Alligator mississippiensis (American alligator): 102570790
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Entry
102570790 CDS
T03087
Symbol
EXOSC8
Name
(RefSeq) exosome component 8
KO
K12586
exosome complex component RRP43
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102570790 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102570790 (EXOSC8)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102570790 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102570790
NCBI-ProteinID:
XP_006267502
LinkDB
All DBs
Position
Un
AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITTADGSALVKLGNTTVIC
GIKAEFAAPPVDATNKGYIVPDVDLPPLCSARFRPGPPGEEAQAVSQFIADVIENSQIIM
KEDLCIVNGKLAWVLYCDIICLDYDGNILDACTFALLAALNNVQLPAVAINEETGLAEVN
LKQKTPLNIRKYPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLCSVHKPGG
SPLTGAKLQDCITRAITRHKEVKQLMDKVIKSVKPQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggattcaaaactgtggaacctttggagtattacagaagatttttgaaagag
aactgccgtcctgatggaagagagttaggtgaattcagagcgaccactgtcaacataggt
tccattactactgcagatggctctgccttagtgaagctgggaaataccacagtaatatgt
ggtatcaaagcggagtttgcagcacctccagttgatgccacaaataagggatacattgtt
cctgatgtggatctcccacccctctgctcagcaagatttcgtcctggccctccaggggaa
gaggctcaggcagttagccagtttattgcagatgtgattgaaaactcacagataataatg
aaagaagatctgtgtattgtgaatggcaagcttgcttgggtgctatactgtgacatcata
tgcttggactacgatggaaacattttagatgcctgcacatttgctttgttagcagcttta
aacaatgtacagttaccagcagttgctataaatgaagaaactggtttagcagaagttaac
ttaaaacagaagactcctttgaatatcaggaagtatccagttgctacatcgtttgctata
tttgatgacacattactcattgttgatccaactgcagaagaggaggatctggcaactgga
actgtaacaattgtaactgatgaagaaggcaggctgtgttccgttcataagccaggtgga
agtcccctgactggagcaaaacttcaggactgtattacccgggcaattacaagacacaaa
gaagtgaagcagctgatggacaaagtgataaaaagcgtaaaaccacaataa
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