Alligator mississippiensis (American alligator): 102570563
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Entry
102570563 CDS
T03087
Symbol
TRAF7
Name
(RefSeq) TNF receptor associated factor 7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102570563 (TRAF7)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102570563 (TRAF7)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
102570563 (TRAF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_IP5PC_F
zf-RING_UBOX
Beta-prop_SPT8
Beta-prop_DCAF4
zf-C3HC4
zf-C3HC4_2
zf-TRAF
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
zf-C3HC4_4
Sina_ZnF
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
zf-C3HC4_3
WD40_MABP1-WDR62_1st
zf-RING_5
Beta-prop_LRRK2
PKcGMP_CC
WDR90_beta-prop_4th
DUF641
MIOS_WD40
Filament
DUF16
U-box
KxDL
DUF4164
Motif
Other DBs
NCBI-GeneID:
102570563
NCBI-ProteinID:
XP_019351235
UniProt:
A0A151MY30
LinkDB
All DBs
Position
Un
AA seq
670 aa
AA seq
DB search
MSSNKSARYNRFSSGATSITTSENTNGTRMETTFGPAYSAVTTITKADGANTFKQHRRTP
SSSSTLTYSPRDEDDGMPPIGTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKPTAFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEMCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNRLYSGSADCTIIVWDIQTLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaacaagagcgctcgctacaatcgtttctccagcggcgcgacaagcatcact
acttccgagaacactaacgggacgagaatggaaaccacttttggacctgcctattctgct
gtcacgaccatcacgaaagcggatggggccaacaccttcaagcagcaccgccggacacca
tcatcgtccagcaccctcacctactcgccccgggatgaggacgatggcatgcctccgatt
ggcaccccccggcggtctgactcggcgatctccgtccgctcgctgcactccgagtccaac
atgtccttgcgctcgacgttctcgctgcacgaggaagaggaggagccagagcccttggtg
tttgctgagcagccgtcagtgaagctttgctgccagctgtgctgcagcgtattcaaagac
ccagtcatcacgacgtgcgggcacacgttttgcagaagatgtgccttaacatctgagaag
tgccctgtggacaatgccaaactgacggtggtcgtgaacaacattgctgtggccgagcag
atcggggagctgttcatacactgcaaatatggctgccggcccgctgccagcagcaagccc
accgccttcgaggtggacccccgcgggtgcccgtttacaattaaactgagtgccaggaaa
gatcacgaaagcagctgtgactacaggccagtgcgatgccccaataaccccagctgccca
cctctcctgaaaatgaacctggaggcacatctcaaggagtgcgagcacatcaagtgtcct
cactccaaatacgggtgcacgttcattgggaaccaagacacgtacgagacgcacctggag
atgtgcaagttcgagggcctgaaggagttcctgcagcagacggacgaccgcttccatgag
atgcaggtggctatggcgcaaaaggaccaggagatcgccttcctgcgctccatgctgggc
aagctctcagagaagatcgaccagctggagaaaaacctcgagctcaagtttgatgtgctg
gacgagaaccagagcaagctgagcgaggacctgatggagttccgcagggatgcctccatg
ctaaacgatgagctctcgcacatcaacgctcggctcaacatggggatcctgggctcctat
gatcctcagcagatcttcaagtgcaagggcacttttgtgggacaccagggccccgtgtgg
tgtctgtgcgtttactccattggagacttgcttttcagtggctcttcggacaaaaccatt
aaggtgtgggatacctgtaccacgtacaagtgccaaaagaccttggagggtcatgatgga
attgtactagctctctgcattcaggggaacaggttgtacagcggctcggcggactgcacc
atcattgtctgggatatccaaaccctgcagaaggtgaacaccatccgagcccacgacaat
cccgtctgcacgctggtctcctcacacaacatgctgttcagcggctccctcaaagccatc
aaggtctgggacatcgtcggcactgagctgaagctgaagaaggagctgacgggtctgaac
cactgggtgcgagcgctcgtggcctcgcagaactatctctacagcgggtcataccagaca
atcaagatctgggacatccggaacctggagtgcgtccacgtgctgcagacgtcggggggc
agcgtctactccatcgccgtgacgaaccaccacatcgtgtgcggcacctacgagaacctc
atccacgtctgggatatcgagtccaaggagcaggtgcggacgctgactgggcatgtgggc
acggtgtatgccctggccgtcatctccacacccgaccagaccaaagtcttcagcgcctcc
tatgaccggtctctcagggtgtggagcatggacaacatgatctgcacgcagacgctgctg
cgccaccagggcagcgtgacagccctcgccgtctcccggggccgcctcttctccggggct
gtggacagcacggttaaggtctggacgtgctaa
DBGET
integrated database retrieval system
