Alligator mississippiensis (American alligator): 102570255
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Entry
102570255 CDS
T03087
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes 1B
KO
K06636
structural maintenance of chromosome 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04110
Cell cycle
amj04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102570255 (SMC1B)
04114 Oocyte meiosis
102570255 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102570255 (SMC1B)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102570255 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
102570255 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
AAA_15
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
102570255
NCBI-ProteinID:
XP_014461865
LinkDB
All DBs
Position
Un
AA seq
1241 aa
AA seq
DB search
MPAMGYLKLLTMENFKSWRGRQSVGPFMRFTCVIGPNGSGKSNLMDALSFVMGERTANLR
VKNIQELIHGAHVGKPVSSVASVKMVYCEENGKEKTFARIIQGSSSEFLFNDKPVSQSVY
TAELEKIGIIVKARNCLVFQGEVESIAMKKPKERTQLFEQISNSRGLTEEYEKKKKKMQQ
ADQDTQFNFNQKKNAAAERKHAKLENEEAERYQMLLGELKENRIQLQLFQLYHNEKKIEF
LQNKLDEKNTEIRSKKDSLSNAEDTFKAKKKVCGILNRDQQSIEKKMKTVEASLSQKRPR
YIKAKENTSHQIKKVDMAKKCLKDNEKQYGAQKQGIQEMEIELADIETAWATFKKKVEEE
MVQRGTDIELEESQLDRYKQLKELVRKKVATLMQQLEKLQWEQKADQEKMALDQRKQKEI
EESIKQVEEQIEDHKKRIEKLEEYTKACTDSLTEKRKQEETLTAEIENSRIRMAEVNEEL
NKLYDELQNARIDYHEGKRQQMRAEILESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKV
FGSYMNAIVVTTEKIARNCIRFLKEERVEPETFLALDYLDIKPINEKLRELKGSKMMIDV
VQTPLASLKKVLQFVCGNSLVCETIKEAKQIAFDGPLRLKTVALDGTLFLKSGVISGGSS
DLRFKARRWDEKDINKMKEKRDNLANELKELMKIRRKETDLKQLQAQCQGTQTRLKYSQS
ELEILKKKQLANFYKEKSKLESELVNIKSECAMLNEGLAQRVRKMEEFQKKINEVEDSIF
QEFCEEIGVENIRVYEQEHVKQQEEIDRKRLEFENQKTRLSIQLEFSRGQLQKQINKISA
LKEAVHKDEAEIVNLKKDEEKCLLMVNEVMEEQQHLKDRLMTQKSEVTKAQSEIEEARKI
LLALNKEAGKLQREATAIEASLEQKRLGRHNRLLECKVQDLRIDLLWGSLDEVSEIELGS
EIESTQMTADIYEREGAIQIDYSGLAEDLKDLQSDGEIEAHLKQLQQQAASKENILLRTA
APNLRALNKLQIVKDKFQESVDAFEASRKEARLCRHGFEQVKKRRYELFRKCFEHVSVAI
DQIYKKLCRNSSAQAFLCPENPEEPYLGGISYNCVAPGKRFMPMDNLSGGEKTMAALALM
FAIHSFCPAPFLILDEVDAALDNTNIGKVSSFIKEQAQEQFQMIVISLKEEFYSRADALI
GVCPEQDDFMFSRVFTLDLTAYSDTEDNERRKKQRQSSTLD
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccatgggttacctgaagctgctgacgatggagaacttcaagtcgtggcggggt
cgccagagcgtcgggcccttcatgcgcttcacctgcgtcatcgggcccaacggctcaggc
aaatcaaacctaatggatgcccttagttttgtgatgggtgaaagaacagctaacttacga
gtgaaaaacattcaagaacttattcatggcgcacatgttggaaaacctgtttcttccgtt
gcaagtgtaaaaatggtatattgtgaagagaatggaaaagaaaaaacatttgcgagaatt
attcaaggaagttcttctgaatttcttttcaatgataaacctgtcagccaatctgtttac
acagctgagcttgaaaaaataggcataattgtcaaagcaaggaactgcctggtttttcag
ggagaagtagagtcgattgcaatgaagaaacccaaagaaagaactcaactttttgaacaa
attagtaattcacgggggctgactgaggaatatgagaaaaagaagaagaaaatgcagcag
gcagaccaggacacacagtttaattttaaccagaaaaaaaatgcagcagctgaacgcaag
catgcaaagttagaaaatgaggaggcagagcgttaccagatgctgcttggagagctgaaa
gaaaacaggatacaactgcagctcttccaactttatcacaatgagaaaaaaattgaattt
ctgcagaataaattggatgaaaagaatacggagatacgtagcaagaaagactccctttct
aatgctgaagatacctttaaagccaagaaaaaagtatgtggtatactaaatagagaccag
