Alligator mississippiensis (American alligator): 102570582
Help
Entry
102570582 CDS
T03087
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specific factor 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102570582 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102570582 (CPSF4)
03019 Messenger RNA biogenesis [BR:
amj03019
]
102570582 (CPSF4)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102570582 (CPSF4)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102570582 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
GAF_PdtaS
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
102570582
NCBI-ProteinID:
XP_006272750
LinkDB
All DBs
Position
Un
AA seq
269 aa
AA seq
DB search
MQELIASVDHIKFDLEMAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPQPTQTQQKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNNAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggaccacatcaagttcgacctggagatggcggtggag
cagcagctgggcgcgcagcccctgcccttccccggcatggacaaatcgggggctgccgtc
tgtgaattttttttaaaagctgcctgcggaaaaggaggcatgtgccccttccggcacatc
agcggggaaaagacagtcgtttgcaaacactggctgcgagggctgtgcaaaaagggagac
cagtgcgagttcctgcacgaatatgacatgaccaagatgcccgagtgttatttctactcc
aaattcggggaatgcagtaacaaggaatgtcccttcttgcatatcgacccagagtctaaa
atcaaagactgtccttggtatgacagaggcttctgcaaacatggtcccctctgcagacat
cgacacactcgacgggtcatttgtgtgaattacctggtgggattctgtccggagggtccc
acttgcaaatttatgcaccctcgatttgaattgcctatgggaacaacagaacaaccgcca
ctgccccagccaacgcaaacacagcaaaagcaaaataacaatccgccattacaaaggtca
tcatccttgatccagttaacgagtcagaactcttctcccaaccagcagaggaccccacaa
gtcatcggagtcatgcagtctcaaaacaacaacgcggggaacagaggtccccggccgctg
gagcaggtcacctgttacaagtgtggtgaaaaaggacattacgccaacagatgtaccaaa
ggacatctagcctttctcagtggacagtga
DBGET
integrated database retrieval system
