Alligator mississippiensis (American alligator): 102570109
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Entry
102570109 CDS
T03087
Symbol
NUP54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102570109 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102570109 (NUP54)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102570109 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102570109
NCBI-ProteinID:
XP_006270882
UniProt:
A0A151MNC4
LinkDB
All DBs
Position
Un
AA seq
502 aa
AA seq
DB search
MAFNFGATGGAGATNPTGAFGGFGTTTTTAGPAFSFSAPANTGTTGLFGATQNKGFGFGT
GFGTATGTGTGLGTGLGTGLGFGGFSTQQQQTTLGGGLFSQPTQAPAQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVDFTQENPFCRFKAVGYCCMTNTK
DEDGLVVLVFNRKETDIRSQQQQLVESLHKILGGNQTLSVNVEGVRTMPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQANIKTSLQQLGVTMSMARTELSPAQIKQLLQNAPAGVD
PIIWEQAKVDNPDPEKLIPVPMVGFRELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVRAEEKYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLIEHGLNESIPIRGSVFS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggcgaccgggggtgccggcgccaccaaccctacgggtgcattt
ggagggtttgggacaacaaccaccacagctggaccagcatttagcttttctgctcctgcc
aacacaggtaccactgggctttttggtgctacccagaacaaagggtttggatttggtact
ggttttggcacagcaacaggaactggtactggtttaggtactggtttaggaactggatta
ggctttggaggattcagtacacaacagcagcagactacattaggaggtggcttgttcagt
cagcctactcaggcacctgcccagtctaaccagctgataaatactgccagtgctctttca
gctcctacgctcttgggagatgagcgagatgcgattttggcaaagtggaaccagctacag
gctttttgggggacaggaaaaggatactttaacaacaacattgctccagtggacttcaca
caggaaaatcccttttgcagatttaaggctgtgggctattgttgcatgaccaacactaag
gatgaagatgggctagtggtcttggtcttcaataggaaagagacagatatccgaagccaa
cagcagcagctagtggaatctctgcacaaaatactgggaggaaaccagaccctcagtgtt
aatgtagaaggtgttagaacaatgccagatgaccagactgaagtcgtcatttatgttgtt
gagcggtcacccaatggcacttccagaagagttccagcaacaaccttgtatgctcatttt
gagcaagctaacataaagacgtcgctacagcagctgggcgtcaccatgtccatggcaaga
acagaactttctcctgcacaaatcaaacagcttttacagaatgctcctgctggcgttgat
cctattatctgggaacaagccaaagtggataatcctgatcctgaaaaacttattcctgtg
ccaatggtgggtttcagagaactgctgagaagattgaaggtccaagatcaaatgactaaa
cagcatcaaaccagattagatataatatcagaagatattagtgagctacagaaaaatcag
accacaactatggcaaaaatagcacagtacaagaggaaactaatggatctttctcacagg
actttacaggtgttaattaagcaagagatacagaggaaaagtggctatgccattcaggct
gatgaggaacagcttcgtgtacagttagacacaattcaatgtgaactcaatgcacctact
cagttcaagggtcggttaaatgaattaatgtcccagatcaggatgcaaaatcattttgga
gctgtgagggctgaagagaaatactacatagatgcagacctcttaagggaaatcaagcaa
catttaaagcagcaacaagaaggcctgagtcacttgatcagcattataaaagatgatttg
gaggatataaaactaatagaacatggactgaatgagagtatcccaatcagaggaagtgtc
ttcagttga
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integrated database retrieval system
