Alligator mississippiensis (American alligator): 102570502
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Entry
102570502 CDS
T03087
Symbol
THOC2
Name
(RefSeq) THO complex 2
KO
K12879
THO complex subunit 2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102570502 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
102570502 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102570502 (THOC2)
03041 Spliceosome [BR:
amj03041
]
102570502 (THOC2)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102570502 (THOC2)
Spliceosome [BR:
amj03041
]
Complex C
Other components
EJC/TREX
102570502 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102570502 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
102570502
NCBI-ProteinID:
XP_014462671
LinkDB
All DBs
Position
Un
AA seq
1597 aa
AA seq
DB search
MAAAAAALPADWIKNWEKAGKSEFLQLCRTLSDSKSHDMNFRADIQQALYELAYHVVRGN
LKHDQAANVLSDVIEFREDMPSILADVFCILDIETGCLEEKSKRDHFTQLVLACLYFVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCE
PQTLCHILGFKFKFYQEPNGETPCSLYRVAAVLLQHNLIDLEDLYVHLLPVDNAILEEHK
REIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQH
AQSIMDQMPPFYATSHKSIAIALCRLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQ
AESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEEKEKMEILF
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGN
KQQHKVHKYITSCEIVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHNSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEK
DSWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEFHHKDPPARNAVAAT
VQNGPGGAGLPASLAVNTAKLEESTAEETDKLKEKSQGAMKIISKAVNTTPKVTTSNGNS
ASNSKVIKEKEDKEKGGKEKDKEKKEKTPAATPEAKALGKDGKDKPKEERAIKDDKARET
KEKTPKSDKEKEKIKKEEKTPKDEKSKTVVISIESKSAAEKEREKEPSRERDVAKDMKSK
ENIKGGEKMPVVGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLSELKDSSA
KHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVQQDS
TKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSG
SKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcgctccctgccgactggataaagaactgggagaaggcgggc
aagagcgagtttttgcagctatgccgcactctcagtgacagtaaaagccatgatatgaat
ttcagagcagacatccagcaggctctatatgagcttgcatatcatgttgtcaggggaaac
ctaaagcatgaccaagctgctaatgttctcagtgatgtcatagaatttcgggaagatatg
ccctccattcttgctgatgtattctgcatattagatattgaaacaggttgtttagaagaa
aaaagcaagagagatcattttacacaactggtgttagcttgtttgtacttcgtttcagac
actgtcctaaaggagcgactagacccagaaacattggaatctttaggacttatcaagcaa
tctcagcagttcaatcagaaatctgtcaaaatcaagaccaaacttttttataagcagcag
aaatttaatctcttaagagaagagaatgaaggctatgcaaaactgattgctgaactggga
caagatttatctggaaatatcaccagtgatttaatcctagaaaatatcaaatctttaata
ggatgttttaacctggatcccaacagagttttggatattatcttggaggtgtatgagtgc
aggccggagtatgatgatttctttgtaccactgatagagtcttacatgtatatgtgtgaa
cctcaaaccctctgtcatatccttgggtttaaattcaaattttatcaggaaccaaatggc
gagacaccctgctccttatacagagtcgctgcagtgcttttgcaacataatcttatagat
ttggaagatctttatgtacatcttcttccagtagataatgccattctcgaagaacacaaa
cgagagattgtggaagctaagcagattgttagaaaacttacaatggtggttttatcttct
gaaaagactgaagagaaagagaaggaaaaggaaaaggaagaggagaaaactgaaaagcca
cctgacaaccagaaacttggcttattggaagctttattaaaaattggcgactggcagcac
gcacagagtattatggatcagatgcctccattttatgccacttcacacaaatctattgcc
attgccctctgccggcttgtacatgtgaccattgaacctctgtaccggagagttggagta
cctaaaggggctaaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaa
gcagaaagctttgaagacttgagaaaggaagtgttcaacatgctttgttatcttggtcct
catctttcccatgatcccattctttttgcaaaagtggtacgcttgggaaaagcatttatg
aaagagtttcagtctgatggaagcaaacaagaggaaaaagagaaaatggagattttgttt
