Alligator mississippiensis (American alligator): 102570399
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Entry
102570399 CDS
T03087
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta
KO
K08528
retinoic acid receptor beta
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102570399 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
102570399 (RARB)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102570399 (RARB)
Nuclear receptors [BR:
amj03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
102570399 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102570399
NCBI-ProteinID:
XP_006264344
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All DBs
Position
Un
AA seq
448 aa
AA seq
DB search
MFDCMDVLAVSPGQMLDFYTASPSSCMLQEKALKACFSGLAQTEWQHRHSAQSVETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRD
KNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQESTEHYEMTAELDDL
TEKIRKAHQETFPSLCQLGKYTTNSSAEHRVRLDLGLWDKFSELATKCIIKIVEFAKRLP
GFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPAKVDKLQEPLLEALKIYIRKRR
PNKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSS
SGNTAEHSPSISPSSVDNSNVSQSPMVQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgtgctagcagtgagtcctggtcaaatgctggatttctacact
gcgagtccgtcttcctgcatgctccaggagaaggctctgaaagcatgcttcagtggattg
gcacaaacagagtggcaacaccggcacagtgctcaatcagttgaaactcagagcaccagt
tctgaggaacttgttccaagcccaccgtctccacttcctcccccacgtgtttacaagccg
tgttttgtctgtcaagacaagtcatctggatatcactatggcgtcagtgcttgtgaggga
tgtaagggttttttccgaagaagtattcagaagaacatggtttacacatgtcatagagat
aaaaactgtgttattaataaagtcactagaaatcgctgccagtactgcagactacaaaag
tgctttgaagtgggaatgtccaaagaatctgtcagaaatgacaggaacaaaaagaagaag
gagccttcaaagcaggagtccacagaacactatgaaatgacagcagagttggatgatctc
actgagaaaatccggaaagcgcaccaggaaaccttcccttcactgtgccagctgggaaaa
tacactacgaactctagcgcagaacatcgggttcgactggaccttgggctttgggacaaa
ttcagcgaactggctacaaagtgcattattaaaatagtggaatttgcaaaacgactgcct
ggctttacaagcttgaccattgcagaccaaataactctccttaaagcagcctgcctggac
atattgatccttagaatttgcacaagatacaccccagagcaggacacgatgacattttct
gatggccttaccctaaaccgaactcagatgcacaatgctggatttggtccattaactgac
cttgtgttcacatttgccaatcagctcctgcctttggaaatggatgacacagaaacaggc
ctacttagtgccatctgcttaatctgtggagaccgccaggaccttgaagaaccagcaaaa
gtagataaactacaagaaccgttgctggaagcattgaaaatttacatccgaaagagacga
cccaacaagcctcacatgtttccaaagatcctaatgaaaatcacagatcttcgcagtatc
agtgcaaaaggggcagaacgtgtgattacactgaaaatggaaatccctggatcaatgcct
cctctcattcaggaaatgttggagaactctgagggacatgaaccactgacaccaagctca
agtggaaacacagcagagcacagtcctagcatctcacctagctcagtggataacagcaat
gtcagtcaatctccaatggtgcaataa
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