Alligator mississippiensis (American alligator): 102571329
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Entry
102571329 CDS
T03087
Symbol
RAE1
Name
(RefSeq) ribonucleic acid export 1
KO
K14298
mRNA export factor
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102571329 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102571329 (RAE1)
03036 Chromosome and associated proteins [BR:
amj03036
]
102571329 (RAE1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102571329 (RAE1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102571329 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Nup120_160
ExoI_SH3
Beta-prop_SPT8
PepSY
Motif
Other DBs
NCBI-GeneID:
102571329
NCBI-ProteinID:
XP_014465211
UniProt:
A0A151NZ83
LinkDB
All DBs
Position
Un
AA seq
368 aa
AA seq
DB search
MSLFGSTSGFGTGGTSMFGSTAADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYNCIMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVY
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQAISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcttcggatccacctcgggcttcggcaccggcggcaccagcatgttcggcagc
accgccgcggacaaccacaaccccatgaaggatattgaagttacgtctccacctgatgac
agcatttcttgtttagctttcagtcccccaacattgccgggtaacttccttattgcagga
tcctgggcaaacgatgttcggtgttgggaagttcaagatagtggacaaacaattccgaag
gctcagcagatgcacacagggcctgtgctagacgtgtgttggagtgatgacgggagtaaa
gtttttactgcttcctgtgacaaaactgccaaaatgtgggatctcaacagtaatcaagcc
atccagattgcacaacatgatgcccctgttaaaacaatccattggattaaagcaccaaac
tacaactgcataatgacaggaagttgggataaaactttaaagttctgggatacacgatca
ccaacacctatgatgaccttacaactgcctgaaagatgttactgtgctgatgtggtatac
cccatggcagcagtagccactgcagaaaggggcttgatagtttatcagctagagaatcag
ccttctgagtttagaagaatagaatctccacttaaacaccagcatcgctgtgttgctatt
tttaaagacaaagtcaacaaacctactggattcgcccttggaagtattgaaggaagagta
gctattcactatatcaacccccccaatccagccaaagataacttcacttttaaatgtcat
cgctccaatggaacaaacacatcagcacctcaggatatttatgctgtaaatgggatagcg
tttcatcctgcccatggcacccttgcaactgtaggatctgacggtagattcagcttttgg
gataaagatgcacgaacaaagctaaaaacatcagaacaactagatcaggcaatatctgcc
tgttgtttcaaccacaatggaaatatctttgcctatgcttccagttatgactggtcaaag
ggccatgaattttataatccacaaaagaagaactatatttttctgcgtaatgcagcagaa
gagttaaagcctaggaataagaagtag
DBGET
integrated database retrieval system
