Alligator mississippiensis (American alligator): 102570169
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Entry
102570169 CDS
T03087
Symbol
VPS11
Name
(RefSeq) VPS11, CORVET/HOPS core subunit
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04140
Autophagy - animal
amj04148
Efferocytosis
amj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102570169 (VPS11)
04148 Efferocytosis
102570169 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102570169 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102570169 (VPS11)
Membrane trafficking [BR:
amj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102570169 (VPS11)
Hops complex
102570169 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
TPR_Vps41
zf-C3HC4
zf-rbx1
zf-C3H2C3
TPR_GEMI5
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
GPS2_interact
DivIC
zf-RING-like
ISG65-75
zf_RING_Vps8_fungal
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
102570169
NCBI-ProteinID:
XP_014448920
LinkDB
All DBs
Position
Un
AA seq
928 aa
AA seq
DB search
MAAYLQWRRFVFFEREAVKEPPGPDGGGKPLALPPGLAVCDSGRGSLVFGDMEGQIWFLS
RSLQLSSFQAYKLRVTHLYQMKQHSILASVGEDEEGINPLVKVWNLEKRDGGNPLCTRIF
PAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGL
AFRQSGKTTHLFVVTTENIQCYTLSVKDYPRLELDTHGCGLRCSTLSDPSQDLQFIVAGN
ECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDPKCSPKSEFAGSDPQSSDKQILN
IYDLYNKFIAYSSIFDDVVDVLAEWGSLYVLTRDGKIHALQEKDTQTKLEMLFKKNLFEM
AINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQR
IHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKVL
RQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALRYIGKLPYDQAESNMKRYGKILM
HHVPNETTELLKILCTDYRPSGDCEGPGMLEVKKANSEEFIPIFANNSRELKAFLEHMTE
VQYDSSQGVYDTLLELRLQNWAHERDPQIKEKLHSEAITLLKSGRFRDVFDKALVLCQMH
NFKDGVLYLYEQGKLFQQIMHYHMQNEQYRKVIEVCELYGDQEACLWEQALSYFARKEEN
CKEYITAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQKQSRQIEQDEQRI
QKYREETTKIRQEIEELKTSPKIFQKTKCSICTGALELPSVHFLCGHSFHQHCFESYSES
DSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLI
TDLPPGKSATTIDAGLQRELLIHTKRST
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacctgcagtggcggcgcttcgtcttttttgagcgcgaggcggtgaaggag
ccgcccgggcccgacggtggcgggaagcccctggcgctgcccccgggcctcgcggtctgc
gactcgggccgcggcagcctcgtcttcggcgatatggaaggtcagatctggttcttgtca
cgttcccttcaacttagcagcttccaggcttataaactgcgagtcacacacctgtaccag
atgaagcagcacagtattttggcgtctgttggtgaagacgaagaaggtattaatcccttg
gttaaagtctggaacctggagaagcgagatggtgggaatccactttgcacaagaattttt
cctgcaataccagggaacaaacccacagttgtatcctgcttaactgtccacgagaatctt
aatttcatggctattggttttgcagatgggagcgtagtgcttacaaaaggggacatcaca
cgggatcgacacagtaagacccagatcttgcatgaaggcagttacccagttactggcctt
gccttcagacagtctggcaaaaccacacatctctttgttgtaaccactgagaacatccag
tgctacacattgtctgtgaaggattatcctcgtctggagctggacactcatggttgtggc
ttgcgctgctctaccctcagtgacccttctcaggatctccagttcattgtggcagggaat
gaatgtgtctatctgtaccagccagatgagcggggtccctgctttgcttttgaggggcag
aagttgatcgttcactggtatcggggatacctcatcattgtttccaaggacccaaagtgc
tctccaaaatctgagtttgctgggagtgatccacagagttcagacaagcaaatcttgaac
atctatgacctgtataacaaattcatcgcctacagctcaatctttgatgatgtggttgat
gtattagctgagtgggggtctctctacgtgttgaccagagatgggaaaatccatgcactg
caagagaaggatacacaaaccaaacttgagatgctgttcaaaaaaaacttgtttgagatg
gcgattaacctggccaagagtcaccatttggacagtgatggcttatcagagattttcagg
cagtatggagatcatctgtacaacaaagggaaccatgatggagctattcagcagtatatc
cgcaccattgggaaactagagccatcttacgtcatccggaagttcctggatgcacagcgc
atccacaacctgacagcctacttgcagacgctccatctgcagtccttggccaatgcagac
cacaccacattgctgctgaactgctacaccaagctcaaagacagttccaaattggaagag
ttcatcaagactagtgagagtgaagttcactttgatgtggagacagcaatcaaggtgctc
cgtcaagcaggttactactcccatgctgtgtacctggcagaaaagcatgcgcaccatgaa
tggtacctcaaaatccagctggaggatatcaagaattaccaggaggccttgcgttacatt
ggcaagctgccctatgaccaggcagagagcaatatgaagcggtatggcaaaatcctcatg
caccatgtccccaatgagaccacagaactcttgaagatcctgtgcacagattaccggcca
tcaggagactgtgaagggcctgggatgctggaggtgaaaaaggctaattctgaggagttc
attccaatatttgcaaacaactctcgggagctgaaggcttttctggagcacatgacagaa
gtgcagtacgactcttcccaaggtgtctatgacacgctgctggaactccggctccagaac
tgggcacatgaacgggatccacagatcaaagagaaacttcacagtgaagccatcacctta
ctgaagagcggaaggttcagagatgtctttgataaagccttggtcttatgtcagatgcac
aacttcaaggatggagtcctctacctctatgaacagggcaaactttttcaacagatcatg
cattatcacatgcagaatgagcagtacaggaaggtgattgaggtatgtgagctgtatgga
gaccaagaggcatgcctctgggaacaggctctcagctattttgcccggaaggaggagaac
tgcaaggaatacatcacagcagtgctgaaacacatagaaaacaagaacctcatgcctcca
ctgcttgttgtgcagactctggctcacaactccacagccacgctatctgtgattaaggat
tatctgatcaacaagctgcagaagcagtctcgtcagattgagcaggatgagcagaggatt
cagaagtaccgtgaagaaaccacaaagatccgccaggagattgaagagctcaaaacaagt
cccaagatcttccagaagacaaaatgcagcatctgtacaggtgccctggagctgccgtct
gtccacttcctgtgtggccattccttccatcagcactgctttgagagctactccgagagc
gattctgagtgtcccacctgcatgccggaaaaccgcaaagtcatggacatgattcgagcc
caagagcagaagagagacctacacgatcagtttcagcatcagcttaagtgctctaatgat
ggcttctccgttgttgctgactacttcggtcgtggagttttcaacaagctcaccctcatc
acagacctgccgccaggcaaatctgctacgactattgatgctggtttacagagggaactc
ctcatccatacgaaacgcagcacctag
DBGET
integrated database retrieval system