agctgtttgttaagtattaccgaccaagtgttgcttccatctctttctttgatggactgt
aatgcatgtatgtccgaggaactctggggaatgttcaaaacttttccataccagtaccgg
tatcgtctctatggacagtggaagaatgaaacatacaacagccacccacttttagtgaaa
gttaaagctcaaactatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagctgagtcacagcaatccaactatcttattt
gattatattttatcacagatacagaagtatgataatttaataacaccagtcgttgattca
ttgaaatacctcacttcactgaactatgatgtcttggcatattgcatcattgaagcactg
gcaaatcctgagaaggaaagaatgaagcatgatgacactacaatctctagctggctgcaa
agtctagctagtttttgtggtgcagtttttcgaaagtatccaattgaacttgctggcctt
cttcagtatgtggcaaaccaattaaaagctgggaaaagctttgatttgcttattttaaaa
gaggtggtacaaaaaatggctggaatagaaattacagaagagatgacaatggagcagcta
gaggccatgactggtggcgaacagctaaaagctgagggtggatattttggccagatcaga
aacacaaaaaaatcttctcagagattgaaagatgcattattggaccatgatcttgccctt
ccactgtgtctgctgatggctcaacagcgaaatggtgtgatctttcaggaaggaggagag
aaacatctgaagttggtaggaaagctgtatgatcagtgccatgatactctggtacagttt
ggtgggtttttagcatccaatctaagcacagaagattacattaagcgagtgccttctatt
gatgttctctgtaatgaatttcacacaccccatgatgctgcatttttcctgtcaaggcct
atgtatgcacatcatatttcgtcaaaatatgatgaacttaaaaaagccgaaaaggggaat
aaacagcagcacaaagttcacaaatacatcacatcgtgtgagatagtcatggctcctgtt
catgatgctgtgatctccttgcaccttcccaaggtttgggatgacatcagtccacagttc
tatgctacgttctggtcactgacaatgtatgaccttgctgttccgcataacagctatgag
agagaagtcaataaacttaaagtacagatgaaagctatagatgacaatcaggaaatgcct
ccaaataaaaagaagaaagagaaagaacgttgtacagctcttcaggacaagcttctcgag
gaggaaaagaaacagttggagcatgtgcagagggtgctacagaggctgaaactggaaaag
gatagttggcttttggcaaagtctaccaaaaatgaaactatcacaaaatttctacagctg
tgtatatttcctcggtgcattttttctgcaattgatgctgtttactgtgctcactttgta
gaactagtacatcaacagaaaactcccaatttttccacacttctctgttatgatagagtt
ttctctgatataatctatacagtagcaagttgcactgaaaatgaagccagtagatatggc
aggtttctatgctgcatgctagagactgtaactagatggcacagtgatagagtcatatat
gaaaaggaatgtggcaactacccaggttttcttaccatcttacgggcaactgggtttgat
ggtggaaacaaagctgaccagttagattatgagaattttcgacatgtcgtccacaaatgg
cactataaactaacaaaggcttctgtacactgccttgaaacaggagaatatacacatatc
agaaatatcttgattgtgttgaccaaaatccttccgtggtatccaaaagtgctgaatctg
ggccaagccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacct
gatctatatgcattggctatgggctattcggggcagttgaaaagtagaaagccttatatg
gtacctgaaaatgaattccatcacaaagaccctcctgccaggaatgctgtagctgcaaca
gtgcaaaatgggccaggtggtgctgggctgcctgcatcactcgcagttaatacagctaaa
ctggaagaaagcactgctgaggagactgataaattaaaggagaaatctcagggtgctatg
aaaattattagtaaagcagtcaatacaacacctaaggtgacgacaagcaacggaaacagt
gcttctaatagcaaagttattaaagaaaaagaagacaaagaaaaaggtgggaaggaaaaa
gataaagaaaaaaaagaaaagactccagctgccactccagaggccaaggcacttggaaag
gatgggaaagataaaccaaaggaagaacgggcaatcaaagatgataaagcaagagagacc
aaggaaaaaacaccaaagtctgacaaagagaaagaaaaaatcaagaaagaagagaaaacc
ccgaaagatgaaaaatccaagacagttgttatcagcattgagtcaaagtcagctgctgaa
aaggagagagaaaaggagccgtccagagaaagagatgtagcgaaggatatgaaatccaag
gaaaatattaaaggaggagaaaagatgccagtagttgggtccttgaagtcacctgttccc
cgatcagaaacatcagaatctgaaagggaacaaaaacgccgcaaagttgatacccattct
tctccatcacattcctcaacagtaaaggacaacctcagcgaactcaaggactcttcagca
aagcactacattaaccacactactccaacattgtccaagagtaaggagagagaagtggac
aagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaag
gacaggaaagatcggaaaagggatcattcaaatagtgatcgggaggtgcagcaagattca
accaaaaggcgcaaagaggaaaatggaacaactggttcttccaaacatagtaaaagtgaa
agtccctctgactcacctcgttcaaatgaaaaggaaaaggaaaagaacaaatcaaaatct
tcagggaaagaaaaaggtgattcgatcaaagccgaaaagatggaaaaaagttcctctggt
agcaaaaaggagtccagacatgataaagaaaaaacagaaaaaaaagaaaagcgggacagc
acgggagggaaagaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