cagagcatagaaaaaaaaatgaaaactgtggaagcatccttgtctcagaagaggccccga
tacattaaagcaaaggaaaatacttctcaccaaatcaaaaaagtagatatggctaagaaa
tgcttgaaggacaacgagaaacagtatggtgcacaaaagcaaggcatacaagaaatggag
atagagctggctgatattgagacagcatgggcaacatttaaaaagaaagttgaggaagag
atggtacaaagaggaacagatattgaactggaagaaagtcagctggatcggtataaacag
ctaaaagaactagtaagaaagaaagtagctacactgatgcagcagttagaaaaacttcag
tgggaacagaaagcagatcaagaaaaaatggcacttgaccagaggaagcaaaaagaaatt
gaggaaagtataaaacaagttgaggaacagatagaagatcacaaaaaaagaatagaaaag
ttggaggagtataccaaagcatgcactgactcgctaacagagaaaaggaagcaggaagaa
accctaactgcagaaattgagaattcaagaattcgaatggcagaagtcaatgaagaacta
aataaactatatgatgagctacaaaatgctagaatagattaccacgaaggaaagcgccag
caaatgagagcagagatcctggaaagtctcaaacgactctaccctgattctgtgtttgga
aggctgcttgatttatgtcatcctattcataaaaagtatcagctggctgttactaaagtc
tttggcagctacatgaatgccattgttgtgaccactgaaaaaattgcaaggaactgcatt
cgattcctaaaggaggaaagagttgagcctgaaacatttcttgctttggattaccttgat
attaagccaatcaatgaaaagttaagggagttaaaaggatctaaaatgatgatcgatgtt
gttcaaactccattggcttcactgaaaaaagtgcttcagtttgtatgtgggaacagcctg
gtctgtgaaactattaaagaagcaaaacaaatagcatttgatggacctttgaggttgaaa
acagtagctcttgatggaactctgtttttaaaatctggagtgatttctggaggatcaagt
gatttgagatttaaagctagacgttgggatgaaaaagacattaataaaatgaaagaaaag
agagataatttggctaatgaactaaaggaattgatgaagatcagacgtaaggagacagat
ttgaagcagttgcaggctcagtgccaaggaactcagactcggctcaaatattcacaaagt
gaattagagattcttaaaaagaaacagcttgctaatttctataaggaaaagtctaaactg
gaaagtgaattagtaaatatcaaatcagaatgtgctatgctaaatgaaggacttgcacaa
agagtaaggaaaatggaagagtttcagaagaaaataaatgaggttgaagatagtatattc
caggagttctgtgaagagattggggtagaaaatatacgtgtgtatgagcaagagcatgtg
aaacagcaggaggaaatcgataggaaaagactggaatttgaaaaccagaagacacgattg
agcattcagcttgaatttagtcgtggtcagcttcagaaacagattaacaaaatcagtgca
ttgaaagaggcagttcataaagatgaggctgagattgtcaacctgaagaaggatgaagaa
aaatgtctactaatggtgaatgaagtaatggaagaacagcagcaccttaaggatagatta
atgacccaaaaatctgaggttacaaaagcacaaagtgaaattgaggaagccaggaagata
ttactagctcttaataaggaagcagggaaattacaaagggaagctacagctattgaagcc
tctctggaacagaaaaggttagggagacataataggcttcttgaatgcaaggtccaagac
ttgagaattgatctcctgtggggatcactggatgaagtcagtgaaattgagctaggatcg
gaaatagaaagcactcagatgacagcagatatctatgaaagagaaggtgcaattcaaata
gactacagcggtctagcagaagatctaaaggacctacagtctgatggagagattgaggct
catctgaaacaactgcaacagcaagcagcatcgaaagagaatattttgttaaggacagct
gcaccaaacctaagagcactgaataaattgcagattgtgaaggacaagttccaagaatca
gtagatgcatttgaggccagtagaaaagaagccaggctatgtagacatggatttgaacag
gtgaaaaagaggagatatgaacttttcaggaaatgttttgagcatgtctcagtagctatt
gatcagatctacaagaaactctgtagaaacagtagtgctcaggcattcctttgtcctgag
aatcctgaggaaccttacctaggtggtattagctataactgtgtggctcctggaaaacgc
tttatgccaatggacaacttgtctggaggtgaaaaaaccatggcagcattggctctcatg
tttgctatacacagtttctgcccagccccttttcttattttggatgaggtagatgcagca
ctggataatacaaatattgggaaagtatcaagcttcattaaggaacaggcacaggaacaa
tttcagatgatagttatttctctaaaggaagaattttattccagagcagatgcattaatt
ggagtctgtccagagcaagatgacttcatgtttagtcgggtgttcacacttgatctcact
gcatattcagatactgaggacaatgaaagaagaaagaaacagagacagagctccacactg
gactaa
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