatccacgctagtccacttaggtgaataccaagcggct
gtagatggtgctcggaaagcaaacagtactcggacatggaaggaggtctgctttgcctgt
gttgatgggaaagagttccgtctagcccagatgtgtggacttcatatcgtagtgcatgca
gatgagctggaagaacttatcaactattaccaggatcgtggctattttgaagagctgata
accatgttggaagctgcgctaggacttgagcgtgcacacatgggcatgtttacagagcta
gcaatcctgtattctaaattcaagccacagaagatgagggagcacttggaactcttctgg
tcaagagtcaatattcccaaggtgctaagagctgcagaacaagctcacctctggggtgaa
ctggtgttcctgtatgataaatatgaagagtatgacaatgctatcatcacaatgatgaac
cacccaacagatgcttggaaagaaggacaatttaaagacataatcacaaaggtggctaat
gtggagctgtattataaagcaatccatttttatttggagtttaaacccttgctgctcaac
gaccttctgatggtgctgtctccccggctggatcatactcgtgctgtcaccttcttcagt
aaggttaaacagctgccgctggtgaaaccttacttgcgctctgttcaaaaccacaacaac
aaatctgtgaacgagtcgctgaataatctcttcattatagaagaagactatcaggctctt
aggacatctatagatgcttatgacaactttgacaacatttccctcgctcagcgtttggag
aagcatgaactgatagagttcaggagaattgctgcctatctctttaaaggcaacaaccgc
tggaaacagagtgtagaactctgcaagaaagacagactttacaaggatgcaatgcaatat
gcttcagaatccaaagatacagagttggccgaagaattgctgcagtggttcttgcaggaa
gacaagagggaatgctttggagcttgcctctttacctgctacgatcttctgaggccagat
gttgtcttggaaactgcatggaggcataacatcatggactttgccatgccctattttatt
caggtcatgaaagagtacttgacaaaggttgacaaactggatgcctctgagtctctgaga
aaggaagaggagcaagctacagaaacgcaaccaattgtttatggtcagccacagctaatg
ttgacagcaggacccagtgttgcagttcctccacaagcaccttttggctacggctatact
gcacctccatatgggcaacctcagcctggttttggatataccatgtaa
DBGET
integrated database retrieval system
